RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ARHGEF10LQ9HCE6 1279 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 KCNG1Q9UIX4 513 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 SCINQ9Y6U3 715 aa8.64□□□□□ -1.03
SMCO1-201ENST00000397537 MAPKBP1O60336 1514 aa8.63□□□□□ -1.03
SMCO1-201ENST00000397537 NRDCO43847 1150 aa8.63□□□□□ -1.03
SMCO1-201ENST00000397537 PPARGC1BQ86YN6 1023 aaKnown RBP8.63□□□□□ -1.03
SMCO1-201ENST00000397537 LILRB2Q8N423 598 aa8.63□□□□□ -1.03
SMCO1-201ENST00000397537 CEP63Q96MT8 703 aa8.63□□□□□ -1.03
SMCO1-201ENST00000397537 FAM126AQ9BYI3 521 aaPredicted RBP8.63□□□□□ -1.03
SMCO1-201ENST00000397537 GGT7Q9UJ14 662 aa8.63□□□□□ -1.03
SMCO1-201ENST00000397537 KLF4O43474 513 aa8.62□□□□□ -1.03
SMCO1-201ENST00000397537 BPNT1O95861 308 aa8.62□□□□□ -1.03
SMCO1-201ENST00000397537 FOSP01100 380 aaPredicted RBP8.62□□□□□ -1.03
SMCO1-201ENST00000397537 KRT18P05783 430 aaKnown RBP8.62□□□□□ -1.03
SMCO1-201ENST00000397537 NEFMP07197 916 aa8.62□□□□□ -1.03
SMCO1-201ENST00000397537 LRRC41Q15345 812 aa8.62□□□□□ -1.03
SMCO1-201ENST00000397537 ZRSR2Q15696 482 aaKnown RBP8.62□□□□□ -1.03
SMCO1-201ENST00000397537 ALKBH8Q96BT7 664 aaKnown RBP8.62□□□□□ -1.03
SMCO1-201ENST00000397537 JPH4Q96JJ6 628 aa8.62□□□□□ -1.03
SMCO1-201ENST00000397537 HINFPQ9BQA5 517 aa8.62□□□□□ -1.03
SMCO1-201ENST00000397537 CFHR5Q9BXR6 569 aa8.62□□□□□ -1.03
SMCO1-201ENST00000397537 CEP170Q5SW79 1584 aa8.62□□□□□ -1.03
SMCO1-201ENST00000397537 WDR97A6NE52 1622 aa8.62□□□□□ -1.03
SMCO1-201ENST00000397537 PNMA6FA0A0J9YX94 578 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 FZD6O60353 706 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 ETFBP38117 255 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 ANKS3Q6ZW76 656 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 ENAMQ9NRM1 1142 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 KLF15Q9UIH9 416 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 AK5Q9Y6K8 562 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 GRIN2BQ13224 1484 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 GTF2IP78347 998 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 RAB33AQ14088 237 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 EFCAB2Q5VUJ9 269 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 SDR16C5Q8N3Y7 309 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 FKBPLQ9UIM3 349 aa8.61□□□□□ -1.03
SMCO1-201ENST00000397537 SOGA1O94964 1423 aa8.6□□□□□ -1.03
SMCO1-201ENST00000397537 SSBP05455 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMCO1-201ENST00000397537 BRD3Q15059 726 aa8.6□□□□□ -1.03
SMCO1-201ENST00000397537 C10orf62Q5T681 223 aaPredicted RBP8.6□□□□□ -1.03
SMCO1-201ENST00000397537 ALG1LQ6GMV1 187 aa8.6□□□□□ -1.03
SMCO1-201ENST00000397537 RASGRP4Q8TDF6 673 aa8.6□□□□□ -1.03
SMCO1-201ENST00000397537 COL26A1Q96A83 441 aa8.6□□□□□ -1.03
SMCO1-201ENST00000397537 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.6□□□□□ -1.03
SMCO1-201ENST00000397537 SCUBE2Q9NQ36 999 aa8.6□□□□□ -1.03
SMCO1-201ENST00000397537 POU3F3P20264 500 aaPredicted RBP8.59□□□□□ -1.03
SMCO1-201ENST00000397537 TKFCQ3LXA3 575 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 NUDT18Q6ZVK8 323 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 HOMER1Q86YM7 354 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 TRIM55Q9BYV6 548 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 CLSPNQ9HAW4 1339 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 CCDC85CA6NKD9 419 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 ALDH1L1O75891 902 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 MAN1A1P33908 653 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 CCDC184Q52MB2 194 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 PPP4R4Q6NUP7 873 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 PPM1EQ8WY54 764 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 ATP8A1Q9Y2Q0 1164 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 RBM19Q9Y4C8 960 aaKnown RBP8.59□□□□□ -1.03
SMCO1-201ENST00000397537 MRVI1Q9Y6F6 885 aa8.59□□□□□ -1.03
SMCO1-201ENST00000397537 V9GY48 417 aaPredicted RBP8.59□□□□□ -1.03
SMCO1-201ENST00000397537 TOP2BQ02880 1626 aa8.58□□□□□ -1.04
SMCO1-201ENST00000397537 MYL1P05976 194 aa8.58□□□□□ -1.04
SMCO1-201ENST00000397537 PTMAP06454 111 aaKnown RBP8.58□□□□□ -1.04
SMCO1-201ENST00000397537 COPB2P35606 906 aa8.58□□□□□ -1.04
SMCO1-201ENST00000397537 NFX1Q12986 1120 aaKnown RBP8.58□□□□□ -1.04
SMCO1-201ENST00000397537 MMRN1Q13201 1228 aa8.58□□□□□ -1.04
SMCO1-201ENST00000397537 MAPRE1Q15691 268 aaKnown RBP8.58□□□□□ -1.04
SMCO1-201ENST00000397537 C1orf131Q8NDD1 294 aaKnown RBP8.58□□□□□ -1.04
SMCO1-201ENST00000397537 PCGF6Q9BYE7 350 aa8.58□□□□□ -1.04
SMCO1-201ENST00000397537 NIF3L1Q9GZT8 377 aa8.58□□□□□ -1.04
SMCO1-201ENST00000397537 HSP90AA1P07900 732 aaKnown RBP8.57□□□□□ -1.04
SMCO1-201ENST00000397537 FAM163BP0C2L3 166 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 CDC27P30260 824 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 PPP2R5AQ15172 486 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 TTF1Q15361 905 aaPredicted RBP8.57□□□□□ -1.04
SMCO1-201ENST00000397537 TSEN2Q8NCE0 465 aaKnown RBP8.57□□□□□ -1.04
SMCO1-201ENST00000397537 SVIPQ8NHG7 77 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 HNRNPLLQ8WVV9 542 aaKnown RBP8.57□□□□□ -1.04
SMCO1-201ENST00000397537 DNAJC7Q99615 494 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 FEZ1Q99689 392 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 TMEM260Q9NX78 707 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 INTUQ9ULD6 942 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 COL6A1P12109 1028 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 EIF1AXP47813 144 aaKnown RBP8.57□□□□□ -1.04
SMCO1-201ENST00000397537 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 SQSTM1Q13501 440 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 KRT26Q7Z3Y9 468 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 LRP10Q7Z4F1 713 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 CXorf38Q8TB03 319 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 TRPM4Q8TD43 1214 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 SEC16BQ96JE7 1060 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 NEUROD6Q96NK8 337 aa8.57□□□□□ -1.04
SMCO1-201ENST00000397537 TPX2Q9ULW0 747 aaKnown RBP8.57□□□□□ -1.04
SMCO1-201ENST00000397537 EPHB1P54762 984 aa8.56□□□□□ -1.04
SMCO1-201ENST00000397537 ICE2Q659A1 982 aa8.56□□□□□ -1.04
SMCO1-201ENST00000397537 C3orf67Q6ZVT6 689 aa8.56□□□□□ -1.04
SMCO1-201ENST00000397537 C14orf80Q86SX3 495 aa8.56□□□□□ -1.04
SMCO1-201ENST00000397537 SECISBP2LQ93073 1101 aaKnown RBP8.56□□□□□ -1.04
SMCO1-201ENST00000397537 ANAPC4Q9UJX5 808 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms