RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 MIS18AQ9NYP9 233 aa8.54□□□□□ -1.04
LMO3-205ENST00000396205 NFKBIEO00221 500 aa8.54□□□□□ -1.04
LMO3-205ENST00000396205 TRMT2AQ8IZ69 625 aaKnown RBP8.54□□□□□ -1.04
LMO3-205ENST00000396205 UTP14AQ9BVJ6 771 aaKnown RBP8.54□□□□□ -1.04
LMO3-205ENST00000396205 PLA2G12BQ9BX93 195 aa8.54□□□□□ -1.04
LMO3-205ENST00000396205 MRS2Q9HD23 443 aa8.54□□□□□ -1.04
LMO3-205ENST00000396205 ZBTB22O15209 634 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 FKBP4Q02790 459 aaKnown RBP eCLIP8.53□□□□□ -1.04
LMO3-205ENST00000396205 CCDC184Q52MB2 194 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 CCDC93Q567U6 631 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 CCDC191Q8NCU4 936 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 RBM46Q8TBY0 533 aaKnown RBP8.53□□□□□ -1.04
LMO3-205ENST00000396205 MYH16Q9H6N6 1097 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 CHPF2Q9P2E5 772 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 KDM2BQ8NHM5 1336 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 FANCIQ9NVI1 1328 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 CHRNA5P30532 468 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 SUSD4Q5VX71 490 aa8.53□□□□□ -1.04
LMO3-205ENST00000396205 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
LMO3-205ENST00000396205 RBM17Q96I25 401 aaKnown RBP8.53□□□□□ -1.04
LMO3-205ENST00000396205 TAF1P21675 1872 aa8.52□□□□□ -1.04
LMO3-205ENST00000396205 DDX58O95786 925 aaKnown RBP8.52□□□□□ -1.05
LMO3-205ENST00000396205 FSTL1Q12841 308 aa8.52□□□□□ -1.05
LMO3-205ENST00000396205 PROSER3Q2NL68 480 aa8.52□□□□□ -1.05
LMO3-205ENST00000396205 ANKRD13DQ6ZTN6 518 aa8.52□□□□□ -1.05
LMO3-205ENST00000396205 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
LMO3-205ENST00000396205 SH3TC1Q8TE82 1336 aa8.52□□□□□ -1.05
LMO3-205ENST00000396205 COPS6Q7L5N1 327 aa8.52□□□□□ -1.05
LMO3-205ENST00000396205 XAGE3Q8WTP9 111 aa8.52□□□□□ -1.05
LMO3-205ENST00000396205 ECM29Q5VYK3 1845 aa8.52□□□□□ -1.05
LMO3-205ENST00000396205 BBOX1O75936 387 aa8.51□□□□□ -1.05
LMO3-205ENST00000396205 PCCAP05165 728 aaPredicted RBP8.51□□□□□ -1.05
LMO3-205ENST00000396205 ZBTB38Q8NAP3 1195 aaPredicted RBP8.51□□□□□ -1.05
LMO3-205ENST00000396205 METTL22Q9BUU2 404 aaPredicted RBP8.51□□□□□ -1.05
LMO3-205ENST00000396205 SPEF2Q9C093 1822 aa8.51□□□□□ -1.05
LMO3-205ENST00000396205 KIF3CO14782 793 aa8.51□□□□□ -1.05
LMO3-205ENST00000396205 RRP7AQ9Y3A4 280 aaKnown RBP8.51□□□□□ -1.05
LMO3-205ENST00000396205 COL4A5P29400 1685 aa8.51□□□□□ -1.05
LMO3-205ENST00000396205 GLTPD2A6NH11 291 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 MMP14P50281 582 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 GOLGA2Q08379 1002 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 KSR2Q6VAB6 950 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 SP8Q8IXZ3 490 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 SUPT20HQ8NEM7 779 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 TAOK3Q9H2K8 898 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 ATP6V0A2Q9Y487 856 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 FZD9O00144 591 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 PRELPP51888 382 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 C1QTNF8P60827 252 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 C9orf131Q5VYM1 1079 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 C8orf58Q8NAV2 365 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 PODXL2Q9NZ53 605 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 UTYO14607 1347 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 COL4A1P02462 1669 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 VAMP4O75379 141 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 KLHL34Q8N239 644 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 NLRP3Q96P20 1036 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 TRPM7Q96QT4 1865 aa8.5□□□□□ -1.05
LMO3-205ENST00000396205 E9PSI1 815 aa8.49□□□□□ -1.05
LMO3-205ENST00000396205 MYL6BP14649 208 aa8.49□□□□□ -1.05
LMO3-205ENST00000396205 GRAPQ13588 217 aa8.49□□□□□ -1.05
LMO3-205ENST00000396205 CNGB1Q14028 1251 aaPredicted RBP8.49□□□□□ -1.05
LMO3-205ENST00000396205 TWISTNBQ3B726 338 aaPredicted RBP8.49□□□□□ -1.05
LMO3-205ENST00000396205 GRAPLQ8TC17 118 aaPredicted RBP8.49□□□□□ -1.05
LMO3-205ENST00000396205 ALDH1L2Q3SY69 923 aa8.49□□□□□ -1.05
LMO3-205ENST00000396205 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
LMO3-205ENST00000396205 ABCC4O15439 1325 aa8.49□□□□□ -1.05
LMO3-205ENST00000396205 PTPRCP08575 1304 aa8.49□□□□□ -1.05
LMO3-205ENST00000396205 ARHGAP27Q6ZUM4 889 aa8.49□□□□□ -1.05
LMO3-205ENST00000396205 TOMM70O94826 608 aa8.48□□□□□ -1.05
LMO3-205ENST00000396205 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
LMO3-205ENST00000396205 PPEF1O14829 653 aaPredicted RBP8.48□□□□□ -1.05
LMO3-205ENST00000396205 GPBP1L1Q9HC44 474 aaPredicted RBP8.48□□□□□ -1.05
LMO3-205ENST00000396205 CASP7P55210 303 aa8.47□□□□□ -1.05
LMO3-205ENST00000396205 BICDL1Q6ZP65 573 aa8.47□□□□□ -1.05
LMO3-205ENST00000396205 RPGRQ92834 1020 aaKnown RBP8.47□□□□□ -1.05
LMO3-205ENST00000396205 STK31Q9BXU1 1019 aa8.47□□□□□ -1.05
LMO3-205ENST00000396205 H7C1W4 665 aa8.47□□□□□ -1.05
LMO3-205ENST00000396205 PIP4K2AP48426 406 aaPredicted RBP8.47□□□□□ -1.05
LMO3-205ENST00000396205 KRT24Q2M2I5 525 aa8.47□□□□□ -1.05
LMO3-205ENST00000396205 EIF2S2P20042 333 aaKnown RBP8.47□□□□□ -1.05
LMO3-205ENST00000396205 CWC25Q9NXE8 425 aaPredicted RBP8.47□□□□□ -1.05
LMO3-205ENST00000396205 RNF181Q9P0P0 153 aa8.47□□□□□ -1.05
LMO3-205ENST00000396205 PDE8AO60658 829 aa8.46□□□□□ -1.05
LMO3-205ENST00000396205 IARSP41252 1262 aaKnown RBP8.46□□□□□ -1.05
LMO3-205ENST00000396205 SLFN5Q08AF3 891 aa8.46□□□□□ -1.05
LMO3-205ENST00000396205 LINS1Q8NG48 757 aa8.46□□□□□ -1.05
LMO3-205ENST00000396205 ALDH1L1O75891 902 aa8.46□□□□□ -1.06
LMO3-205ENST00000396205 C15orf52Q6ZUT6 534 aaKnown RBP8.46□□□□□ -1.06
LMO3-205ENST00000396205 GPC2Q8N158 579 aa8.46□□□□□ -1.06
LMO3-205ENST00000396205 CSF1RP07333 972 aa8.46□□□□□ -1.06
LMO3-205ENST00000396205 NEUROD2Q15784 382 aa8.46□□□□□ -1.06
LMO3-205ENST00000396205 TSPYL6Q8N831 410 aa8.46□□□□□ -1.06
LMO3-205ENST00000396205 IQCA1LA6NCM1 817 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 NEURL1BA8MQ27 555 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 C21orf2O43822 256 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 IGKV5-2P06315 115 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 RASSF7Q02833 373 aa8.45□□□□□ -1.06
LMO3-205ENST00000396205 FLIIQ13045 1269 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms