RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 SLIT1O75093 1534 aa10.32□□□□□ -0.76
BDNF-204ENST00000395980 EIF4A1P60842 406 aaKnown RBP10.31□□□□□ -0.76
BDNF-204ENST00000395980 RNF20Q5VTR2 975 aa10.31□□□□□ -0.76
BDNF-204ENST00000395980 ESF1Q9H501 851 aaKnown RBP10.31□□□□□ -0.76
BDNF-204ENST00000395980 TPCN1Q9ULQ1 816 aa10.31□□□□□ -0.76
BDNF-204ENST00000395980 JCADQ9P266 1359 aa10.31□□□□□ -0.76
BDNF-204ENST00000395980 ZNF75DP51815 510 aa10.31□□□□□ -0.76
BDNF-204ENST00000395980 CBX8Q9HC52 389 aa10.31□□□□□ -0.76
BDNF-204ENST00000395980 PAXBP1Q9Y5B6 917 aa10.31□□□□□ -0.76
BDNF-204ENST00000395980 ZBTB7CA1YPR0 619 aa10.31□□□□□ -0.76
BDNF-204ENST00000395980 LIG1P18858 919 aa10.31□□□□□ -0.76
BDNF-204ENST00000395980 CBX1P83916 185 aa10.31□□□□□ -0.76
BDNF-204ENST00000395980 IFIT2P09913 472 aaKnown RBP10.3□□□□□ -0.76
BDNF-204ENST00000395980 TSGA10IPQ3SY00 556 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 CDC37L1Q7L3B6 337 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 NGDNQ8NEJ9 315 aaKnown RBP10.3□□□□□ -0.76
BDNF-204ENST00000395980 HMG20BQ9P0W2 317 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 ADCY9O60503 1353 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 GOLGA6L4A6NEF3 574 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 AEBP2Q6ZN18 517 aaPredicted RBP10.3□□□□□ -0.76
BDNF-204ENST00000395980 PI4KAP2A4QPH2 592 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 SLC27A2O14975 620 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 ANO6Q4KMQ2 910 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 CCDC186Q7Z3E2 898 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 PI4KAP1Q8N8J0 262 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 LMO7Q8WWI1 1683 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 NEMFO60524 1076 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 BLOC1S2Q6QNY1 142 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 LUZP1Q86V48 1076 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 NECAB1Q8N987 351 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 SPATA32Q96LK8 384 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 DACT1Q9NYF0 836 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 OGFRQ9NZT2 677 aa10.3□□□□□ -0.76
BDNF-204ENST00000395980 MED23Q9ULK4 1368 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 NUTM2FA1L443 756 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 NCBP1Q09161 790 aaKnown RBP10.29□□□□□ -0.76
BDNF-204ENST00000395980 MLECQ14165 292 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 ZSCAN25Q6NSZ9 544 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 SARM1Q6SZW1 724 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 LEO1Q8WVC0 666 aaPredicted RBP10.29□□□□□ -0.76
BDNF-204ENST00000395980 CHPF2Q9P2E5 772 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 NPHP4O75161 1426 aaPredicted RBP10.29□□□□□ -0.76
BDNF-204ENST00000395980 RPS6KB1P23443 525 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 FAM69CQ0P6D2 419 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 CGNQ9P2M7 1197 aaKnown RBP10.29□□□□□ -0.76
BDNF-204ENST00000395980 OVOS2A0A0G2JMS6 1433 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 KCNJ4P48050 445 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 TRIM5Q9C035 493 aa10.29□□□□□ -0.76
BDNF-204ENST00000395980 RGPD8O14715 1765 aaPredicted RBP10.28□□□□□ -0.76
BDNF-204ENST00000395980 FAM177BA6PVY3 158 aa10.28□□□□□ -0.76
BDNF-204ENST00000395980 NLRP6P59044 892 aa10.28□□□□□ -0.76
BDNF-204ENST00000395980 TSPOAP1O95153 1857 aa10.28□□□□□ -0.76
BDNF-204ENST00000395980 NMIQ13287 307 aaPredicted RBP10.28□□□□□ -0.76
BDNF-204ENST00000395980 MRC1P22897 1456 aa10.28□□□□□ -0.76
BDNF-204ENST00000395980 KRT32Q14532 448 aa10.28□□□□□ -0.76
BDNF-204ENST00000395980 DRC7Q8IY82 874 aa10.28□□□□□ -0.76
BDNF-204ENST00000395980 ZHX1Q9UKY1 873 aaPredicted RBP10.28□□□□□ -0.76
BDNF-204ENST00000395980 NCAPD2Q15021 1401 aa10.27□□□□□ -0.76
BDNF-204ENST00000395980 TNNT1P13805 278 aa10.27□□□□□ -0.76
BDNF-204ENST00000395980 EIF2S2P20042 333 aaKnown RBP10.27□□□□□ -0.76
BDNF-204ENST00000395980 ZNF165P49910 485 aa10.27□□□□□ -0.76
BDNF-204ENST00000395980 GABPB1Q06547 395 aaPredicted RBP10.27□□□□□ -0.76
BDNF-204ENST00000395980 CAMK4Q16566 473 aa10.27□□□□□ -0.76
BDNF-204ENST00000395980 AACSQ86V21 672 aa10.27□□□□□ -0.76
BDNF-204ENST00000395980 DBF4Q9UBU7 674 aaPredicted RBP10.27□□□□□ -0.76
BDNF-204ENST00000395980 UTYO14607 1347 aa10.27□□□□□ -0.77
BDNF-204ENST00000395980 RFX7Q2KHR2 1363 aa10.27□□□□□ -0.77
BDNF-204ENST00000395980 CTAGE5O15320 804 aa10.27□□□□□ -0.77
BDNF-204ENST00000395980 FERMT3Q86UX7 667 aa10.27□□□□□ -0.77
BDNF-204ENST00000395980 MRFAP1L1Q96HT8 127 aa10.27□□□□□ -0.77
BDNF-204ENST00000395980 ZSCAN16Q9H4T2 348 aaPredicted RBP10.27□□□□□ -0.77
BDNF-204ENST00000395980 U2AF2P26368 475 aaKnown RBP eCLIP10.27□□□□□ -0.77
BDNF-204ENST00000395980 TOB2Q14106 344 aaPredicted RBP10.27□□□□□ -0.77
BDNF-204ENST00000395980 CKAP2LQ8IYA6 745 aa10.27□□□□□ -0.77
BDNF-204ENST00000395980 CCDC112Q8NEF3 446 aa10.27□□□□□ -0.77
BDNF-204ENST00000395980 CTNNA3Q9UI47 895 aa10.27□□□□□ -0.77
BDNF-204ENST00000395980 TBX22Q9Y458 520 aa10.27□□□□□ -0.77
BDNF-204ENST00000395980 RBM6P78332 1123 aaKnown RBP10.26□□□□□ -0.77
BDNF-204ENST00000395980 C9orf78Q9NZ63 289 aaPredicted RBP10.26□□□□□ -0.77
BDNF-204ENST00000395980 LTKP29376 864 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 USPL1Q5W0Q7 1092 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 LARP1Q6PKG0 1096 aaKnown RBP10.26□□□□□ -0.77
BDNF-204ENST00000395980 KSR2Q6VAB6 950 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 FAM227BQ96M60 508 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 CLIP2Q9UDT6 1046 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 ARHGAP23Q9P227 1491 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 LRMPQ12912 555 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 RESTQ13127 1097 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 C16orf45Q96MC5 204 aaPredicted RBP10.26□□□□□ -0.77
BDNF-204ENST00000395980 KCND1Q9NSA2 647 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 CFAP45Q9UL16 551 aa10.26□□□□□ -0.77
BDNF-204ENST00000395980 TAF3Q5VWG9 929 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 BICD2Q8TD16 824 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 GTF3C6Q969F1 213 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 PGBD1Q96JS3 809 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 AMOTL2Q9Y2J4 779 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 LTN1O94822 1766 aa10.25□□□□□ -0.77
BDNF-204ENST00000395980 PHRF1Q9P1Y6 1649 aaKnown RBP10.25□□□□□ -0.77
BDNF-204ENST00000395980 FAM173BQ6P4H8 233 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms