RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 SKIP12755 728 aa8.98□□□□□ -0.97
AP3S1-202ENST00000395548 EML3Q32P44 896 aa8.98□□□□□ -0.97
AP3S1-202ENST00000395548 RNFT1Q5M7Z0 435 aa8.98□□□□□ -0.97
AP3S1-202ENST00000395548 ZNF837Q96EG3 531 aaPredicted RBP8.98□□□□□ -0.97
AP3S1-202ENST00000395548 FHDC1Q9C0D6 1143 aaPredicted RBP8.98□□□□□ -0.97
AP3S1-202ENST00000395548 ETNK1Q9HBU6 452 aa8.98□□□□□ -0.97
AP3S1-202ENST00000395548 ZC3H13Q5T200 1668 aaKnown RBP8.97□□□□□ -0.97
AP3S1-202ENST00000395548 GDF10P55107 478 aa8.97□□□□□ -0.97
AP3S1-202ENST00000395548 DBN1Q16643 649 aa8.97□□□□□ -0.97
AP3S1-202ENST00000395548 DEFB132Q7Z7B7 95 aa8.97□□□□□ -0.97
AP3S1-202ENST00000395548 EID1Q9Y6B2 187 aa8.97□□□□□ -0.97
AP3S1-202ENST00000395548 MAP3K1Q13233 1512 aa8.96□□□□□ -0.97
AP3S1-202ENST00000395548 A0A1B0GTH6 734 aa8.96□□□□□ -0.98
AP3S1-202ENST00000395548 PIK3CDO00329 1044 aa8.96□□□□□ -0.98
AP3S1-202ENST00000395548 INHAP05111 366 aa8.96□□□□□ -0.98
AP3S1-202ENST00000395548 TLR1Q15399 786 aa8.96□□□□□ -0.98
AP3S1-202ENST00000395548 TXNDC2Q86VQ3 553 aa8.96□□□□□ -0.98
AP3S1-202ENST00000395548 TRERF1Q96PN7 1200 aa8.96□□□□□ -0.98
AP3S1-202ENST00000395548 SLURP2P0DP57 97 aa8.95□□□□□ -0.98
AP3S1-202ENST00000395548 PHKA2P46019 1235 aa8.95□□□□□ -0.98
AP3S1-202ENST00000395548 SCNN1DP51172 638 aa8.95□□□□□ -0.98
AP3S1-202ENST00000395548 PPARGC1BQ86YN6 1023 aaKnown RBP8.95□□□□□ -0.98
AP3S1-202ENST00000395548 RHBDD1Q8TEB9 315 aa8.95□□□□□ -0.98
AP3S1-202ENST00000395548 NOD1Q9Y239 953 aa8.95□□□□□ -0.98
AP3S1-202ENST00000395548 PRDM15P57071 1507 aaPredicted RBP8.95□□□□□ -0.98
AP3S1-202ENST00000395548 PLXNC1O60486 1568 aa8.95□□□□□ -0.98
AP3S1-202ENST00000395548 AHDC1Q5TGY3 1603 aaPredicted RBP8.94□□□□□ -0.98
AP3S1-202ENST00000395548 SRSF11Q05519 484 aaKnown RBP8.94□□□□□ -0.98
AP3S1-202ENST00000395548 C4orf17Q53FE4 359 aa8.94□□□□□ -0.98
AP3S1-202ENST00000395548 GTPBP3Q969Y2 492 aaKnown RBP8.94□□□□□ -0.98
AP3S1-202ENST00000395548 NUCKS1Q9H1E3 243 aaKnown RBP8.94□□□□□ -0.98
AP3S1-202ENST00000395548 USP21Q9UK80 565 aa8.94□□□□□ -0.98
AP3S1-202ENST00000395548 CLIP1P30622 1438 aa8.94□□□□□ -0.98
AP3S1-202ENST00000395548 BCL9LQ86UU0 1499 aa8.94□□□□□ -0.98
AP3S1-202ENST00000395548 STAU1O95793 577 aaKnown RBP8.93□□□□□ -0.98
AP3S1-202ENST00000395548 LRRC59Q96AG4 307 aaKnown RBP8.93□□□□□ -0.98
AP3S1-202ENST00000395548 WASHC2CQ9Y4E1 1318 aa8.93□□□□□ -0.98
AP3S1-202ENST00000395548 TIAM1Q13009 1591 aa8.93□□□□□ -0.98
AP3S1-202ENST00000395548 SAMD9LQ8IVG5 1584 aa8.93□□□□□ -0.98
AP3S1-202ENST00000395548 NKTRP30414 1462 aaKnown RBP8.92□□□□□ -0.98
AP3S1-202ENST00000395548 POM121CA8CG34 1229 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 ADAMTS2O95450 1211 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 CSB-PGBD3P0DP91 1061 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 LTKP29376 864 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 BAG6P46379 1132 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 SMTNP53814 917 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 HDGFL1Q5TGJ6 251 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 PGBD3Q8N328 593 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 SVOPQ8N4V2 548 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 GPAMQ9HCL2 828 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 MBIPQ9NS73 344 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 PCDHGA11Q9Y5H2 935 aa8.92□□□□□ -0.98
AP3S1-202ENST00000395548 GPR25O00155 361 aa8.91□□□□□ -0.98
AP3S1-202ENST00000395548 SUPT5HO00267 1087 aaKnown RBP8.91□□□□□ -0.98
AP3S1-202ENST00000395548 NCOA4Q13772 614 aa8.91□□□□□ -0.98
AP3S1-202ENST00000395548 GAS6Q14393 721 aa8.91□□□□□ -0.98
AP3S1-202ENST00000395548 LBRQ14739 615 aaKnown RBP8.91□□□□□ -0.98
AP3S1-202ENST00000395548 SLC4A9Q96Q91 983 aa8.91□□□□□ -0.98
AP3S1-202ENST00000395548 NIFKQ9BYG3 293 aaKnown RBP8.91□□□□□ -0.98
AP3S1-202ENST00000395548 USP17L5A8MUK1 530 aa8.9□□□□□ -0.98
AP3S1-202ENST00000395548 BACH1O14867 736 aa8.9□□□□□ -0.98
AP3S1-202ENST00000395548 GTF2IP78347 998 aa8.9□□□□□ -0.98
AP3S1-202ENST00000395548 PSME1Q06323 249 aa8.9□□□□□ -0.98
AP3S1-202ENST00000395548 ZNF385CQ66K41 422 aaPredicted RBP8.9□□□□□ -0.98
AP3S1-202ENST00000395548 TRIM50Q86XT4 487 aa8.9□□□□□ -0.98
AP3S1-202ENST00000395548 PPP1R1BQ9UD71 204 aaPredicted RBP8.9□□□□□ -0.98
AP3S1-202ENST00000395548 SERTAD1Q9UHV2 236 aa8.9□□□□□ -0.98
AP3S1-202ENST00000395548 NSFL1CQ9UNZ2 370 aaKnown RBP8.9□□□□□ -0.98
AP3S1-202ENST00000395548 PRXQ9BXM0 1461 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 TROQ12816 1431 aaPredicted RBP8.89□□□□□ -0.99
AP3S1-202ENST00000395548 SETD5Q9C0A6 1442 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 TMEM229AB2RXF0 380 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 ATF3P18847 181 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 MSX1P28360 303 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 R3HDM1Q15032 1099 aaKnown RBP8.89□□□□□ -0.99
AP3S1-202ENST00000395548 EFHC2Q5JST6 749 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 ADAMTS19Q8TE59 1207 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 CLUAP1Q96AJ1 413 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 CFHR5Q9BXR6 569 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 PHF24Q9UPV7 400 aa8.89□□□□□ -0.99
AP3S1-202ENST00000395548 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 DIP2AQ14689 1571 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 A6NJY4 79 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 CDK2AP1O14519 115 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 MAP3K10Q02779 954 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 TBC1D9Q6ZT07 1266 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 C14orf37Q86TY3 774 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 PLEKHM2Q8IWE5 1019 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 DEPDC4Q8N2C3 294 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 FNBP4Q8N3X1 1017 aaPredicted RBP8.88□□□□□ -0.99
AP3S1-202ENST00000395548 ADAMTS8Q9UP79 889 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 ATRNO75882 1429 aa8.88□□□□□ -0.99
AP3S1-202ENST00000395548 NINLQ9Y2I6 1382 aa8.87□□□□□ -0.99
AP3S1-202ENST00000395548 SLIT1O75093 1534 aa8.87□□□□□ -0.99
AP3S1-202ENST00000395548 MX2P20592 715 aa8.87□□□□□ -0.99
AP3S1-202ENST00000395548 PLA2G4AP47712 749 aa8.87□□□□□ -0.99
AP3S1-202ENST00000395548 MTFR1Q15390 333 aa8.87□□□□□ -0.99
AP3S1-202ENST00000395548 C1orf216Q8TAB5 229 aa8.87□□□□□ -0.99
AP3S1-202ENST00000395548 WHAMMQ8TF30 809 aa8.87□□□□□ -0.99
AP3S1-202ENST00000395548 CDC42BPBQ9Y5S2 1711 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms