RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 CFAP44Q96MT7 982 aa24.6■■□□□ 1.53
MCF2L-207ENST00000397024 DDNO94850 711 aaPredicted RBP24.59■■□□□ 1.53
MCF2L-207ENST00000397024 HTRA3P83110 453 aa24.59■■□□□ 1.53
MCF2L-207ENST00000397024 PARP10Q53GL7 1025 aa24.59■■□□□ 1.53
MCF2L-207ENST00000397024 SLC51AQ86UW1 340 aa24.59■■□□□ 1.53
MCF2L-207ENST00000397024 CHPF2Q9P2E5 772 aa24.59■■□□□ 1.53
MCF2L-207ENST00000397024 ZNF853P0CG23 659 aa24.58■■□□□ 1.53
MCF2L-207ENST00000397024 PPP1R42Q7Z4L9 355 aa24.58■■□□□ 1.53
MCF2L-207ENST00000397024 RTKN2Q8IZC4 609 aa24.58■■□□□ 1.53
MCF2L-207ENST00000397024 MBIPQ9NS73 344 aa24.58■■□□□ 1.53
MCF2L-207ENST00000397024 RIC1Q4ADV7 1423 aa24.58■■□□□ 1.53
MCF2L-207ENST00000397024 SLC10A5Q5PT55 438 aa24.57■■□□□ 1.52
MCF2L-207ENST00000397024 SYNE4Q8N205 404 aa24.57■■□□□ 1.52
MCF2L-207ENST00000397024 RPGRQ92834 1020 aaKnown RBP24.57■■□□□ 1.52
MCF2L-207ENST00000397024 UTP14AQ9BVJ6 771 aaKnown RBP24.57■■□□□ 1.52
MCF2L-207ENST00000397024 WDR90Q96KV7 1748 aa24.57■■□□□ 1.52
MCF2L-207ENST00000397024 SNED1Q8TER0 1413 aa24.56■■□□□ 1.52
MCF2L-207ENST00000397024 HDGFL1Q5TGJ6 251 aa24.56■■□□□ 1.52
MCF2L-207ENST00000397024 DUSP27Q5VZP5 1158 aa24.56■■□□□ 1.52
MCF2L-207ENST00000397024 NLRP10Q86W26 655 aa24.56■■□□□ 1.52
MCF2L-207ENST00000397024 SMC1BQ8NDV3 1235 aa24.56■■□□□ 1.52
MCF2L-207ENST00000397024 TCIRG1Q13488 830 aa24.55■■□□□ 1.52
MCF2L-207ENST00000397024 CRAMP1Q96RY5 1269 aa24.55■■□□□ 1.52
MCF2L-207ENST00000397024 HOXB7P09629 217 aa24.54■■□□□ 1.52
MCF2L-207ENST00000397024 ZNF428Q96B54 188 aa24.54■■□□□ 1.52
MCF2L-207ENST00000397024 RBM17Q96I25 401 aaKnown RBP24.53■■□□□ 1.52
MCF2L-207ENST00000397024 NLRP3Q96P20 1036 aa24.53■■□□□ 1.52
MCF2L-207ENST00000397024 TCERG1O14776 1098 aaKnown RBP24.52■■□□□ 1.52
MCF2L-207ENST00000397024 HCLS1P14317 486 aaPredicted RBP24.52■■□□□ 1.52
MCF2L-207ENST00000397024 IARSP41252 1262 aaKnown RBP24.52■■□□□ 1.52
MCF2L-207ENST00000397024 HSP90AB3PQ58FF7 597 aa24.52■■□□□ 1.52
MCF2L-207ENST00000397024 ZNF541Q9H0D2 1346 aa24.52■■□□□ 1.52
MCF2L-207ENST00000397024 ZEB1P37275 1124 aaPredicted RBP24.51■■□□□ 1.51
MCF2L-207ENST00000397024 PSMD1Q99460 953 aa24.51■■□□□ 1.51
MCF2L-207ENST00000397024 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
MCF2L-207ENST00000397024 DBF4Q9UBU7 674 aaPredicted RBP24.51■■□□□ 1.51
MCF2L-207ENST00000397024 ANKRD36CQ5JPF3 1778 aa24.51■■□□□ 1.51
MCF2L-207ENST00000397024 ELL2O00472 640 aaPredicted RBP24.5■■□□□ 1.51
MCF2L-207ENST00000397024 POTEIP0CG38 1075 aa24.5■■□□□ 1.51
MCF2L-207ENST00000397024 POTEJP0CG39 1038 aa24.5■■□□□ 1.51
MCF2L-207ENST00000397024 CC2D2BQ6DHV5 1058 aa24.5■■□□□ 1.51
MCF2L-207ENST00000397024 ANKRD13DQ6ZTN6 518 aa24.5■■□□□ 1.51
MCF2L-207ENST00000397024 PLBD2Q8NHP8 589 aa24.5■■□□□ 1.51
MCF2L-207ENST00000397024 TRMT112Q9UI30 125 aaKnown RBP24.5■■□□□ 1.51
MCF2L-207ENST00000397024 GNAI1P63096 354 aa24.49■■□□□ 1.51
MCF2L-207ENST00000397024 FZD9O00144 591 aa24.48■■□□□ 1.51
MCF2L-207ENST00000397024 PPEF1O14829 653 aaPredicted RBP24.48■■□□□ 1.51
MCF2L-207ENST00000397024 C8orf58Q8NAV2 365 aa24.48■■□□□ 1.51
MCF2L-207ENST00000397024 L3MBTL3Q96JM7 780 aaPredicted RBP24.48■■□□□ 1.51
MCF2L-207ENST00000397024 HYPKQ9NX55 129 aa24.48■■□□□ 1.51
MCF2L-207ENST00000397024 PCNTO95613 3336 aa24.48■■□□□ 1.51
MCF2L-207ENST00000397024 COL4A5P29400 1685 aa24.47■■□□□ 1.51
MCF2L-207ENST00000397024 RNF123Q5XPI4 1314 aa24.47■■□□□ 1.51
MCF2L-207ENST00000397024 ISCA1Q9BUE6 129 aa24.47■■□□□ 1.51
MCF2L-207ENST00000397024 ABCC4O15439 1325 aa24.46■■□□□ 1.51
MCF2L-207ENST00000397024 ATP5J2-PTCD1G3V325 749 aa24.46■■□□□ 1.51
MCF2L-207ENST00000397024 LAMB2P55268 1798 aa24.45■■□□□ 1.5
MCF2L-207ENST00000397024 CALD1Q05682 793 aaKnown RBP24.45■■□□□ 1.5
MCF2L-207ENST00000397024 TAF1DQ9H5J8 278 aaPredicted RBP24.45■■□□□ 1.5
MCF2L-207ENST00000397024 PHAXQ9H814 394 aaKnown RBP24.45■■□□□ 1.5
MCF2L-207ENST00000397024 ATP6V0A2Q9Y487 856 aa24.45■■□□□ 1.5
MCF2L-207ENST00000397024 SH3TC1Q8TE82 1336 aa24.44■■□□□ 1.5
MCF2L-207ENST00000397024 ZNF316A6NFI3 1004 aaPredicted RBP24.44■■□□□ 1.5
MCF2L-207ENST00000397024 KLRG1Q96E93 195 aa24.44■■□□□ 1.5
MCF2L-207ENST00000397024 GRIPAP1Q4V328 841 aa24.43■■□□□ 1.5
MCF2L-207ENST00000397024 CHADLQ6NUI6 762 aa24.43■■□□□ 1.5
MCF2L-207ENST00000397024 FAM89AQ96GI7 184 aa24.43■■□□□ 1.5
MCF2L-207ENST00000397024 IQCA1LA6NCM1 817 aa24.42■■□□□ 1.5
MCF2L-207ENST00000397024 TSPYL6Q8N831 410 aa24.42■■□□□ 1.5
MCF2L-207ENST00000397024 JDP2Q8WYK2 163 aa24.42■■□□□ 1.5
MCF2L-207ENST00000397024 TAF1P21675 1872 aa24.42■■□□□ 1.5
MCF2L-207ENST00000397024 SCN4AP35499 1836 aa24.41■■□□□ 1.5
MCF2L-207ENST00000397024 BBOX1O75936 387 aa24.41■■□□□ 1.5
MCF2L-207ENST00000397024 LARGE2Q8N3Y3 721 aa24.41■■□□□ 1.5
MCF2L-207ENST00000397024 TRIM28Q13263 835 aaKnown RBP24.4■■□□□ 1.5
MCF2L-207ENST00000397024 RTL5Q5HYW3 569 aaPredicted RBP24.4■■□□□ 1.5
MCF2L-207ENST00000397024 SP8Q8IXZ3 490 aa24.4■■□□□ 1.5
MCF2L-207ENST00000397024 DDX46Q7L014 1031 aaKnown RBP24.39■■□□□ 1.49
MCF2L-207ENST00000397024 RIC3Q7Z5B4 369 aa24.39■■□□□ 1.49
MCF2L-207ENST00000397024 GPC2Q8N158 579 aa24.39■■□□□ 1.49
MCF2L-207ENST00000397024 TSR2Q969E8 191 aaKnown RBP24.39■■□□□ 1.49
MCF2L-207ENST00000397024 HACL1Q9UJ83 578 aa24.39■■□□□ 1.49
MCF2L-207ENST00000397024 GRAPQ13588 217 aa24.38■■□□□ 1.49
MCF2L-207ENST00000397024 WWC1Q8IX03 1113 aa24.38■■□□□ 1.49
MCF2L-207ENST00000397024 JMYQ8N9B5 988 aa24.38■■□□□ 1.49
MCF2L-207ENST00000397024 GRAPLQ8TC17 118 aaPredicted RBP24.38■■□□□ 1.49
MCF2L-207ENST00000397024 GJA3Q9Y6H8 435 aa24.38■■□□□ 1.49
MCF2L-207ENST00000397024 DDX60Q8IY21 1712 aaKnown RBP24.38■■□□□ 1.49
MCF2L-207ENST00000397024 EPHX2P34913 555 aa24.37■■□□□ 1.49
MCF2L-207ENST00000397024 EIF6P56537 245 aaKnown RBP24.37■■□□□ 1.49
MCF2L-207ENST00000397024 AOC3Q16853 763 aa24.37■■□□□ 1.49
MCF2L-207ENST00000397024 CCDC27Q2M243 656 aa24.37■■□□□ 1.49
MCF2L-207ENST00000397024 LDHDQ86WU2 507 aa24.37■■□□□ 1.49
MCF2L-207ENST00000397024 RTFDC1Q9BY42 306 aaPredicted RBP24.37■■□□□ 1.49
MCF2L-207ENST00000397024 MRS2Q9HD23 443 aa24.37■■□□□ 1.49
MCF2L-207ENST00000397024 PPIP5K2O43314 1243 aa24.36■■□□□ 1.49
MCF2L-207ENST00000397024 GOLGA2Q08379 1002 aa24.36■■□□□ 1.49
MCF2L-207ENST00000397024 SF3B3Q15393 1217 aaKnown RBP24.36■■□□□ 1.49
MCF2L-207ENST00000397024 EAPPQ56P03 285 aaPredicted RBP24.36■■□□□ 1.49
MCF2L-207ENST00000397024 TMX4Q9H1E5 349 aaPredicted RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms