RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 ISCA1Q9BUE6 129 aa18.31■□□□□ 0.52
HDDC2-202ENST00000398153 ARFGEF2Q9Y6D5 1785 aa18.31■□□□□ 0.52
HDDC2-202ENST00000398153 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
HDDC2-202ENST00000398153 YY1P25490 414 aa18.3■□□□□ 0.52
HDDC2-202ENST00000398153 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
HDDC2-202ENST00000398153 ALDH1B1P30837 517 aa18.29■□□□□ 0.52
HDDC2-202ENST00000398153 CRY2Q49AN0 593 aa18.29■□□□□ 0.52
HDDC2-202ENST00000398153 ERFEQ4G0M1 354 aa18.29■□□□□ 0.52
HDDC2-202ENST00000398153 TRMT2AQ8IZ69 625 aaKnown RBP18.29■□□□□ 0.52
HDDC2-202ENST00000398153 CCDC24Q8N4L8 307 aa18.29■□□□□ 0.52
HDDC2-202ENST00000398153 ZNF622Q969S3 477 aaKnown RBP eCLIP18.29■□□□□ 0.52
HDDC2-202ENST00000398153 CT47B1P0C2W7 299 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-202ENST00000398153 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
HDDC2-202ENST00000398153 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
HDDC2-202ENST00000398153 NLRP3Q96P20 1036 aa18.28■□□□□ 0.52
HDDC2-202ENST00000398153 METTL22Q9BUU2 404 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-202ENST00000398153 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
HDDC2-202ENST00000398153 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-202ENST00000398153 SH3TC1Q8TE82 1336 aa18.27■□□□□ 0.52
HDDC2-202ENST00000398153 NEXNQ0ZGT2 675 aa18.27■□□□□ 0.52
HDDC2-202ENST00000398153 FLIIQ13045 1269 aa18.27■□□□□ 0.52
HDDC2-202ENST00000398153 SOGA3Q5TF21 947 aa18.27■□□□□ 0.52
HDDC2-202ENST00000398153 CCDC191Q8NCU4 936 aa18.27■□□□□ 0.52
HDDC2-202ENST00000398153 WWC3Q9ULE0 1092 aa18.27■□□□□ 0.52
HDDC2-202ENST00000398153 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
HDDC2-202ENST00000398153 HOXA10P31260 410 aaPredicted RBP18.26■□□□□ 0.51
HDDC2-202ENST00000398153 ARHGAP27Q6ZUM4 889 aa18.26■□□□□ 0.51
HDDC2-202ENST00000398153 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
HDDC2-202ENST00000398153 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
HDDC2-202ENST00000398153 ABCC12Q96J65 1359 aa18.26■□□□□ 0.51
HDDC2-202ENST00000398153 ATP5J2-PTCD1G3V325 749 aa18.24■□□□□ 0.51
HDDC2-202ENST00000398153 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
HDDC2-202ENST00000398153 FKBP5Q13451 457 aaPredicted RBP18.24■□□□□ 0.51
HDDC2-202ENST00000398153 RPGRQ92834 1020 aaKnown RBP18.24■□□□□ 0.51
HDDC2-202ENST00000398153 MYD88Q99836 296 aa18.24■□□□□ 0.51
HDDC2-202ENST00000398153 ADCY9O60503 1353 aa18.24■□□□□ 0.51
HDDC2-202ENST00000398153 TNRC6CQ9HCJ0 1690 aaKnown RBP18.23■□□□□ 0.51
HDDC2-202ENST00000398153 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
HDDC2-202ENST00000398153 G2E3Q7L622 706 aa18.23■□□□□ 0.51
HDDC2-202ENST00000398153 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
HDDC2-202ENST00000398153 CDCA7LQ96GN5 454 aa18.23■□□□□ 0.51
HDDC2-202ENST00000398153 RBM17Q96I25 401 aaKnown RBP18.23■□□□□ 0.51
HDDC2-202ENST00000398153 CRAMP1Q96RY5 1269 aa18.23■□□□□ 0.51
HDDC2-202ENST00000398153 CWC25Q9NXE8 425 aaPredicted RBP18.23■□□□□ 0.51
HDDC2-202ENST00000398153 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
HDDC2-202ENST00000398153 GRIPAP1Q4V328 841 aa18.22■□□□□ 0.51
HDDC2-202ENST00000398153 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
HDDC2-202ENST00000398153 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
HDDC2-202ENST00000398153 CC2D2BQ6DHV5 1058 aa18.21■□□□□ 0.51
HDDC2-202ENST00000398153 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
HDDC2-202ENST00000398153 FAM89AQ96GI7 184 aa18.21■□□□□ 0.51
HDDC2-202ENST00000398153 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
HDDC2-202ENST00000398153 C21orf2O43822 256 aa18.2■□□□□ 0.5
HDDC2-202ENST00000398153 LINS1Q8NG48 757 aa18.2■□□□□ 0.5
HDDC2-202ENST00000398153 C7orf43Q8WVR3 580 aa18.2■□□□□ 0.5
HDDC2-202ENST00000398153 LTBP3Q9NS15 1303 aa18.2■□□□□ 0.5
HDDC2-202ENST00000398153 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
HDDC2-202ENST00000398153 HCLS1P14317 486 aaPredicted RBP18.19■□□□□ 0.5
HDDC2-202ENST00000398153 SF3B3Q15393 1217 aaKnown RBP18.19■□□□□ 0.5
HDDC2-202ENST00000398153 CDHR2Q9BYE9 1310 aa18.19■□□□□ 0.5
HDDC2-202ENST00000398153 CACNA1SQ13698 1873 aa18.18■□□□□ 0.5
HDDC2-202ENST00000398153 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
HDDC2-202ENST00000398153 DDX60Q8IY21 1712 aaKnown RBP18.18■□□□□ 0.5
HDDC2-202ENST00000398153 LAMB2P55268 1798 aa18.18■□□□□ 0.5
HDDC2-202ENST00000398153 NEURL1BA8MQ27 555 aa18.18■□□□□ 0.5
HDDC2-202ENST00000398153 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
HDDC2-202ENST00000398153 BBOX1O75936 387 aa18.18■□□□□ 0.5
HDDC2-202ENST00000398153 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
HDDC2-202ENST00000398153 RTKN2Q8IZC4 609 aa18.18■□□□□ 0.5
HDDC2-202ENST00000398153 PTPRCP08575 1304 aa18.18■□□□□ 0.5
HDDC2-202ENST00000398153 ZC3H4Q9UPT8 1303 aaKnown RBP18.18■□□□□ 0.5
HDDC2-202ENST00000398153 LMNB1P20700 586 aa18.17■□□□□ 0.5
HDDC2-202ENST00000398153 BRPF1P55201 1214 aaPredicted RBP18.17■□□□□ 0.5
HDDC2-202ENST00000398153 DDX46Q7L014 1031 aaKnown RBP18.17■□□□□ 0.5
HDDC2-202ENST00000398153 TMC4Q7Z404 712 aa18.17■□□□□ 0.5
HDDC2-202ENST00000398153 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
HDDC2-202ENST00000398153 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
HDDC2-202ENST00000398153 SBF1O95248 1867 aa18.17■□□□□ 0.5
HDDC2-202ENST00000398153 ZBED9Q6R2W3 1325 aa18.17■□□□□ 0.5
HDDC2-202ENST00000398153 PDE8AO60658 829 aa18.16■□□□□ 0.5
HDDC2-202ENST00000398153 C3orf67Q6ZVT6 689 aa18.16■□□□□ 0.5
HDDC2-202ENST00000398153 SSH1Q8WYL5 1049 aa18.16■□□□□ 0.5
HDDC2-202ENST00000398153 TMX4Q9H1E5 349 aaPredicted RBP18.16■□□□□ 0.5
HDDC2-202ENST00000398153 H7C1W4 665 aa18.15■□□□□ 0.5
HDDC2-202ENST00000398153 NFKBIEO00221 500 aa18.15■□□□□ 0.5
HDDC2-202ENST00000398153 GCKRQ14397 625 aa18.15■□□□□ 0.5
HDDC2-202ENST00000398153 CWF19L2Q2TBE0 894 aaKnown RBP18.15■□□□□ 0.5
HDDC2-202ENST00000398153 C9orf131Q5VYM1 1079 aa18.15■□□□□ 0.5
HDDC2-202ENST00000398153 ZNF784Q8NCA9 323 aaPredicted RBP18.15■□□□□ 0.5
HDDC2-202ENST00000398153 TAOK3Q9H2K8 898 aa18.15■□□□□ 0.5
HDDC2-202ENST00000398153 GRAPQ13588 217 aa18.14■□□□□ 0.49
HDDC2-202ENST00000398153 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
HDDC2-202ENST00000398153 GRAPLQ8TC17 118 aaPredicted RBP18.14■□□□□ 0.49
HDDC2-202ENST00000398153 ABCC4O15439 1325 aa18.14■□□□□ 0.49
HDDC2-202ENST00000398153 PPEF1O14829 653 aaPredicted RBP18.13■□□□□ 0.49
HDDC2-202ENST00000398153 ALDH1L1O75891 902 aa18.13■□□□□ 0.49
HDDC2-202ENST00000398153 FKBP4Q02790 459 aaKnown RBP eCLIP18.13■□□□□ 0.49
HDDC2-202ENST00000398153 CCDC152Q4G0S7 254 aa18.13■□□□□ 0.49
HDDC2-202ENST00000398153 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
HDDC2-202ENST00000398153 PSMD1Q99460 953 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms