RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PI4KAP1Q8N8J0 262 aa32.42■■■□□ 2.78
TSPAN4-207ENST00000397411 ARFGEF2Q9Y6D5 1785 aa32.41■■■□□ 2.78
TSPAN4-207ENST00000397411 TTLL6Q8N841 843 aa32.41■■■□□ 2.78
TSPAN4-207ENST00000397411 ZNF428Q96B54 188 aa32.41■■■□□ 2.78
TSPAN4-207ENST00000397411 ISCA1Q9BUE6 129 aa32.41■■■□□ 2.78
TSPAN4-207ENST00000397411 METTL22Q9BUU2 404 aaPredicted RBP32.41■■■□□ 2.78
TSPAN4-207ENST00000397411 IBTKQ9P2D0 1353 aaPredicted RBP32.41■■■□□ 2.78
TSPAN4-207ENST00000397411 NEXNQ0ZGT2 675 aa32.4■■■□□ 2.78
TSPAN4-207ENST00000397411 MASTLQ96GX5 879 aa32.39■■■□□ 2.78
TSPAN4-207ENST00000397411 RNF123Q5XPI4 1314 aa32.37■■■□□ 2.77
TSPAN4-207ENST00000397411 SRGNP10124 158 aa32.37■■■□□ 2.77
TSPAN4-207ENST00000397411 TRIM28Q13263 835 aaKnown RBP32.37■■■□□ 2.77
TSPAN4-207ENST00000397411 CNKSR1Q969H4 720 aa32.37■■■□□ 2.77
TSPAN4-207ENST00000397411 SH3TC1Q8TE82 1336 aa32.36■■■□□ 2.77
TSPAN4-207ENST00000397411 STYK1Q6J9G0 422 aa32.36■■■□□ 2.77
TSPAN4-207ENST00000397411 ARHGAP27Q6ZUM4 889 aa32.36■■■□□ 2.77
TSPAN4-207ENST00000397411 NLRP3Q96P20 1036 aa32.36■■■□□ 2.77
TSPAN4-207ENST00000397411 BRCA1P38398 1863 aaKnown RBP32.35■■■□□ 2.77
TSPAN4-207ENST00000397411 NPR1P16066 1061 aa32.35■■■□□ 2.77
TSPAN4-207ENST00000397411 ABCC12Q96J65 1359 aa32.34■■■□□ 2.77
TSPAN4-207ENST00000397411 CCDC191Q8NCU4 936 aa32.34■■■□□ 2.77
TSPAN4-207ENST00000397411 RPGRQ92834 1020 aaKnown RBP32.34■■■□□ 2.77
TSPAN4-207ENST00000397411 CWC25Q9NXE8 425 aaPredicted RBP32.34■■■□□ 2.77
TSPAN4-207ENST00000397411 CT47B1P0C2W7 299 aaPredicted RBP32.33■■■□□ 2.77
TSPAN4-207ENST00000397411 SLC10A5Q5PT55 438 aa32.33■■■□□ 2.77
TSPAN4-207ENST00000397411 ADCY9O60503 1353 aa32.32■■■□□ 2.77
TSPAN4-207ENST00000397411 DLEC1Q9Y238 1755 aa32.32■■■□□ 2.77
TSPAN4-207ENST00000397411 KLRG2A4D1S0 409 aaPredicted RBP32.32■■■□□ 2.76
TSPAN4-207ENST00000397411 HCLS1P14317 486 aaPredicted RBP32.32■■■□□ 2.76
TSPAN4-207ENST00000397411 RTL5Q5HYW3 569 aaPredicted RBP32.32■■■□□ 2.76
TSPAN4-207ENST00000397411 DNAAF4Q8WXU2 420 aa32.32■■■□□ 2.76
TSPAN4-207ENST00000397411 FAM89AQ96GI7 184 aa32.32■■■□□ 2.76
TSPAN4-207ENST00000397411 ZNF219Q9P2Y4 722 aaPredicted RBP32.32■■■□□ 2.76
TSPAN4-207ENST00000397411 SYNE4Q8N205 404 aa32.31■■■□□ 2.76
TSPAN4-207ENST00000397411 SSH1Q8WYL5 1049 aa32.31■■■□□ 2.76
TSPAN4-207ENST00000397411 ZBED9Q6R2W3 1325 aa32.3■■■□□ 2.76
TSPAN4-207ENST00000397411 ALDH1B1P30837 517 aa32.3■■■□□ 2.76
TSPAN4-207ENST00000397411 MRPL50Q8N5N7 158 aaKnown RBP32.3■■■□□ 2.76
TSPAN4-207ENST00000397411 CHD4Q14839 1912 aa32.3■■■□□ 2.76
TSPAN4-207ENST00000397411 ALDH1L2Q3SY69 923 aa32.29■■■□□ 2.76
TSPAN4-207ENST00000397411 RBM17Q96I25 401 aaKnown RBP32.29■■■□□ 2.76
TSPAN4-207ENST00000397411 BCL2L13Q9BXK5 485 aa32.29■■■□□ 2.76
TSPAN4-207ENST00000397411 SMC4Q9NTJ3 1288 aa32.29■■■□□ 2.76
TSPAN4-207ENST00000397411 COL11A2P13942 1736 aaPredicted RBP32.29■■■□□ 2.76
TSPAN4-207ENST00000397411 ARFGEF1Q9Y6D6 1849 aa32.28■■■□□ 2.76
TSPAN4-207ENST00000397411 HSP90B1P14625 803 aaKnown RBP32.28■■■□□ 2.76
TSPAN4-207ENST00000397411 ZBTB38Q8NAP3 1195 aaPredicted RBP32.28■■■□□ 2.76
TSPAN4-207ENST00000397411 F6X3S4 739 aa32.27■■■□□ 2.76
TSPAN4-207ENST00000397411 YY1P25490 414 aa32.27■■■□□ 2.76
TSPAN4-207ENST00000397411 RIC1Q4ADV7 1423 aa32.26■■■□□ 2.76
TSPAN4-207ENST00000397411 IGKV5-2P06315 115 aa32.26■■■□□ 2.75
TSPAN4-207ENST00000397411 CWF19L2Q2TBE0 894 aaKnown RBP32.26■■■□□ 2.75
TSPAN4-207ENST00000397411 PRPF40BQ6NWY9 871 aaKnown RBP32.26■■■□□ 2.75
TSPAN4-207ENST00000397411 CACNA1SQ13698 1873 aa32.25■■■□□ 2.75
TSPAN4-207ENST00000397411 IRS4O14654 1257 aaPredicted RBP32.25■■■□□ 2.75
TSPAN4-207ENST00000397411 C21orf2O43822 256 aa32.25■■■□□ 2.75
TSPAN4-207ENST00000397411 CRY2Q49AN0 593 aa32.25■■■□□ 2.75
TSPAN4-207ENST00000397411 JARID2Q92833 1246 aaPredicted RBP32.25■■■□□ 2.75
TSPAN4-207ENST00000397411 TNRC6CQ9HCJ0 1690 aaKnown RBP32.24■■■□□ 2.75
TSPAN4-207ENST00000397411 PCCAP05165 728 aaPredicted RBP32.24■■■□□ 2.75
TSPAN4-207ENST00000397411 SLC4A10Q6U841 1118 aa32.24■■■□□ 2.75
TSPAN4-207ENST00000397411 C3orf67Q6ZVT6 689 aa32.24■■■□□ 2.75
TSPAN4-207ENST00000397411 LINS1Q8NG48 757 aa32.24■■■□□ 2.75
TSPAN4-207ENST00000397411 NEURL1BA8MQ27 555 aa32.23■■■□□ 2.75
TSPAN4-207ENST00000397411 HOXA10P31260 410 aaPredicted RBP32.22■■■□□ 2.75
TSPAN4-207ENST00000397411 SLX4Q8IY92 1834 aa32.21■■■□□ 2.75
TSPAN4-207ENST00000397411 SOGA3Q5TF21 947 aa32.21■■■□□ 2.75
TSPAN4-207ENST00000397411 DDX46Q7L014 1031 aaKnown RBP32.21■■■□□ 2.75
TSPAN4-207ENST00000397411 CRAMP1Q96RY5 1269 aa32.21■■■□□ 2.75
TSPAN4-207ENST00000397411 PTPRCP08575 1304 aa32.21■■■□□ 2.75
TSPAN4-207ENST00000397411 TMX4Q9H1E5 349 aaPredicted RBP32.19■■■□□ 2.74
TSPAN4-207ENST00000397411 GCKRQ14397 625 aa32.18■■■□□ 2.74
TSPAN4-207ENST00000397411 RARSP54136 660 aaKnown RBP32.17■■■□□ 2.74
TSPAN4-207ENST00000397411 BEND3Q5T5X7 828 aa32.17■■■□□ 2.74
TSPAN4-207ENST00000397411 PDE8AO60658 829 aa32.16■■■□□ 2.74
TSPAN4-207ENST00000397411 UBE3BQ7Z3V4 1068 aa32.16■■■□□ 2.74
TSPAN4-207ENST00000397411 SRCIN1Q9C0H9 1055 aa32.16■■■□□ 2.74
TSPAN4-207ENST00000397411 LAMB2P55268 1798 aa32.15■■■□□ 2.74
TSPAN4-207ENST00000397411 DDX60Q8IY21 1712 aaKnown RBP32.14■■■□□ 2.74
TSPAN4-207ENST00000397411 H7C1W4 665 aa32.14■■■□□ 2.74
TSPAN4-207ENST00000397411 SF3B3Q15393 1217 aaKnown RBP32.14■■■□□ 2.74
TSPAN4-207ENST00000397411 CCDC93Q567U6 631 aa32.14■■■□□ 2.74
TSPAN4-207ENST00000397411 NOB1Q9ULX3 412 aaKnown RBP32.14■■■□□ 2.74
TSPAN4-207ENST00000397411 CDHR2Q9BYE9 1310 aa32.14■■■□□ 2.74
TSPAN4-207ENST00000397411 PPEF1O14829 653 aaPredicted RBP32.13■■■□□ 2.73
TSPAN4-207ENST00000397411 C9orf78Q9NZ63 289 aaPredicted RBP32.13■■■□□ 2.73
TSPAN4-207ENST00000397411 ABCC4O15439 1325 aa32.12■■■□□ 2.73
TSPAN4-207ENST00000397411 ALDH1L1O75891 902 aa32.12■■■□□ 2.73
TSPAN4-207ENST00000397411 BBOX1O75936 387 aa32.12■■■□□ 2.73
TSPAN4-207ENST00000397411 CCDC152Q4G0S7 254 aa32.12■■■□□ 2.73
TSPAN4-207ENST00000397411 C7orf43Q8WVR3 580 aa32.12■■■□□ 2.73
TSPAN4-207ENST00000397411 RASSF7Q02833 373 aa32.11■■■□□ 2.73
TSPAN4-207ENST00000397411 GRAPQ13588 217 aa32.1■■■□□ 2.73
TSPAN4-207ENST00000397411 C9orf131Q5VYM1 1079 aa32.1■■■□□ 2.73
TSPAN4-207ENST00000397411 CC2D2BQ6DHV5 1058 aa32.1■■■□□ 2.73
TSPAN4-207ENST00000397411 RTKN2Q8IZC4 609 aa32.1■■■□□ 2.73
TSPAN4-207ENST00000397411 GRAPLQ8TC17 118 aaPredicted RBP32.1■■■□□ 2.73
TSPAN4-207ENST00000397411 API5Q9BZZ5 524 aaKnown RBP32.1■■■□□ 2.73
TSPAN4-207ENST00000397411 BRPF1P55201 1214 aaPredicted RBP32.09■■■□□ 2.73
TSPAN4-207ENST00000397411 CCDC85AQ96PX6 553 aaPredicted RBP32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms