RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
MCF2L-206ENST00000397021 NPR1P16066 1061 aa12.44□□□□□ -0.42
MCF2L-206ENST00000397021 PRPF40BQ6NWY9 871 aaKnown RBP12.44□□□□□ -0.42
MCF2L-206ENST00000397021 ZNF526Q8TF50 670 aaPredicted RBP12.44□□□□□ -0.42
MCF2L-206ENST00000397021 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
MCF2L-206ENST00000397021 CDCA7LQ96GN5 454 aa12.44□□□□□ -0.42
MCF2L-206ENST00000397021 ISCA1Q9BUE6 129 aa12.44□□□□□ -0.42
MCF2L-206ENST00000397021 C9orf131Q5VYM1 1079 aa12.43□□□□□ -0.42
MCF2L-206ENST00000397021 OLFM4Q6UX06 510 aa12.43□□□□□ -0.42
MCF2L-206ENST00000397021 JARID2Q92833 1246 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-206ENST00000397021 CHMP4AQ9BY43 222 aa12.43□□□□□ -0.42
MCF2L-206ENST00000397021 MAP3K2Q9Y2U5 619 aa12.43□□□□□ -0.42
MCF2L-206ENST00000397021 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
MCF2L-206ENST00000397021 PI4KAP2A4QPH2 592 aa12.42□□□□□ -0.42
MCF2L-206ENST00000397021 DDX58O95786 925 aaKnown RBP12.42□□□□□ -0.42
MCF2L-206ENST00000397021 PRELPP51888 382 aa12.42□□□□□ -0.42
MCF2L-206ENST00000397021 SLC51AQ86UW1 340 aa12.42□□□□□ -0.42
MCF2L-206ENST00000397021 PI4KAP1Q8N8J0 262 aa12.42□□□□□ -0.42
MCF2L-206ENST00000397021 RPGRQ92834 1020 aaKnown RBP12.42□□□□□ -0.42
MCF2L-206ENST00000397021 FAM89AQ96GI7 184 aa12.42□□□□□ -0.42
MCF2L-206ENST00000397021 ANKRD31Q8N7Z5 1873 aa12.42□□□□□ -0.42
MCF2L-206ENST00000397021 SH3TC1Q8TE82 1336 aa12.41□□□□□ -0.42
MCF2L-206ENST00000397021 NFKBIEO00221 500 aa12.41□□□□□ -0.42
MCF2L-206ENST00000397021 COL11A2P13942 1736 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-206ENST00000397021 SLFN5Q08AF3 891 aa12.41□□□□□ -0.42
MCF2L-206ENST00000397021 CRY2Q49AN0 593 aa12.41□□□□□ -0.42
MCF2L-206ENST00000397021 SLC10A5Q5PT55 438 aa12.41□□□□□ -0.42
MCF2L-206ENST00000397021 KSR2Q6VAB6 950 aa12.41□□□□□ -0.42
MCF2L-206ENST00000397021 NLRP3Q96P20 1036 aa12.41□□□□□ -0.42
MCF2L-206ENST00000397021 METTL22Q9BUU2 404 aaPredicted RBP12.41□□□□□ -0.42
MCF2L-206ENST00000397021 RNF181Q9P0P0 153 aa12.41□□□□□ -0.42
MCF2L-206ENST00000397021 UTRNP46939 3433 aa12.41□□□□□ -0.42
MCF2L-206ENST00000397021 E9PSI1 815 aa12.4□□□□□ -0.42
MCF2L-206ENST00000397021 FLIIQ13045 1269 aa12.4□□□□□ -0.42
MCF2L-206ENST00000397021 TNRC6CQ9HCJ0 1690 aaKnown RBP12.4□□□□□ -0.42
MCF2L-206ENST00000397021 ADCY9O60503 1353 aa12.4□□□□□ -0.42
MCF2L-206ENST00000397021 GOLGB1Q14789 3259 aaKnown RBP12.4□□□□□ -0.43
MCF2L-206ENST00000397021 ALDH1B1P30837 517 aa12.39□□□□□ -0.43
MCF2L-206ENST00000397021 HOXA10P31260 410 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-206ENST00000397021 FKBP5Q13451 457 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-206ENST00000397021 CWF19L2Q2TBE0 894 aaKnown RBP12.39□□□□□ -0.43
MCF2L-206ENST00000397021 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
MCF2L-206ENST00000397021 RBM17Q96I25 401 aaKnown RBP12.39□□□□□ -0.43
MCF2L-206ENST00000397021 NUP98P52948 1817 aa12.39□□□□□ -0.43
MCF2L-206ENST00000397021 F6X3S4 739 aa12.38□□□□□ -0.43
MCF2L-206ENST00000397021 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-206ENST00000397021 IGKV5-2P06315 115 aa12.38□□□□□ -0.43
MCF2L-206ENST00000397021 TRIM28Q13263 835 aaKnown RBP12.38□□□□□ -0.43
MCF2L-206ENST00000397021 CWC25Q9NXE8 425 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-206ENST00000397021 BRCA1P38398 1863 aaKnown RBP12.38□□□□□ -0.43
MCF2L-206ENST00000397021 ABCC4O15439 1325 aa12.37□□□□□ -0.43
MCF2L-206ENST00000397021 RNF123Q5XPI4 1314 aa12.37□□□□□ -0.43
MCF2L-206ENST00000397021 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
MCF2L-206ENST00000397021 PPEF1O14829 653 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-206ENST00000397021 LMNB1P20700 586 aa12.37□□□□□ -0.43
MCF2L-206ENST00000397021 CCDC93Q567U6 631 aa12.37□□□□□ -0.43
MCF2L-206ENST00000397021 ZBTB38Q8NAP3 1195 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-206ENST00000397021 CCDC191Q8NCU4 936 aa12.37□□□□□ -0.43
MCF2L-206ENST00000397021 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-206ENST00000397021 CRAMP1Q96RY5 1269 aa12.37□□□□□ -0.43
MCF2L-206ENST00000397021 TAOK3Q9H2K8 898 aa12.37□□□□□ -0.43
MCF2L-206ENST00000397021 GPBP1L1Q9HC44 474 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-206ENST00000397021 HNRNPUQ00839 825 aaKnown RBP eCLIP12.36□□□□□ -0.43
MCF2L-206ENST00000397021 NEXNQ0ZGT2 675 aa12.36□□□□□ -0.43
MCF2L-206ENST00000397021 SOGA3Q5TF21 947 aa12.36□□□□□ -0.43
MCF2L-206ENST00000397021 DNAAF4Q8WXU2 420 aa12.36□□□□□ -0.43
MCF2L-206ENST00000397021 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
MCF2L-206ENST00000397021 DLEC1Q9Y238 1755 aa12.35□□□□□ -0.43
MCF2L-206ENST00000397021 NEURL1BA8MQ27 555 aa12.35□□□□□ -0.43
MCF2L-206ENST00000397021 PCCAP05165 728 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-206ENST00000397021 DDX46Q7L014 1031 aaKnown RBP12.35□□□□□ -0.43
MCF2L-206ENST00000397021 TRMT2AQ8IZ69 625 aaKnown RBP12.35□□□□□ -0.43
MCF2L-206ENST00000397021 ZNF277Q9NRM2 450 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-206ENST00000397021 SLX4Q8IY92 1834 aa12.34□□□□□ -0.43
MCF2L-206ENST00000397021 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
MCF2L-206ENST00000397021 MRPL50Q8N5N7 158 aaKnown RBP12.34□□□□□ -0.43
MCF2L-206ENST00000397021 SSH1Q8WYL5 1049 aa12.34□□□□□ -0.43
MCF2L-206ENST00000397021 CELF1Q92879 486 aaKnown RBP12.34□□□□□ -0.43
MCF2L-206ENST00000397021 ARFGEF2Q9Y6D5 1785 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 ARFGEF1Q9Y6D6 1849 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 GRAPQ13588 217 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 GCKRQ14397 625 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 SF3B3Q15393 1217 aaKnown RBP12.33□□□□□ -0.44
MCF2L-206ENST00000397021 SLC4A10Q6U841 1118 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 UBE3BQ7Z3V4 1068 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 RTKN2Q8IZC4 609 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 GRAPLQ8TC17 118 aaPredicted RBP12.33□□□□□ -0.44
MCF2L-206ENST00000397021 NMRK2Q9NPI5 230 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 SEC31BQ9NQW1 1179 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 LTBP3Q9NS15 1303 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 ANKRD36CQ5JPF3 1778 aa12.33□□□□□ -0.44
MCF2L-206ENST00000397021 PDE8AO60658 829 aa12.32□□□□□ -0.44
MCF2L-206ENST00000397021 BBOX1O75936 387 aa12.32□□□□□ -0.44
MCF2L-206ENST00000397021 BEND3Q5T5X7 828 aa12.32□□□□□ -0.44
MCF2L-206ENST00000397021 LINS1Q8NG48 757 aa12.32□□□□□ -0.44
MCF2L-206ENST00000397021 ATP6V0A2Q9Y487 856 aa12.32□□□□□ -0.44
MCF2L-206ENST00000397021 CHD4Q14839 1912 aa12.32□□□□□ -0.44
MCF2L-206ENST00000397021 H7C1W4 665 aa12.31□□□□□ -0.44
MCF2L-206ENST00000397021 IARSP41252 1262 aaKnown RBP12.31□□□□□ -0.44
MCF2L-206ENST00000397021 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms