RNA–Protein interactions for RNA: ENST00000397417.6

IFT140-202, Transcript of intraflagellar transport 140, humanhuman

TSL 5

Gene IFT140, Length 4,023 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-202ENST00000397417 CKAP2LQ8IYA6 745 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 MPHOSPH10O00566 681 aaKnown RBP13.19□□□□□ -0.3
IFT140-202ENST00000397417 TPM4P67936 248 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 DHX8Q14562 1220 aaKnown RBP13.19□□□□□ -0.3
IFT140-202ENST00000397417 SLC9C2Q5TAH2 1124 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 FAM227BQ96M60 508 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 ESYT1Q9BSJ8 1104 aa13.19□□□□□ -0.3
IFT140-202ENST00000397417 ZNF213O14771 459 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 VAT1LQ9HCJ6 419 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 AKAP2Q9Y2D5 859 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 GIGYF1O75420 1035 aaPredicted RBP13.18□□□□□ -0.3
IFT140-202ENST00000397417 MCM2P49736 904 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 RPGRQ92834 1020 aaKnown RBP13.18□□□□□ -0.3
IFT140-202ENST00000397417 EVI5LQ96CN4 794 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 TRIM5Q9C035 493 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 ARAP3Q8WWN8 1544 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 KINO60870 393 aaKnown RBP13.18□□□□□ -0.3
IFT140-202ENST00000397417 ECM2O94769 699 aaPredicted RBP13.18□□□□□ -0.3
IFT140-202ENST00000397417 SPATA32Q96LK8 384 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 EFCAB6Q5THR3 1501 aa13.18□□□□□ -0.3
IFT140-202ENST00000397417 FAM173BQ6P4H8 233 aa13.17□□□□□ -0.3
IFT140-202ENST00000397417 WDR33Q9C0J8 1336 aaKnown RBP13.17□□□□□ -0.3
IFT140-202ENST00000397417 ZFYVE9O95405 1425 aa13.17□□□□□ -0.3
IFT140-202ENST00000397417 PDCP20941 246 aa13.17□□□□□ -0.3
IFT140-202ENST00000397417 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
IFT140-202ENST00000397417 KRT85P78386 507 aa13.17□□□□□ -0.3
IFT140-202ENST00000397417 SETDB2Q96T68 719 aa13.17□□□□□ -0.3
IFT140-202ENST00000397417 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
IFT140-202ENST00000397417 SPHKAPQ2M3C7 1700 aa13.17□□□□□ -0.3
IFT140-202ENST00000397417 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
IFT140-202ENST00000397417 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
IFT140-202ENST00000397417 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 SLC5A1P13866 664 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 ZKSCAN3Q9BRR0 538 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 ZHX3Q9H4I2 956 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 MKNK2Q9HBH9 465 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 ABCC3O15438 1527 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
IFT140-202ENST00000397417 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
IFT140-202ENST00000397417 GJB2P29033 226 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 PDILTQ8N807 584 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 PHKG2P15735 406 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
IFT140-202ENST00000397417 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.3
IFT140-202ENST00000397417 MYOM2P54296 1465 aa13.15□□□□□ -0.3
IFT140-202ENST00000397417 TET3O43151 1660 aa13.15□□□□□ -0.3
IFT140-202ENST00000397417 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
IFT140-202ENST00000397417 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
IFT140-202ENST00000397417 STX8Q9UNK0 236 aa13.15□□□□□ -0.3
IFT140-202ENST00000397417 ABCA9Q8IUA7 1624 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 BIN1O00499 593 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 SEC62Q99442 399 aaKnown RBP13.14□□□□□ -0.31
IFT140-202ENST00000397417 TCEAL9Q9UHQ7 104 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 A0A1B0GUL7 405 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 SNAP23O00161 211 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 CHMLP26374 656 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 TNMDQ9H2S6 317 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 PCDH11XQ9BZA7 1347 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 PCDH11YQ9BZA8 1340 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 NEK1Q96PY6 1258 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 CTNNA3Q9UI47 895 aa13.14□□□□□ -0.31
IFT140-202ENST00000397417 PRDM1O75626 825 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 FILIP1Q7Z7B0 1213 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 UNC5CLQ8IV45 518 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 RNF17Q9BXT8 1623 aaKnown RBP13.13□□□□□ -0.31
IFT140-202ENST00000397417 IQGAP1P46940 1657 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 SMC2O95347 1197 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 CYP7A1P22680 504 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 GCKRQ14397 625 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 HSP90AA4PQ58FG1 418 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 ZSCAN25Q6NSZ9 544 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 GSPT1P15170 499 aaKnown RBP13.13□□□□□ -0.31
IFT140-202ENST00000397417 ITGA6P23229 1130 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 MRE11P49959 708 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 TEX13AQ9BXU3 409 aaPredicted RBP13.13□□□□□ -0.31
IFT140-202ENST00000397417 GRPEL1Q9HAV7 217 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 CWC22Q9HCG8 908 aaKnown RBP13.13□□□□□ -0.31
IFT140-202ENST00000397417 HECW2Q9P2P5 1572 aa13.13□□□□□ -0.31
IFT140-202ENST00000397417 KIF1BO60333 1816 aa13.12□□□□□ -0.31
IFT140-202ENST00000397417 PICALMQ13492 652 aa13.12□□□□□ -0.31
IFT140-202ENST00000397417 ANKRD1Q15327 319 aa13.12□□□□□ -0.31
IFT140-202ENST00000397417 MSL1Q68DK7 614 aa13.12□□□□□ -0.31
IFT140-202ENST00000397417 PAG1Q9NWQ8 432 aa13.12□□□□□ -0.31
IFT140-202ENST00000397417 SYNE4Q8N205 404 aa13.12□□□□□ -0.31
IFT140-202ENST00000397417 CDC5LQ99459 802 aaKnown RBP13.12□□□□□ -0.31
IFT140-202ENST00000397417 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
IFT140-202ENST00000397417 CCNL1Q9UK58 526 aaPredicted RBP13.12□□□□□ -0.31
IFT140-202ENST00000397417 USP6P35125 1406 aa13.12□□□□□ -0.31
IFT140-202ENST00000397417 BAG4O95429 457 aaKnown RBP13.11□□□□□ -0.31
IFT140-202ENST00000397417 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
IFT140-202ENST00000397417 EAF2Q96CJ1 260 aaPredicted RBP13.11□□□□□ -0.31
IFT140-202ENST00000397417 XBP1P17861 261 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms