RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 HS1BP3Q53T59 392 aa14.39□□□□□ -0.11
ITGA4-203ENST00000397033 ALKQ9UM73 1620 aa14.39□□□□□ -0.11
ITGA4-203ENST00000397033 GJB2P29033 226 aa14.39□□□□□ -0.11
ITGA4-203ENST00000397033 CCDC144CPQ8IYA2 1237 aa14.39□□□□□ -0.11
ITGA4-203ENST00000397033 CKAP2LQ8IYA6 745 aa14.39□□□□□ -0.11
ITGA4-203ENST00000397033 C16orf45Q96MC5 204 aaPredicted RBP14.39□□□□□ -0.11
ITGA4-203ENST00000397033 SDF4Q9BRK5 362 aa14.39□□□□□ -0.11
ITGA4-203ENST00000397033 LIMCH1Q9UPQ0 1083 aa14.39□□□□□ -0.11
ITGA4-203ENST00000397033 NPHP3Q7Z494 1330 aa14.39□□□□□ -0.11
ITGA4-203ENST00000397033 ERICH4A6NGS2 130 aa14.38□□□□□ -0.11
ITGA4-203ENST00000397033 LDHAL6AQ6ZMR3 332 aa14.38□□□□□ -0.11
ITGA4-203ENST00000397033 RASSF8Q8NHQ8 419 aa14.38□□□□□ -0.11
ITGA4-203ENST00000397033 FAM135BQ49AJ0 1406 aa14.38□□□□□ -0.11
ITGA4-203ENST00000397033 GIGYF1O75420 1035 aaPredicted RBP14.38□□□□□ -0.11
ITGA4-203ENST00000397033 AK2P54819 239 aa14.38□□□□□ -0.11
ITGA4-203ENST00000397033 AEBP2Q6ZN18 517 aaPredicted RBP14.38□□□□□ -0.11
ITGA4-203ENST00000397033 USP48Q86UV5 1035 aa14.38□□□□□ -0.11
ITGA4-203ENST00000397033 GPT2Q8TD30 523 aa14.38□□□□□ -0.11
ITGA4-203ENST00000397033 CCDC94Q9BW85 323 aaPredicted RBP14.38□□□□□ -0.11
ITGA4-203ENST00000397033 DDX21Q9NR30 783 aaKnown RBP eCLIP14.38□□□□□ -0.11
ITGA4-203ENST00000397033 CNPY2Q9Y2B0 182 aa14.38□□□□□ -0.11
ITGA4-203ENST00000397033 STARD3NLO95772 234 aa14.37□□□□□ -0.11
ITGA4-203ENST00000397033 PLEKHG1Q9ULL1 1385 aa14.37□□□□□ -0.11
ITGA4-203ENST00000397033 IGSF1Q8N6C5 1336 aa14.37□□□□□ -0.11
ITGA4-203ENST00000397033 IFIT5Q13325 482 aaKnown RBP14.37□□□□□ -0.11
ITGA4-203ENST00000397033 EVI5LQ96CN4 794 aa14.37□□□□□ -0.11
ITGA4-203ENST00000397033 HIP1O00291 1037 aa14.37□□□□□ -0.11
ITGA4-203ENST00000397033 SIRT1Q96EB6 747 aa14.37□□□□□ -0.11
ITGA4-203ENST00000397033 DBNDD2Q9BQY9 259 aa14.37□□□□□ -0.11
ITGA4-203ENST00000397033 CWC25Q9NXE8 425 aaPredicted RBP14.37□□□□□ -0.11
ITGA4-203ENST00000397033 ME1P48163 572 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 SYNE3Q6ZMZ3 975 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 BRF1Q92994 677 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 TRERF1Q96PN7 1200 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 CCDC192P0DO97 292 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 QRICH2Q9H0J4 1663 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 CCDC183Q5T5S1 534 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 CCDC112Q8NEF3 446 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 NUP133Q8WUM0 1156 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 BTG4Q9NY30 223 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 CAMSAP1Q5T5Y3 1602 aa14.36□□□□□ -0.11
ITGA4-203ENST00000397033 AATKQ6ZMQ8 1374 aa14.35□□□□□ -0.11
ITGA4-203ENST00000397033 MEX3CQ5U5Q3 659 aaKnown RBP14.35□□□□□ -0.11
ITGA4-203ENST00000397033 NSFL1CQ9UNZ2 370 aaKnown RBP14.35□□□□□ -0.11
ITGA4-203ENST00000397033 PTPRMP28827 1452 aa14.35□□□□□ -0.11
ITGA4-203ENST00000397033 EXOC5O00471 708 aa14.35□□□□□ -0.11
ITGA4-203ENST00000397033 TTLL7Q6ZT98 887 aa14.35□□□□□ -0.11
ITGA4-203ENST00000397033 CCDC24Q8N4L8 307 aa14.35□□□□□ -0.11
ITGA4-203ENST00000397033 STX6O43752 255 aa14.35□□□□□ -0.11
ITGA4-203ENST00000397033 GADD45BO75293 160 aaPredicted RBP14.35□□□□□ -0.11
ITGA4-203ENST00000397033 LRRFIP1Q32MZ4 808 aaKnown RBP14.35□□□□□ -0.11
ITGA4-203ENST00000397033 CPLX2Q6PUV4 134 aaKnown RBP14.35□□□□□ -0.11
ITGA4-203ENST00000397033 SPATA32Q96LK8 384 aa14.35□□□□□ -0.11
ITGA4-203ENST00000397033 TLR7Q9NYK1 1049 aaKnown RBP14.35□□□□□ -0.11
ITGA4-203ENST00000397033 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 AKAP17AQ02040 695 aaKnown RBP14.34□□□□□ -0.11
ITGA4-203ENST00000397033 SAMD1Q6SPF0 538 aaPredicted RBP14.34□□□□□ -0.11
ITGA4-203ENST00000397033 SMAP1Q8IYB5 467 aaPredicted RBP14.34□□□□□ -0.11
ITGA4-203ENST00000397033 G3V3G9 751 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 ZNF500O60304 480 aaPredicted RBP14.34□□□□□ -0.11
ITGA4-203ENST00000397033 LETM1O95202 739 aaPredicted RBP14.34□□□□□ -0.11
ITGA4-203ENST00000397033 KRT85P78386 507 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 DCAF8Q5TAQ9 597 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 CCDC73Q6ZRK6 1079 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 EAF2Q96CJ1 260 aaPredicted RBP14.34□□□□□ -0.11
ITGA4-203ENST00000397033 SEC62Q99442 399 aaKnown RBP14.34□□□□□ -0.11
ITGA4-203ENST00000397033 PES1O00541 588 aaKnown RBP14.34□□□□□ -0.11
ITGA4-203ENST00000397033 DNM1Q05193 864 aaKnown RBP14.34□□□□□ -0.11
ITGA4-203ENST00000397033 ARHGEF25Q86VW2 580 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 PRIMPOLQ96LW4 560 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 TRIM29Q14134 588 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 BEND3Q5T5X7 828 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 FILIP1Q7Z7B0 1213 aa14.34□□□□□ -0.11
ITGA4-203ENST00000397033 CCAR2Q8N163 923 aaKnown RBP14.33□□□□□ -0.12
ITGA4-203ENST00000397033 ATP7BP35670 1465 aa14.33□□□□□ -0.12
ITGA4-203ENST00000397033 FRMPD1Q5SYB0 1578 aa14.33□□□□□ -0.12
ITGA4-203ENST00000397033 ALDH1L1O75891 902 aa14.33□□□□□ -0.12
ITGA4-203ENST00000397033 SLC52A2Q9HAB3 445 aa14.33□□□□□ -0.12
ITGA4-203ENST00000397033 LRP2BPQ9P2M1 347 aa14.33□□□□□ -0.12
ITGA4-203ENST00000397033 MINDY4BA8MYZ0 360 aa14.33□□□□□ -0.12
ITGA4-203ENST00000397033 PDCP20941 246 aa14.33□□□□□ -0.12
ITGA4-203ENST00000397033 HOMER1Q86YM7 354 aa14.33□□□□□ -0.12
ITGA4-203ENST00000397033 JAG2Q9Y219 1238 aa14.33□□□□□ -0.12
ITGA4-203ENST00000397033 CPS1P31327 1500 aa14.32□□□□□ -0.12
ITGA4-203ENST00000397033 PNPLA6Q8IY17 1366 aa14.32□□□□□ -0.12
ITGA4-203ENST00000397033 PTH1RQ03431 593 aa14.32□□□□□ -0.12
ITGA4-203ENST00000397033 DCAF5Q96JK2 942 aa14.32□□□□□ -0.12
ITGA4-203ENST00000397033 ARHGEF10O15013 1369 aa14.32□□□□□ -0.12
ITGA4-203ENST00000397033 U2AF2P26368 475 aaKnown RBP eCLIP14.32□□□□□ -0.12
ITGA4-203ENST00000397033 TNMDQ9H2S6 317 aa14.32□□□□□ -0.12
ITGA4-203ENST00000397033 ARHGEF40Q8TER5 1519 aa14.32□□□□□ -0.12
ITGA4-203ENST00000397033 BBXQ8WY36 941 aaPredicted RBP14.32□□□□□ -0.12
ITGA4-203ENST00000397033 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.32□□□□□ -0.12
ITGA4-203ENST00000397033 V9GYY5 206 aaPredicted RBP14.32□□□□□ -0.12
ITGA4-203ENST00000397033 LRRC7Q96NW7 1537 aa14.32□□□□□ -0.12
ITGA4-203ENST00000397033 CLTCQ00610 1675 aaKnown RBP14.31□□□□□ -0.12
ITGA4-203ENST00000397033 DHX16O60231 1041 aaKnown RBP14.31□□□□□ -0.12
ITGA4-203ENST00000397033 POLR3DP05423 398 aaPredicted RBP14.31□□□□□ -0.12
ITGA4-203ENST00000397033 IL2RBP14784 551 aa14.31□□□□□ -0.12
ITGA4-203ENST00000397033 RXRAP19793 462 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms