RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 ERFEQ4G0M1 354 aa37.45■■■■□ 3.59
CHCHD4-202ENST00000396914 NTSR2O95665 410 aa37.44■■■■□ 3.58
CHCHD4-202ENST00000396914 C2CD5Q86YS7 1000 aa37.44■■■■□ 3.58
CHCHD4-202ENST00000396914 DNAAF4Q8WXU2 420 aa37.44■■■■□ 3.58
CHCHD4-202ENST00000396914 IBTKQ9P2D0 1353 aaPredicted RBP37.43■■■■□ 3.58
CHCHD4-202ENST00000396914 F6X3S4 739 aa37.42■■■■□ 3.58
CHCHD4-202ENST00000396914 H0YIN7 160 aa37.42■■■■□ 3.58
CHCHD4-202ENST00000396914 RARSP54136 660 aaKnown RBP37.41■■■■□ 3.58
CHCHD4-202ENST00000396914 GPR162Q16538 588 aa37.41■■■■□ 3.58
CHCHD4-202ENST00000396914 ANKRD31Q8N7Z5 1873 aa37.39■■■■□ 3.58
CHCHD4-202ENST00000396914 TRIM28Q13263 835 aaKnown RBP37.39■■■■□ 3.58
CHCHD4-202ENST00000396914 CWC25Q9NXE8 425 aaPredicted RBP37.39■■■■□ 3.58
CHCHD4-202ENST00000396914 ABCC12Q96J65 1359 aa37.38■■■■□ 3.58
CHCHD4-202ENST00000396914 RTL5Q5HYW3 569 aaPredicted RBP37.38■■■■□ 3.57
CHCHD4-202ENST00000396914 CCDC191Q8NCU4 936 aa37.38■■■■□ 3.57
CHCHD4-202ENST00000396914 KIAA1551Q9HCM1 1747 aa37.38■■■■□ 3.57
CHCHD4-202ENST00000396914 SH3TC1Q8TE82 1336 aa37.37■■■■□ 3.57
CHCHD4-202ENST00000396914 SLC4A10Q6U841 1118 aa37.37■■■■□ 3.57
CHCHD4-202ENST00000396914 PTPRCP08575 1304 aa37.37■■■■□ 3.57
CHCHD4-202ENST00000396914 RNF123Q5XPI4 1314 aa37.37■■■■□ 3.57
CHCHD4-202ENST00000396914 CWF19L2Q2TBE0 894 aaKnown RBP37.36■■■■□ 3.57
CHCHD4-202ENST00000396914 ZNF622Q969S3 477 aaKnown RBP eCLIP37.36■■■■□ 3.57
CHCHD4-202ENST00000396914 PIM2Q9P1W9 311 aa37.36■■■■□ 3.57
CHCHD4-202ENST00000396914 PDZRN3Q9UPQ7 1066 aa37.36■■■■□ 3.57
CHCHD4-202ENST00000396914 IGKV5-2P06315 115 aa37.36■■■■□ 3.57
CHCHD4-202ENST00000396914 SYNE4Q8N205 404 aa37.36■■■■□ 3.57
CHCHD4-202ENST00000396914 FAM89AQ96GI7 184 aa37.36■■■■□ 3.57
CHCHD4-202ENST00000396914 KCNA3P22001 575 aa37.35■■■■□ 3.57
CHCHD4-202ENST00000396914 BCS1LQ9Y276 419 aa37.34■■■■□ 3.57
CHCHD4-202ENST00000396914 HCLS1P14317 486 aaPredicted RBP37.33■■■■□ 3.57
CHCHD4-202ENST00000396914 NOB1Q9ULX3 412 aaKnown RBP37.33■■■■□ 3.57
CHCHD4-202ENST00000396914 NEURL1BA8MQ27 555 aa37.32■■■■□ 3.56
CHCHD4-202ENST00000396914 LINS1Q8NG48 757 aa37.32■■■■□ 3.56
CHCHD4-202ENST00000396914 ZBTB38Q8NAP3 1195 aaPredicted RBP37.31■■■■□ 3.56
CHCHD4-202ENST00000396914 JARID2Q92833 1246 aaPredicted RBP37.31■■■■□ 3.56
CHCHD4-202ENST00000396914 NLRP3Q96P20 1036 aa37.31■■■■□ 3.56
CHCHD4-202ENST00000396914 DALRD3Q5D0E6 543 aaKnown RBP37.3■■■■□ 3.56
CHCHD4-202ENST00000396914 BCAR3O75815 825 aa37.29■■■■□ 3.56
CHCHD4-202ENST00000396914 SRGNP10124 158 aa37.29■■■■□ 3.56
CHCHD4-202ENST00000396914 KIF16BQ96L93 1317 aa37.29■■■■□ 3.56
CHCHD4-202ENST00000396914 TNRC6CQ9HCJ0 1690 aaKnown RBP37.29■■■■□ 3.56
CHCHD4-202ENST00000396914 SLC10A5Q5PT55 438 aa37.28■■■■□ 3.56
CHCHD4-202ENST00000396914 RPGRQ92834 1020 aaKnown RBP37.28■■■■□ 3.56
CHCHD4-202ENST00000396914 FRAT1Q92837 279 aaPredicted RBP37.28■■■■□ 3.56
CHCHD4-202ENST00000396914 MASTLQ96GX5 879 aa37.28■■■■□ 3.56
CHCHD4-202ENST00000396914 COL11A2P13942 1736 aaPredicted RBP37.28■■■■□ 3.56
CHCHD4-202ENST00000396914 IRS4O14654 1257 aaPredicted RBP37.27■■■■□ 3.56
CHCHD4-202ENST00000396914 PCCAP05165 728 aaPredicted RBP37.27■■■■□ 3.56
CHCHD4-202ENST00000396914 YBX3P16989 372 aaKnown RBP eCLIP37.27■■■■□ 3.561e-6■■■■□ 21
CHCHD4-202ENST00000396914 BEND3Q5T5X7 828 aa37.27■■■■□ 3.56
CHCHD4-202ENST00000396914 TTLL6Q8N841 843 aa37.27■■■■□ 3.56
CHCHD4-202ENST00000396914 RIC1Q4ADV7 1423 aa37.26■■■■□ 3.55
CHCHD4-202ENST00000396914 NPR1P16066 1061 aa37.26■■■■□ 3.55
CHCHD4-202ENST00000396914 BRPF1P55201 1214 aaPredicted RBP37.26■■■■□ 3.55
CHCHD4-202ENST00000396914 GCKRQ14397 625 aa37.26■■■■□ 3.55
CHCHD4-202ENST00000396914 DLEC1Q9Y238 1755 aa37.25■■■■□ 3.55
CHCHD4-202ENST00000396914 KLRG2A4D1S0 409 aaPredicted RBP37.25■■■■□ 3.55
CHCHD4-202ENST00000396914 STYK1Q6J9G0 422 aa37.25■■■■□ 3.55
CHCHD4-202ENST00000396914 SRCIN1Q9C0H9 1055 aa37.25■■■■□ 3.55
CHCHD4-202ENST00000396914 HSP90B1P14625 803 aaKnown RBP37.24■■■■□ 3.55
CHCHD4-202ENST00000396914 C3orf67Q6ZVT6 689 aa37.24■■■■□ 3.55
CHCHD4-202ENST00000396914 API5Q9BZZ5 524 aaKnown RBP37.24■■■■□ 3.55
CHCHD4-202ENST00000396914 CNKSR1Q969H4 720 aa37.23■■■■□ 3.55
CHCHD4-202ENST00000396914 BRCA1P38398 1863 aaKnown RBP37.23■■■■□ 3.55
CHCHD4-202ENST00000396914 IPO8O15397 1037 aaKnown RBP37.22■■■■□ 3.55
CHCHD4-202ENST00000396914 UBE3BQ7Z3V4 1068 aa37.22■■■■□ 3.55
CHCHD4-202ENST00000396914 GRIN3BO60391 1043 aa37.2■■■■□ 3.55
CHCHD4-202ENST00000396914 CRY2Q49AN0 593 aa37.2■■■■□ 3.55
CHCHD4-202ENST00000396914 RBM17Q96I25 401 aaKnown RBP37.2■■■■□ 3.55
CHCHD4-202ENST00000396914 ZNF219Q9P2Y4 722 aaPredicted RBP37.2■■■■□ 3.55
CHCHD4-202ENST00000396914 ALDH1L1O75891 902 aa37.19■■■■□ 3.54
CHCHD4-202ENST00000396914 GOLGB1Q14789 3259 aaKnown RBP37.19■■■■□ 3.54
CHCHD4-202ENST00000396914 DDX60Q8IY21 1712 aaKnown RBP37.19■■■■□ 3.54
CHCHD4-202ENST00000396914 C9orf78Q9NZ63 289 aaPredicted RBP37.19■■■■□ 3.54
CHCHD4-202ENST00000396914 ALDH1B1P30837 517 aa37.18■■■■□ 3.54
CHCHD4-202ENST00000396914 CACNA1SQ13698 1873 aa37.17■■■■□ 3.54
CHCHD4-202ENST00000396914 H7C1W4 665 aa37.17■■■■□ 3.54
CHCHD4-202ENST00000396914 PRPF40BQ6NWY9 871 aaKnown RBP37.17■■■■□ 3.54
CHCHD4-202ENST00000396914 ARHGAP45Q92619 1136 aa37.17■■■■□ 3.54
CHCHD4-202ENST00000396914 CDHR2Q9BYE9 1310 aa37.16■■■■□ 3.54
CHCHD4-202ENST00000396914 PDE8AO60658 829 aa37.16■■■■□ 3.54
CHCHD4-202ENST00000396914 LAMB2P55268 1798 aa37.15■■■■□ 3.54
CHCHD4-202ENST00000396914 DDX46Q7L014 1031 aaKnown RBP37.14■■■■□ 3.54
CHCHD4-202ENST00000396914 RCAN3Q9UKA8 241 aa37.14■■■■□ 3.54
CHCHD4-202ENST00000396914 GRM8O00222 908 aa37.13■■■■□ 3.53
CHCHD4-202ENST00000396914 ZKSCAN2Q63HK3 967 aa37.13■■■■□ 3.53
CHCHD4-202ENST00000396914 ARHGAP27Q6ZUM4 889 aa37.13■■■■□ 3.53
CHCHD4-202ENST00000396914 HOXA10P31260 410 aaPredicted RBP37.12■■■■□ 3.53
CHCHD4-202ENST00000396914 CCT4P50991 539 aaKnown RBP37.12■■■■□ 3.53
CHCHD4-202ENST00000396914 ATF7IPQ6VMQ6 1270 aa37.12■■■■□ 3.53
CHCHD4-202ENST00000396914 C21orf2O43822 256 aa37.11■■■■□ 3.53
CHCHD4-202ENST00000396914 CCDC85AQ96PX6 553 aaPredicted RBP37.11■■■■□ 3.53
CHCHD4-202ENST00000396914 ARFGEF1Q9Y6D6 1849 aa37.11■■■■□ 3.53
CHCHD4-202ENST00000396914 CLUAP1Q96AJ1 413 aa37.1■■■■□ 3.53
CHCHD4-202ENST00000396914 CRAMP1Q96RY5 1269 aa37.1■■■■□ 3.53
CHCHD4-202ENST00000396914 TRIM27P14373 513 aa37.1■■■■□ 3.53
CHCHD4-202ENST00000396914 SF3B3Q15393 1217 aaKnown RBP37.1■■■■□ 3.53
CHCHD4-202ENST00000396914 SLX4Q8IY92 1834 aa37.09■■■■□ 3.53
CHCHD4-202ENST00000396914 CCDC152Q4G0S7 254 aa37.09■■■■□ 3.53
CHCHD4-202ENST00000396914 ABCC4O15439 1325 aa37.08■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms