RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 OCLNQ16625 522 aa10.39□□□□□ -0.75
PDZD2-201ENST00000397559 SAMD5Q5TGI4 173 aa10.39□□□□□ -0.75
PDZD2-201ENST00000397559 SUSD3Q96L08 255 aa10.39□□□□□ -0.75
PDZD2-201ENST00000397559 SHROOM2Q13796 1616 aa10.38□□□□□ -0.75
PDZD2-201ENST00000397559 FAM157BP0CG42 384 aa10.38□□□□□ -0.75
PDZD2-201ENST00000397559 CTBSQ01459 385 aa10.38□□□□□ -0.75
PDZD2-201ENST00000397559 RTN1Q16799 776 aa10.38□□□□□ -0.75
PDZD2-201ENST00000397559 WHAMMQ8TF30 809 aa10.38□□□□□ -0.75
PDZD2-201ENST00000397559 CLP1Q92989 425 aaKnown RBP10.38□□□□□ -0.75
PDZD2-201ENST00000397559 ANKIB1Q9P2G1 1089 aa10.38□□□□□ -0.75
PDZD2-201ENST00000397559 GRIN2AQ12879 1464 aa10.37□□□□□ -0.75
PDZD2-201ENST00000397559 BMP4P12644 408 aa10.37□□□□□ -0.75
PDZD2-201ENST00000397559 CD33P20138 364 aa10.37□□□□□ -0.75
PDZD2-201ENST00000397559 NUP160Q12769 1436 aa10.37□□□□□ -0.75
PDZD2-201ENST00000397559 SVOPQ8N4V2 548 aa10.37□□□□□ -0.75
PDZD2-201ENST00000397559 RETREG2Q8NC44 543 aa10.37□□□□□ -0.75
PDZD2-201ENST00000397559 MKNK1Q9BUB5 465 aa10.37□□□□□ -0.75
PDZD2-201ENST00000397559 QTRT2Q9H974 415 aaKnown RBP10.37□□□□□ -0.75
PDZD2-201ENST00000397559 CXXC1Q9P0U4 656 aaPredicted RBP10.37□□□□□ -0.75
PDZD2-201ENST00000397559 SLAIN2Q9P270 581 aa10.37□□□□□ -0.75
PDZD2-201ENST00000397559 MAP2K3P46734 347 aa10.36□□□□□ -0.75
PDZD2-201ENST00000397559 ZNF385CQ66K41 422 aaPredicted RBP10.36□□□□□ -0.75
PDZD2-201ENST00000397559 CEP63Q96MT8 703 aa10.36□□□□□ -0.75
PDZD2-201ENST00000397559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.36□□□□□ -0.75
PDZD2-201ENST00000397559 KLK14Q9P0G3 267 aa10.36□□□□□ -0.75
PDZD2-201ENST00000397559 HCN2Q9UL51 889 aa10.36□□□□□ -0.75
PDZD2-201ENST00000397559 ADAMTS12P58397 1594 aa10.35□□□□□ -0.75
PDZD2-201ENST00000397559 CEP170Q5SW79 1584 aa10.35□□□□□ -0.75
PDZD2-201ENST00000397559 C2CD2LO14523 706 aa10.35□□□□□ -0.75
PDZD2-201ENST00000397559 HIF1AQ16665 826 aa10.35□□□□□ -0.75
PDZD2-201ENST00000397559 LYPD4Q6UWN0 246 aa10.35□□□□□ -0.75
PDZD2-201ENST00000397559 STRN4Q9NRL3 753 aa10.35□□□□□ -0.75
PDZD2-201ENST00000397559 STK17AQ9UEE5 414 aa10.35□□□□□ -0.75
PDZD2-201ENST00000397559 EFSO43281 561 aa10.34□□□□□ -0.75
PDZD2-201ENST00000397559 ATP2B4P23634 1241 aa10.34□□□□□ -0.75
PDZD2-201ENST00000397559 DGKZQ13574 1117 aa10.34□□□□□ -0.75
PDZD2-201ENST00000397559 TRAIPQ9BWF2 469 aa10.34□□□□□ -0.75
PDZD2-201ENST00000397559 MARK1Q9P0L2 795 aa10.34□□□□□ -0.75
PDZD2-201ENST00000397559 KIF13AQ9H1H9 1805 aa10.34□□□□□ -0.75
PDZD2-201ENST00000397559 ZBTB7CA1YPR0 619 aa10.33□□□□□ -0.76
PDZD2-201ENST00000397559 CARNS1A5YM72 827 aa10.33□□□□□ -0.76
PDZD2-201ENST00000397559 TMEM88BA6NKF7 163 aa10.33□□□□□ -0.76
PDZD2-201ENST00000397559 CAPN12Q6ZSI9 719 aa10.33□□□□□ -0.76
PDZD2-201ENST00000397559 ACDQ96AP0 544 aa10.33□□□□□ -0.76
PDZD2-201ENST00000397559 BRD7Q9NPI1 651 aa10.33□□□□□ -0.76
PDZD2-201ENST00000397559 ERCC6L2Q5T890 1561 aa10.32□□□□□ -0.76
PDZD2-201ENST00000397559 FAM181BA6NEQ2 426 aa10.32□□□□□ -0.76
PDZD2-201ENST00000397559 CELA2BP08218 269 aaPredicted RBP10.32□□□□□ -0.76
PDZD2-201ENST00000397559 TYRO3Q06418 890 aa10.32□□□□□ -0.76
PDZD2-201ENST00000397559 SFSWAPQ12872 951 aaKnown RBP10.32□□□□□ -0.76
PDZD2-201ENST00000397559 BTLAQ7Z6A9 289 aa10.32□□□□□ -0.76
PDZD2-201ENST00000397559 OXCT2Q9BYC2 517 aaPredicted RBP10.32□□□□□ -0.76
PDZD2-201ENST00000397559 BCS1LQ9Y276 419 aa10.32□□□□□ -0.76
PDZD2-201ENST00000397559 MAP3K10Q02779 954 aa10.31□□□□□ -0.76
PDZD2-201ENST00000397559 LAMC2Q13753 1193 aa10.31□□□□□ -0.76
PDZD2-201ENST00000397559 GRIN2CQ14957 1233 aa10.31□□□□□ -0.76
PDZD2-201ENST00000397559 MYO19Q96H55 970 aa10.31□□□□□ -0.76
PDZD2-201ENST00000397559 LRFN2Q9ULH4 789 aa10.31□□□□□ -0.76
PDZD2-201ENST00000397559 ERICH3Q5RHP9 1530 aa10.3□□□□□ -0.76
PDZD2-201ENST00000397559 TGFBR3LH3BV60 316 aa10.3□□□□□ -0.76
PDZD2-201ENST00000397559 TRIM26Q12899 539 aaPredicted RBP10.3□□□□□ -0.76
PDZD2-201ENST00000397559 NAA30Q147X3 362 aaPredicted RBP10.3□□□□□ -0.76
PDZD2-201ENST00000397559 C11orf91Q3C1V1 193 aa10.3□□□□□ -0.76
PDZD2-201ENST00000397559 FAM182BQ5T319 152 aa10.3□□□□□ -0.76
PDZD2-201ENST00000397559 PODXL2Q9NZ53 605 aa10.3□□□□□ -0.76
PDZD2-201ENST00000397559 PRR12Q9ULL5 1215 aa10.3□□□□□ -0.76
PDZD2-201ENST00000397559 FHAD1B1AJZ9 1412 aa10.3□□□□□ -0.76
PDZD2-201ENST00000397559 MAPKBP1O60336 1514 aa10.29□□□□□ -0.76
PDZD2-201ENST00000397559 BCRP11274 1271 aa10.29□□□□□ -0.76
PDZD2-201ENST00000397559 COX20Q5RI15 118 aa10.29□□□□□ -0.76
PDZD2-201ENST00000397559 KCTD17Q8N5Z5 321 aa10.29□□□□□ -0.76
PDZD2-201ENST00000397559 SAP130Q9H0E3 1048 aa10.29□□□□□ -0.76
PDZD2-201ENST00000397559 WRNQ14191 1432 aaPredicted RBP eCLIP10.29□□□□□ -0.76
PDZD2-201ENST00000397559 PTCD1O75127 700 aaKnown RBP10.28□□□□□ -0.76
PDZD2-201ENST00000397559 IER5Q5VY09 327 aa10.28□□□□□ -0.76
PDZD2-201ENST00000397559 C16orf46Q6P387 395 aa10.28□□□□□ -0.76
PDZD2-201ENST00000397559 COL26A1Q96A83 441 aa10.28□□□□□ -0.76
PDZD2-201ENST00000397559 GGA1Q9UJY5 639 aa10.28□□□□□ -0.76
PDZD2-201ENST00000397559 GDF2Q9UK05 429 aaPredicted RBP10.28□□□□□ -0.76
PDZD2-201ENST00000397559 KCNH4Q9UQ05 1017 aa10.28□□□□□ -0.76
PDZD2-201ENST00000397559 USTQ9Y2C2 406 aa10.28□□□□□ -0.76
PDZD2-201ENST00000397559 SCNN1AP37088 669 aa10.27□□□□□ -0.77
PDZD2-201ENST00000397559 GOLGA6L1Q8N7Z2 621 aa10.27□□□□□ -0.77
PDZD2-201ENST00000397559 IFT43Q96FT9 208 aa10.27□□□□□ -0.77
PDZD2-201ENST00000397559 ABCC10Q5T3U5 1492 aa10.27□□□□□ -0.77
PDZD2-201ENST00000397559 BIVM-ERCC5R4GMW8 1640 aa10.26□□□□□ -0.77
PDZD2-201ENST00000397559 NEURL1BA8MQ27 555 aa10.26□□□□□ -0.77
PDZD2-201ENST00000397559 ARHGEF15O94989 841 aa10.26□□□□□ -0.77
PDZD2-201ENST00000397559 ARAFP10398 606 aa10.26□□□□□ -0.77
PDZD2-201ENST00000397559 IDH3AP50213 366 aa10.26□□□□□ -0.77
PDZD2-201ENST00000397559 PCBP4P57723 403 aaKnown RBP10.26□□□□□ -0.77
PDZD2-201ENST00000397559 SLC30A3Q99726 388 aa10.26□□□□□ -0.77
PDZD2-201ENST00000397559 SEPT3Q9UH03 358 aa10.26□□□□□ -0.77
PDZD2-201ENST00000397559 DMGDHQ9UI17 866 aaKnown RBP10.26□□□□□ -0.77
PDZD2-201ENST00000397559 DNMT3AQ9Y6K1 912 aaPredicted RBP10.26□□□□□ -0.77
PDZD2-201ENST00000397559 OIP5O43482 229 aa10.25□□□□□ -0.77
PDZD2-201ENST00000397559 MICAL2O94851 1124 aa10.25□□□□□ -0.77
PDZD2-201ENST00000397559 SPEM2Q0P670 501 aa10.25□□□□□ -0.77
PDZD2-201ENST00000397559 C1orf229Q6ZS94 237 aaPredicted RBP10.25□□□□□ -0.77
PDZD2-201ENST00000397559 RAB44Q7Z6P3 723 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms