RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 IL17RAQ96F46 866 aa28.63■■■□□ 2.17
PABPN1-202ENST00000397276 INTS4Q96HW7 963 aaKnown RBP28.63■■■□□ 2.17
PABPN1-202ENST00000397276 GPT2Q8TD30 523 aa28.63■■■□□ 2.17
PABPN1-202ENST00000397276 COL18A1P39060 1754 aa28.63■■■□□ 2.17
PABPN1-202ENST00000397276 BRD1O95696 1058 aa28.62■■■□□ 2.17
PABPN1-202ENST00000397276 PKNOX2Q96KN3 472 aa28.62■■■□□ 2.17
PABPN1-202ENST00000397276 A0A087WZG4 1122 aa28.62■■■□□ 2.17
PABPN1-202ENST00000397276 ADCK5Q3MIX3 580 aa28.62■■■□□ 2.17
PABPN1-202ENST00000397276 NSFL1CQ9UNZ2 370 aaKnown RBP28.61■■■□□ 2.17
PABPN1-202ENST00000397276 EDC3Q96F86 508 aaKnown RBP28.6■■■□□ 2.17
PABPN1-202ENST00000397276 NMIQ13287 307 aaPredicted RBP28.6■■■□□ 2.17
PABPN1-202ENST00000397276 KCNJ4P48050 445 aa28.59■■■□□ 2.17
PABPN1-202ENST00000397276 ZSCAN23Q3MJ62 389 aa28.59■■■□□ 2.17
PABPN1-202ENST00000397276 JAKMIP1Q96N16 626 aaKnown RBP28.59■■■□□ 2.17
PABPN1-202ENST00000397276 TTC14Q96N46 770 aa28.59■■■□□ 2.17
PABPN1-202ENST00000397276 LMTK3Q96Q04 1460 aa28.59■■■□□ 2.17
PABPN1-202ENST00000397276 CCDC173Q0VFZ6 552 aa28.59■■■□□ 2.17
PABPN1-202ENST00000397276 RUFY3Q7L099 469 aa28.59■■■□□ 2.17
PABPN1-202ENST00000397276 ZCRB1Q8TBF4 217 aaKnown RBP28.59■■■□□ 2.17
PABPN1-202ENST00000397276 PPP1R9BQ96SB3 815 aa28.59■■■□□ 2.17
PABPN1-202ENST00000397276 FSD1Q9BTV5 496 aa28.59■■■□□ 2.17
PABPN1-202ENST00000397276 CCDC9Q9Y3X0 531 aaKnown RBP28.59■■■□□ 2.17
PABPN1-202ENST00000397276 NDUFB9Q9Y6M9 179 aa28.59■■■□□ 2.17
PABPN1-202ENST00000397276 STRN4Q9NRL3 753 aa28.58■■■□□ 2.17
PABPN1-202ENST00000397276 CHMP3Q9Y3E7 222 aa28.58■■■□□ 2.17
PABPN1-202ENST00000397276 GDPD2Q9HCC8 539 aa28.57■■■□□ 2.16
PABPN1-202ENST00000397276 TFCP2Q12800 502 aa28.56■■■□□ 2.16
PABPN1-202ENST00000397276 NBPF26B4DH59 902 aa28.56■■■□□ 2.16
PABPN1-202ENST00000397276 PTPN12Q05209 780 aaKnown RBP28.56■■■□□ 2.16
PABPN1-202ENST00000397276 NBPF14Q5TI25 921 aa28.56■■■□□ 2.16
PABPN1-202ENST00000397276 NBPF10Q6P3W6 841 aaKnown RBP28.56■■■□□ 2.16
PABPN1-202ENST00000397276 NBPF15Q8N660 670 aa28.56■■■□□ 2.16
PABPN1-202ENST00000397276 CPDO75976 1380 aa28.55■■■□□ 2.16
PABPN1-202ENST00000397276 A0A0D9SFI3 127 aa28.55■■■□□ 2.16
PABPN1-202ENST00000397276 A1BGP04217 495 aa28.55■■■□□ 2.16
PABPN1-202ENST00000397276 TTLL7Q6ZT98 887 aa28.55■■■□□ 2.16
PABPN1-202ENST00000397276 LIMCH1Q9UPQ0 1083 aa28.55■■■□□ 2.16
PABPN1-202ENST00000397276 LARGE1O95461 756 aa28.55■■■□□ 2.16
PABPN1-202ENST00000397276 TPRNQ4KMQ1 711 aa28.55■■■□□ 2.16
PABPN1-202ENST00000397276 ZSCAN30Q86W11 494 aa28.55■■■□□ 2.16
PABPN1-202ENST00000397276 RBM8AQ9Y5S9 174 aaKnown RBP28.55■■■□□ 2.16
PABPN1-202ENST00000397276 CCDC171Q6TFL3 1326 aa28.54■■■□□ 2.16
PABPN1-202ENST00000397276 WDR17Q8IZU2 1322 aa28.54■■■□□ 2.16
PABPN1-202ENST00000397276 RFX5P48382 616 aaPredicted RBP28.53■■■□□ 2.16
PABPN1-202ENST00000397276 PLBD2Q8NHP8 589 aa28.53■■■□□ 2.16
PABPN1-202ENST00000397276 LMBR1LQ6UX01 489 aa28.53■■■□□ 2.16
PABPN1-202ENST00000397276 COPRSQ9NQ92 184 aa28.53■■■□□ 2.16
PABPN1-202ENST00000397276 PDRG1Q9NUG6 133 aa28.53■■■□□ 2.16
PABPN1-202ENST00000397276 CRYBG1Q9Y4K1 1723 aa28.53■■■□□ 2.16
PABPN1-202ENST00000397276 COL9A3Q14050 684 aaPredicted RBP28.52■■■□□ 2.16
PABPN1-202ENST00000397276 NECTIN1Q15223 517 aa28.52■■■□□ 2.16
PABPN1-202ENST00000397276 SLAIN2Q9P270 581 aa28.52■■■□□ 2.16
PABPN1-202ENST00000397276 DBNLQ9UJU6 430 aaKnown RBP28.52■■■□□ 2.16
PABPN1-202ENST00000397276 TMEM63CQ9P1W3 806 aa28.52■■■□□ 2.16
PABPN1-202ENST00000397276 ZBTB3Q9H5J0 574 aa28.51■■■□□ 2.16
PABPN1-202ENST00000397276 PCDH11XQ9BZA7 1347 aa28.51■■■□□ 2.15
PABPN1-202ENST00000397276 PCDH11YQ9BZA8 1340 aa28.51■■■□□ 2.15
PABPN1-202ENST00000397276 CHGBP05060 677 aa28.5■■■□□ 2.15
PABPN1-202ENST00000397276 TNNI3KQ59H18 835 aa28.5■■■□□ 2.15
PABPN1-202ENST00000397276 CREB3L3Q68CJ9 461 aa28.5■■■□□ 2.15
PABPN1-202ENST00000397276 CCDC83Q8IWF9 413 aa28.5■■■□□ 2.15
PABPN1-202ENST00000397276 RBSNQ9H1K0 784 aa28.5■■■□□ 2.15
PABPN1-202ENST00000397276 ZNF330Q9Y3S2 320 aaPredicted RBP28.5■■■□□ 2.15
PABPN1-202ENST00000397276 CYP46A1Q9Y6A2 500 aa28.5■■■□□ 2.15
PABPN1-202ENST00000397276 FPGT-TNNI3KV9GXZ4 949 aa28.5■■■□□ 2.15
PABPN1-202ENST00000397276 ZKSCAN1P17029 563 aaPredicted RBP28.5■■■□□ 2.15
PABPN1-202ENST00000397276 MRC1P22897 1456 aa28.5■■■□□ 2.15
PABPN1-202ENST00000397276 PRIM1P49642 420 aaKnown RBP28.5■■■□□ 2.15
PABPN1-202ENST00000397276 ZNF445P59923 1031 aa28.5■■■□□ 2.15
PABPN1-202ENST00000397276 ANP32BQ92688 251 aaKnown RBP28.5■■■□□ 2.15
PABPN1-202ENST00000397276 DNAJC2Q99543 621 aaKnown RBP28.5■■■□□ 2.15
PABPN1-202ENST00000397276 TPM2P07951 284 aa28.49■■■□□ 2.15
PABPN1-202ENST00000397276 HIP1O00291 1037 aa28.49■■■□□ 2.15
PABPN1-202ENST00000397276 RBM10P98175 930 aaKnown RBP28.49■■■□□ 2.15
PABPN1-202ENST00000397276 ZNF589Q86UQ0 364 aaPredicted RBP28.49■■■□□ 2.15
PABPN1-202ENST00000397276 TCEANC2Q96MN5 208 aa28.49■■■□□ 2.15
PABPN1-202ENST00000397276 WDR33Q9C0J8 1336 aaKnown RBP28.49■■■□□ 2.15
PABPN1-202ENST00000397276 EVA1CP58658 441 aa28.48■■■□□ 2.15
PABPN1-202ENST00000397276 MAP4K1Q92918 833 aa28.48■■■□□ 2.15
PABPN1-202ENST00000397276 DBNDD2Q9BQY9 259 aa28.48■■■□□ 2.15
PABPN1-202ENST00000397276 SMC3Q9UQE7 1217 aa28.48■■■□□ 2.15
PABPN1-202ENST00000397276 ZNF335Q9H4Z2 1342 aaPredicted RBP28.48■■■□□ 2.15
PABPN1-202ENST00000397276 SYCE3A1L190 88 aa28.48■■■□□ 2.15
PABPN1-202ENST00000397276 RABL6Q3YEC7 729 aaPredicted RBP28.48■■■□□ 2.15
PABPN1-202ENST00000397276 ZSWIM6Q9HCJ5 1215 aa28.48■■■□□ 2.15
PABPN1-202ENST00000397276 MSNP26038 577 aaKnown RBP28.47■■■□□ 2.15
PABPN1-202ENST00000397276 TAF6LQ9Y6J9 622 aa28.47■■■□□ 2.15
PABPN1-202ENST00000397276 RPAP1Q9BWH6 1393 aaPredicted RBP28.47■■■□□ 2.15
PABPN1-202ENST00000397276 IL2RBP14784 551 aa28.47■■■□□ 2.15
PABPN1-202ENST00000397276 CASP7P55210 303 aa28.46■■■□□ 2.15
PABPN1-202ENST00000397276 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.46■■■□□ 2.15
PABPN1-202ENST00000397276 GADD45BO75293 160 aaPredicted RBP28.46■■■□□ 2.15
PABPN1-202ENST00000397276 OFD1O75665 1012 aa28.46■■■□□ 2.15
PABPN1-202ENST00000397276 VPS53Q5VIR6 699 aa28.46■■■□□ 2.15
PABPN1-202ENST00000397276 NECAB1Q8N987 351 aa28.46■■■□□ 2.15
PABPN1-202ENST00000397276 SLC27A2O14975 620 aa28.45■■■□□ 2.15
PABPN1-202ENST00000397276 SYT1P21579 422 aa28.45■■■□□ 2.15
PABPN1-202ENST00000397276 NEUROD6Q96NK8 337 aa28.45■■■□□ 2.14
PABPN1-202ENST00000397276 USP48Q86UV5 1035 aa28.44■■■□□ 2.14
PABPN1-202ENST00000397276 ERVV-2B6SEH9 535 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms