RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 LRP10Q7Z4F1 713 aa22.09■■□□□ 1.13
CHRFAM7A-202ENST00000397827 BOLA2Q9H3K6 86 aa22.09■■□□□ 1.13
CHRFAM7A-202ENST00000397827 TMEM63CQ9P1W3 806 aa22.09■■□□□ 1.13
CHRFAM7A-202ENST00000397827 DDX54Q8TDD1 881 aaKnown RBP22.09■■□□□ 1.13
CHRFAM7A-202ENST00000397827 DTNBO60941 627 aa22.08■■□□□ 1.13
CHRFAM7A-202ENST00000397827 PRIM1P49642 420 aaKnown RBP22.08■■□□□ 1.12
CHRFAM7A-202ENST00000397827 GDPD2Q9HCC8 539 aa22.08■■□□□ 1.12
CHRFAM7A-202ENST00000397827 ESPNB1AK53 854 aa22.07■■□□□ 1.12
CHRFAM7A-202ENST00000397827 ATP5J2-PTCD1G3V325 749 aa22.07■■□□□ 1.12
CHRFAM7A-202ENST00000397827 PTCD1O75127 700 aaKnown RBP22.07■■□□□ 1.12
CHRFAM7A-202ENST00000397827 CABP4P57796 275 aa22.07■■□□□ 1.12
CHRFAM7A-202ENST00000397827 CADPS2Q86UW7 1296 aa22.07■■□□□ 1.12
CHRFAM7A-202ENST00000397827 TRIM44Q96DX7 344 aaPredicted RBP22.07■■□□□ 1.12
CHRFAM7A-202ENST00000397827 JAKMIP1Q96N16 626 aaKnown RBP22.07■■□□□ 1.12
CHRFAM7A-202ENST00000397827 FMNL2Q96PY5 1086 aa22.07■■□□□ 1.12
CHRFAM7A-202ENST00000397827 TNS3Q68CZ2 1445 aa22.07■■□□□ 1.12
CHRFAM7A-202ENST00000397827 TPM2P07951 284 aa22.06■■□□□ 1.12
CHRFAM7A-202ENST00000397827 LIMCH1Q9UPQ0 1083 aa22.06■■□□□ 1.12
CHRFAM7A-202ENST00000397827 NMIQ13287 307 aaPredicted RBP22.06■■□□□ 1.12
CHRFAM7A-202ENST00000397827 ERBB4Q15303 1308 aa22.06■■□□□ 1.12
CHRFAM7A-202ENST00000397827 LARGE1O95461 756 aa22.05■■□□□ 1.12
CHRFAM7A-202ENST00000397827 UBE3BQ7Z3V4 1068 aa22.05■■□□□ 1.12
CHRFAM7A-202ENST00000397827 RBSNQ9H1K0 784 aa22.05■■□□□ 1.12
CHRFAM7A-202ENST00000397827 CCDC171Q6TFL3 1326 aa22.05■■□□□ 1.12
CHRFAM7A-202ENST00000397827 SYCE3A1L190 88 aa22.04■■□□□ 1.12
CHRFAM7A-202ENST00000397827 SPATA31A3Q5VYP0 1347 aa22.04■■□□□ 1.12
CHRFAM7A-202ENST00000397827 RPAP1Q9BWH6 1393 aaPredicted RBP22.04■■□□□ 1.12
CHRFAM7A-202ENST00000397827 HSPA2P54652 639 aa22.04■■□□□ 1.12
CHRFAM7A-202ENST00000397827 WDR33Q9C0J8 1336 aaKnown RBP22.04■■□□□ 1.12
CHRFAM7A-202ENST00000397827 NECTIN1Q15223 517 aa22.04■■□□□ 1.12
CHRFAM7A-202ENST00000397827 EDC3Q96F86 508 aaKnown RBP22.04■■□□□ 1.12
CHRFAM7A-202ENST00000397827 FSD1Q9BTV5 496 aa22.04■■□□□ 1.12
CHRFAM7A-202ENST00000397827 RBM8AQ9Y5S9 174 aaKnown RBP22.04■■□□□ 1.12
CHRFAM7A-202ENST00000397827 KCNJ4P48050 445 aa22.03■■□□□ 1.12
CHRFAM7A-202ENST00000397827 DCCP43146 1447 aa22.03■■□□□ 1.12
CHRFAM7A-202ENST00000397827 A0A0D9SFI3 127 aa22.03■■□□□ 1.12
CHRFAM7A-202ENST00000397827 COL9A3Q14050 684 aaPredicted RBP22.02■■□□□ 1.12
CHRFAM7A-202ENST00000397827 PDRG1Q9NUG6 133 aa22.02■■□□□ 1.12
CHRFAM7A-202ENST00000397827 TCHHQ07283 1943 aa22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 A0A087WZG4 1122 aa22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 GADD45BO75293 160 aaPredicted RBP22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 CCDC173Q0VFZ6 552 aa22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 MBD3O95983 291 aa22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 PTPN12Q05209 780 aaKnown RBP22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 CCDC83Q8IWF9 413 aa22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 ANP32BQ92688 251 aaKnown RBP22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 ZSWIM6Q9HCJ5 1215 aa22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 CYP46A1Q9Y6A2 500 aa22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 MRC1P22897 1456 aa22.01■■□□□ 1.11
CHRFAM7A-202ENST00000397827 RFX5P48382 616 aaPredicted RBP22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 CREB3L3Q68CJ9 461 aa22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 NDUFB9Q9Y6M9 179 aa22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 SYT1P21579 422 aa22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 TFCP2Q12800 502 aa22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 USP48Q86UV5 1035 aa22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 MAP4K1Q92918 833 aa22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 COPRSQ9NQ92 184 aa22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 SMC3Q9UQE7 1217 aa22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 ZSCAN21Q9Y5A6 473 aaPredicted RBP22■■□□□ 1.11
CHRFAM7A-202ENST00000397827 ZKSCAN1P17029 563 aaPredicted RBP21.99■■□□□ 1.11
CHRFAM7A-202ENST00000397827 TPRNQ4KMQ1 711 aa21.99■■□□□ 1.11
CHRFAM7A-202ENST00000397827 VPS53Q5VIR6 699 aa21.99■■□□□ 1.11
CHRFAM7A-202ENST00000397827 DBNLQ9UJU6 430 aaKnown RBP21.99■■□□□ 1.11
CHRFAM7A-202ENST00000397827 HIP1O00291 1037 aa21.99■■□□□ 1.11
CHRFAM7A-202ENST00000397827 LRSAM1Q6UWE0 723 aa21.99■■□□□ 1.11
CHRFAM7A-202ENST00000397827 KCNB2Q92953 911 aa21.99■■□□□ 1.11
CHRFAM7A-202ENST00000397827 PPP1R9BQ96SB3 815 aa21.99■■□□□ 1.11
CHRFAM7A-202ENST00000397827 PDE4CQ08493 712 aa21.99■■□□□ 1.11
CHRFAM7A-202ENST00000397827 STX6O43752 255 aa21.98■■□□□ 1.11
CHRFAM7A-202ENST00000397827 ZNF589Q86UQ0 364 aaPredicted RBP21.98■■□□□ 1.11
CHRFAM7A-202ENST00000397827 ZSCAN22P10073 491 aaPredicted RBP21.98■■□□□ 1.11
CHRFAM7A-202ENST00000397827 TOM1L2Q6ZVM7 507 aa21.98■■□□□ 1.11
CHRFAM7A-202ENST00000397827 TM6SF1Q9BZW5 370 aa21.98■■□□□ 1.11
CHRFAM7A-202ENST00000397827 TAF6LQ9Y6J9 622 aa21.98■■□□□ 1.11
CHRFAM7A-202ENST00000397827 AFDNP55196 1824 aaKnown RBP21.98■■□□□ 1.11
CHRFAM7A-202ENST00000397827 PKD1L3Q7Z443 1732 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 NBPF26B4DH59 902 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 TNNI3KQ59H18 835 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 NBPF14Q5TI25 921 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 NBPF10Q6P3W6 841 aaKnown RBP21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 NBPF15Q8N660 670 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 PRDM11Q9NQV5 511 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 FPGT-TNNI3KV9GXZ4 949 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 CPDO75976 1380 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 SLC27A2O14975 620 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 BRINP3Q76B58 766 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 PLBD2Q8NHP8 589 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 TCEANC2Q96MN5 208 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 CNPY2Q9Y2B0 182 aa21.97■■□□□ 1.11
CHRFAM7A-202ENST00000397827 CHGBP05060 677 aa21.96■■□□□ 1.11
CHRFAM7A-202ENST00000397827 ME3Q16798 604 aa21.96■■□□□ 1.11
CHRFAM7A-202ENST00000397827 RABL6Q3YEC7 729 aaPredicted RBP21.96■■□□□ 1.11
CHRFAM7A-202ENST00000397827 NECAB1Q8N987 351 aa21.96■■□□□ 1.11
CHRFAM7A-202ENST00000397827 CCDC9Q9Y3X0 531 aaKnown RBP21.96■■□□□ 1.11
CHRFAM7A-202ENST00000397827 GJB2P29033 226 aa21.96■■□□□ 1.11
CHRFAM7A-202ENST00000397827 CHMP3Q9Y3E7 222 aa21.96■■□□□ 1.11
CHRFAM7A-202ENST00000397827 ABCC6O95255 1503 aa21.96■■□□□ 1.11
CHRFAM7A-202ENST00000397827 ST3GAL1Q11201 340 aa21.95■■□□□ 1.1
CHRFAM7A-202ENST00000397827 LMBR1LQ6UX01 489 aa21.95■■□□□ 1.1
CHRFAM7A-202ENST00000397827 TTLL7Q6ZT98 887 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms