RNA–Protein interactions for RNA: ENST00000395549.3

ATG13-202, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-202ENST00000395549 ZC3H4Q9UPT8 1303 aaKnown RBP21.29■■□□□ 1
ATG13-202ENST00000395549 TCIRG1Q13488 830 aa21.28■■□□□ 1
ATG13-202ENST00000395549 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
ATG13-202ENST00000395549 UTP14AQ9BVJ6 771 aaKnown RBP21.28■■□□□ 1
ATG13-202ENST00000395549 TAOK3Q9H2K8 898 aa21.28■■□□□ 1
ATG13-202ENST00000395549 KDM2BQ8NHM5 1336 aa21.28■■□□□ 1
ATG13-202ENST00000395549 LTBP3Q9NS15 1303 aa21.28■■□□□ 1
ATG13-202ENST00000395549 ALDH1B1P30837 517 aa21.27■■□□□ 1
ATG13-202ENST00000395549 CCDC93Q567U6 631 aa21.27■■□□□ 1
ATG13-202ENST00000395549 NLRP10Q86W26 655 aa21.27■■□□□ 1
ATG13-202ENST00000395549 PLBD2Q8NHP8 589 aa21.27■■□□□ 1
ATG13-202ENST00000395549 C7orf43Q8WVR3 580 aa21.27■■□□□ 1
ATG13-202ENST00000395549 RPGRQ92834 1020 aaKnown RBP21.27■■□□□ 1
ATG13-202ENST00000395549 TSR2Q969E8 191 aaKnown RBP21.27■■□□□ 1
ATG13-202ENST00000395549 DDX60Q8IY21 1712 aaKnown RBP21.26■□□□□ 0.99
ATG13-202ENST00000395549 RNF123Q5XPI4 1314 aa21.26■□□□□ 0.99
ATG13-202ENST00000395549 ANKRD13DQ6ZTN6 518 aa21.25■□□□□ 0.99
ATG13-202ENST00000395549 C3orf67Q6ZVT6 689 aa21.25■□□□□ 0.99
ATG13-202ENST00000395549 FAM9BQ8IZU0 186 aa21.25■□□□□ 0.99
ATG13-202ENST00000395549 SALL2Q9Y467 1007 aaPredicted RBP21.25■□□□□ 0.99
ATG13-202ENST00000395549 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
ATG13-202ENST00000395549 OLFM4Q6UX06 510 aa21.24■□□□□ 0.99
ATG13-202ENST00000395549 TSPYL6Q8N831 410 aa21.24■□□□□ 0.99
ATG13-202ENST00000395549 ZNF428Q96B54 188 aa21.23■□□□□ 0.99
ATG13-202ENST00000395549 NLRP3Q96P20 1036 aa21.23■□□□□ 0.99
ATG13-202ENST00000395549 PHAXQ9H814 394 aaKnown RBP21.23■□□□□ 0.99
ATG13-202ENST00000395549 TRMT112Q9UI30 125 aaKnown RBP21.23■□□□□ 0.99
ATG13-202ENST00000395549 IL16Q14005 1332 aa21.23■□□□□ 0.99
ATG13-202ENST00000395549 TAF1P21675 1872 aa21.22■□□□□ 0.99
ATG13-202ENST00000395549 HOXA10P31260 410 aaPredicted RBP21.22■□□□□ 0.99
ATG13-202ENST00000395549 GOLGA2Q08379 1002 aa21.22■□□□□ 0.99
ATG13-202ENST00000395549 SLC10A5Q5PT55 438 aa21.22■□□□□ 0.99
ATG13-202ENST00000395549 CCDC30Q5VVM6 783 aa21.22■□□□□ 0.99
ATG13-202ENST00000395549 RBM17Q96I25 401 aaKnown RBP21.22■□□□□ 0.99
ATG13-202ENST00000395549 GLTPD2A6NH11 291 aa21.21■□□□□ 0.99
ATG13-202ENST00000395549 ATP5J2-PTCD1G3V325 749 aa21.21■□□□□ 0.99
ATG13-202ENST00000395549 FKBP4Q02790 459 aaKnown RBP eCLIP21.21■□□□□ 0.99
ATG13-202ENST00000395549 SYNE4Q8N205 404 aa21.21■□□□□ 0.99
ATG13-202ENST00000395549 ISCA1Q9BUE6 129 aa21.21■□□□□ 0.99
ATG13-202ENST00000395549 RRAGCQ9HB90 399 aa21.21■□□□□ 0.99
ATG13-202ENST00000395549 SH3TC1Q8TE82 1336 aa21.21■□□□□ 0.99
ATG13-202ENST00000395549 CACNA1FO60840 1977 aa21.21■□□□□ 0.99
ATG13-202ENST00000395549 HCLS1P14317 486 aaPredicted RBP21.2■□□□□ 0.98
ATG13-202ENST00000395549 RIC3Q7Z5B4 369 aa21.2■□□□□ 0.98
ATG13-202ENST00000395549 C16orf71Q8IYS4 520 aaPredicted RBP21.2■□□□□ 0.98
ATG13-202ENST00000395549 RTKN2Q8IZC4 609 aa21.2■□□□□ 0.98
ATG13-202ENST00000395549 CRAMP1Q96RY5 1269 aa21.2■□□□□ 0.98
ATG13-202ENST00000395549 CHMP4AQ9BY43 222 aa21.2■□□□□ 0.98
ATG13-202ENST00000395549 WDR90Q96KV7 1748 aa21.2■□□□□ 0.98
ATG13-202ENST00000395549 TOMM70O94826 608 aa21.19■□□□□ 0.98
ATG13-202ENST00000395549 SNED1Q8TER0 1413 aa21.19■□□□□ 0.98
ATG13-202ENST00000395549 PPEF1O14829 653 aaPredicted RBP21.18■□□□□ 0.98
ATG13-202ENST00000395549 TWISTNBQ3B726 338 aaPredicted RBP21.18■□□□□ 0.98
ATG13-202ENST00000395549 WDR63Q8IWG1 891 aa21.18■□□□□ 0.98
ATG13-202ENST00000395549 ZNF277Q9NRM2 450 aaPredicted RBP21.18■□□□□ 0.98
ATG13-202ENST00000395549 FANCIQ9NVI1 1328 aa21.18■□□□□ 0.98
ATG13-202ENST00000395549 TCERG1O14776 1098 aaKnown RBP21.17■□□□□ 0.98
ATG13-202ENST00000395549 SLC51AQ86UW1 340 aa21.17■□□□□ 0.98
ATG13-202ENST00000395549 ABCC4O15439 1325 aa21.17■□□□□ 0.98
ATG13-202ENST00000395549 CC2D2BQ6DHV5 1058 aa21.16■□□□□ 0.98
ATG13-202ENST00000395549 DPY19L2Q6NUT2 758 aa21.16■□□□□ 0.98
ATG13-202ENST00000395549 FAM89AQ96GI7 184 aa21.16■□□□□ 0.98
ATG13-202ENST00000395549 MYD88Q99836 296 aa21.16■□□□□ 0.98
ATG13-202ENST00000395549 STK31Q9BXU1 1019 aa21.16■□□□□ 0.98
ATG13-202ENST00000395549 DDX58O95786 925 aaKnown RBP21.15■□□□□ 0.98
ATG13-202ENST00000395549 TRIM28Q13263 835 aaKnown RBP21.15■□□□□ 0.98
ATG13-202ENST00000395549 HSPA6P17066 643 aa21.14■□□□□ 0.97
ATG13-202ENST00000395549 IARSP41252 1262 aaKnown RBP21.14■□□□□ 0.97
ATG13-202ENST00000395549 RTL5Q5HYW3 569 aaPredicted RBP21.14■□□□□ 0.97
ATG13-202ENST00000395549 RBM46Q8TBY0 533 aaKnown RBP21.14■□□□□ 0.97
ATG13-202ENST00000395549 PSMD1Q99460 953 aa21.14■□□□□ 0.97
ATG13-202ENST00000395549 VEGFAP15692 232 aaPredicted RBP21.13■□□□□ 0.97
ATG13-202ENST00000395549 DDX46Q7L014 1031 aaKnown RBP21.13■□□□□ 0.97
ATG13-202ENST00000395549 LRRC37AA6NMS7 1700 aa21.12■□□□□ 0.97
ATG13-202ENST00000395549 GRIPAP1Q4V328 841 aa21.12■□□□□ 0.97
ATG13-202ENST00000395549 TMX4Q9H1E5 349 aaPredicted RBP21.12■□□□□ 0.97
ATG13-202ENST00000395549 ATP6V0A2Q9Y487 856 aa21.12■□□□□ 0.97
ATG13-202ENST00000395549 SCN4AP35499 1836 aa21.11■□□□□ 0.97
ATG13-202ENST00000395549 DDNO94850 711 aaPredicted RBP21.11■□□□□ 0.97
ATG13-202ENST00000395549 GRAPQ13588 217 aa21.11■□□□□ 0.97
ATG13-202ENST00000395549 GRAPLQ8TC17 118 aaPredicted RBP21.11■□□□□ 0.97
ATG13-202ENST00000395549 METTL22Q9BUU2 404 aaPredicted RBP21.11■□□□□ 0.97
ATG13-202ENST00000395549 SPINK5Q9NQ38 1064 aaPredicted RBP21.11■□□□□ 0.97
ATG13-202ENST00000395549 MAP3K2Q9Y2U5 619 aa21.11■□□□□ 0.97
ATG13-202ENST00000395549 MYH3P11055 1940 aa21.11■□□□□ 0.97
ATG13-202ENST00000395549 COL4A5P29400 1685 aa21.11■□□□□ 0.97
ATG13-202ENST00000395549 ZNF541Q9H0D2 1346 aa21.1■□□□□ 0.97
ATG13-202ENST00000395549 CEP350Q5VT06 3117 aa21.1■□□□□ 0.97
ATG13-202ENST00000395549 POTECB2RU33 542 aa21.1■□□□□ 0.97
ATG13-202ENST00000395549 IRS4O14654 1257 aaPredicted RBP21.1■□□□□ 0.97
ATG13-202ENST00000395549 SLC4A2P04920 1241 aa21.1■□□□□ 0.97
ATG13-202ENST00000395549 EXOSC9Q06265 439 aaKnown RBP21.1■□□□□ 0.97
ATG13-202ENST00000395549 G2E3Q7L622 706 aa21.1■□□□□ 0.97
ATG13-202ENST00000395549 CCDC191Q8NCU4 936 aa21.1■□□□□ 0.97
ATG13-202ENST00000395549 COL4A1P02462 1669 aa21.09■□□□□ 0.97
ATG13-202ENST00000395549 PI4KAP2A4QPH2 592 aa21.09■□□□□ 0.97
ATG13-202ENST00000395549 BBOX1O75936 387 aa21.09■□□□□ 0.97
ATG13-202ENST00000395549 KSR2Q6VAB6 950 aa21.09■□□□□ 0.97
ATG13-202ENST00000395549 PI4KAP1Q8N8J0 262 aa21.09■□□□□ 0.97
ATG13-202ENST00000395549 ZBTB38Q8NAP3 1195 aaPredicted RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms