RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 DLEC1Q9Y238 1755 aa12.54□□□□□ -0.4
HIF1A-203ENST00000394997 NECTIN1Q15223 517 aa12.54□□□□□ -0.4
HIF1A-203ENST00000394997 METTL22Q9BUU2 404 aaPredicted RBP12.54□□□□□ -0.4
HIF1A-203ENST00000394997 PANK2Q9BZ23 570 aa12.54□□□□□ -0.4
HIF1A-203ENST00000394997 SNX14Q9Y5W7 946 aa12.54□□□□□ -0.4
HIF1A-203ENST00000394997 BCL9LQ86UU0 1499 aa12.54□□□□□ -0.4
HIF1A-203ENST00000394997 GRM8O00222 908 aa12.54□□□□□ -0.4
HIF1A-203ENST00000394997 SRGAP3O43295 1099 aa12.54□□□□□ -0.4
HIF1A-203ENST00000394997 BRD1O95696 1058 aa12.54□□□□□ -0.4
HIF1A-203ENST00000394997 EIF2S2P20042 333 aaKnown RBP12.54□□□□□ -0.4
HIF1A-203ENST00000394997 PTPN12Q05209 780 aaKnown RBP12.54□□□□□ -0.4
HIF1A-203ENST00000394997 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
HIF1A-203ENST00000394997 ZNF609O15014 1411 aa12.53□□□□□ -0.4
HIF1A-203ENST00000394997 RBM10P98175 930 aaKnown RBP12.53□□□□□ -0.4
HIF1A-203ENST00000394997 PTH1RQ03431 593 aa12.53□□□□□ -0.4
HIF1A-203ENST00000394997 KIF1BPQ96EK5 621 aa12.53□□□□□ -0.4
HIF1A-203ENST00000394997 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
HIF1A-203ENST00000394997 PODXL2Q9NZ53 605 aa12.53□□□□□ -0.4
HIF1A-203ENST00000394997 TMX3Q96JJ7 454 aa12.53□□□□□ -0.4
HIF1A-203ENST00000394997 RRAGDQ9NQL2 400 aaPredicted RBP12.53□□□□□ -0.4
HIF1A-203ENST00000394997 ZNF335Q9H4Z2 1342 aaPredicted RBP12.53□□□□□ -0.4
HIF1A-203ENST00000394997 LY75O60449 1722 aa12.52□□□□□ -0.4
HIF1A-203ENST00000394997 APBB1O00213 710 aa12.52□□□□□ -0.4
HIF1A-203ENST00000394997 HSPA2P54652 639 aa12.52□□□□□ -0.4
HIF1A-203ENST00000394997 RIC1Q4ADV7 1423 aa12.52□□□□□ -0.41
HIF1A-203ENST00000394997 CHRNA2Q15822 529 aa12.52□□□□□ -0.41
HIF1A-203ENST00000394997 ERBB4Q15303 1308 aa12.52□□□□□ -0.41
HIF1A-203ENST00000394997 LARGE1O95461 756 aa12.52□□□□□ -0.41
HIF1A-203ENST00000394997 ATG9AQ7Z3C6 839 aa12.52□□□□□ -0.41
HIF1A-203ENST00000394997 FOXP2O15409 715 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 COPRSQ9NQ92 184 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 RFX7Q2KHR2 1363 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 CHGBP05060 677 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 RUFY3Q7L099 469 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 SLC4A9Q96Q91 983 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 TAF1P21675 1872 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 THSD7AQ9UPZ6 1657 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 PALLDQ8WX93 1383 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 USPL1Q5W0Q7 1092 aa12.51□□□□□ -0.41
HIF1A-203ENST00000394997 BCL9O00512 1426 aa12.5□□□□□ -0.41
HIF1A-203ENST00000394997 H7C1W4 665 aa12.5□□□□□ -0.41
HIF1A-203ENST00000394997 ADCK5Q3MIX3 580 aa12.5□□□□□ -0.41
HIF1A-203ENST00000394997 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
HIF1A-203ENST00000394997 INTS4Q96HW7 963 aaKnown RBP12.5□□□□□ -0.41
HIF1A-203ENST00000394997 TEFQ10587 303 aa12.5□□□□□ -0.41
HIF1A-203ENST00000394997 KLHDC4Q8TBB5 520 aa12.5□□□□□ -0.41
HIF1A-203ENST00000394997 XAGE3Q8WTP9 111 aa12.49□□□□□ -0.41
HIF1A-203ENST00000394997 SURF6O75683 361 aaKnown RBP12.49□□□□□ -0.41
HIF1A-203ENST00000394997 REC8O95072 547 aa12.49□□□□□ -0.41
HIF1A-203ENST00000394997 TSGA10IPQ3SY00 556 aa12.48□□□□□ -0.41
HIF1A-203ENST00000394997 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
HIF1A-203ENST00000394997 LMOD2Q6P5Q4 547 aa12.48□□□□□ -0.41
HIF1A-203ENST00000394997 MAP4K4O95819 1239 aaPredicted RBP12.48□□□□□ -0.41
HIF1A-203ENST00000394997 ZNF445P59923 1031 aa12.48□□□□□ -0.41
HIF1A-203ENST00000394997 PLCB2Q00722 1185 aa12.48□□□□□ -0.41
HIF1A-203ENST00000394997 KLHL40Q2TBA0 621 aa12.48□□□□□ -0.41
HIF1A-203ENST00000394997 COPS6Q7L5N1 327 aa12.48□□□□□ -0.41
HIF1A-203ENST00000394997 MAP4K1Q92918 833 aa12.48□□□□□ -0.41
HIF1A-203ENST00000394997 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
HIF1A-203ENST00000394997 PIP4K2AP48426 406 aaPredicted RBP12.48□□□□□ -0.41
HIF1A-203ENST00000394997 CARD10Q9BWT7 1032 aa12.48□□□□□ -0.41
HIF1A-203ENST00000394997 DBNLQ9UJU6 430 aaKnown RBP12.48□□□□□ -0.41
HIF1A-203ENST00000394997 TMEM87AQ8NBN3 555 aa12.47□□□□□ -0.41
HIF1A-203ENST00000394997 DDX11L8A8MPP1 907 aa12.47□□□□□ -0.41
HIF1A-203ENST00000394997 RRP9O43818 475 aaKnown RBP12.47□□□□□ -0.41
HIF1A-203ENST00000394997 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
HIF1A-203ENST00000394997 A0A0D9SFI3 127 aa12.46□□□□□ -0.41
HIF1A-203ENST00000394997 ZNF589Q86UQ0 364 aaPredicted RBP12.46□□□□□ -0.41
HIF1A-203ENST00000394997 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.41
HIF1A-203ENST00000394997 ESPNB1AK53 854 aa12.46□□□□□ -0.41
HIF1A-203ENST00000394997 GBP4Q96PP9 640 aa12.46□□□□□ -0.41
HIF1A-203ENST00000394997 CACNA1SQ13698 1873 aa12.46□□□□□ -0.41
HIF1A-203ENST00000394997 ZNF646O15015 1829 aaPredicted RBP12.46□□□□□ -0.41
HIF1A-203ENST00000394997 ERVV-2B6SEH9 535 aa12.46□□□□□ -0.42
HIF1A-203ENST00000394997 SNRPA1P09661 255 aaKnown RBP12.46□□□□□ -0.42
HIF1A-203ENST00000394997 PCDH11XQ9BZA7 1347 aa12.46□□□□□ -0.42
HIF1A-203ENST00000394997 PCDH11YQ9BZA8 1340 aa12.46□□□□□ -0.42
HIF1A-203ENST00000394997 FAM227BQ96M60 508 aa12.45□□□□□ -0.42
HIF1A-203ENST00000394997 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
HIF1A-203ENST00000394997 CDK5RAP2Q96SN8 1893 aa12.45□□□□□ -0.42
HIF1A-203ENST00000394997 ISCA1Q9BUE6 129 aa12.45□□□□□ -0.42
HIF1A-203ENST00000394997 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
HIF1A-203ENST00000394997 ATF3P18847 181 aa12.45□□□□□ -0.42
HIF1A-203ENST00000394997 MRE11P49959 708 aa12.45□□□□□ -0.42
HIF1A-203ENST00000394997 TTLL7Q6ZT98 887 aa12.45□□□□□ -0.42
HIF1A-203ENST00000394997 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.45□□□□□ -0.42
HIF1A-203ENST00000394997 SLAIN2Q9P270 581 aa12.45□□□□□ -0.42
HIF1A-203ENST00000394997 TATP17735 454 aaPredicted RBP12.44□□□□□ -0.42
HIF1A-203ENST00000394997 PLBD2Q8NHP8 589 aa12.44□□□□□ -0.42
HIF1A-203ENST00000394997 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
HIF1A-203ENST00000394997 TM6SF1Q9BZW5 370 aa12.44□□□□□ -0.42
HIF1A-203ENST00000394997 R3HCC1Q9Y3T6 440 aaKnown RBP12.44□□□□□ -0.42
HIF1A-203ENST00000394997 LARP1Q6PKG0 1096 aaKnown RBP12.44□□□□□ -0.42
HIF1A-203ENST00000394997 TMEM63CQ9P1W3 806 aa12.44□□□□□ -0.42
HIF1A-203ENST00000394997 TOB2Q14106 344 aaPredicted RBP12.43□□□□□ -0.42
HIF1A-203ENST00000394997 GLRX3O76003 335 aaKnown RBP12.43□□□□□ -0.42
HIF1A-203ENST00000394997 AK2P54819 239 aa12.43□□□□□ -0.42
HIF1A-203ENST00000394997 LAMB1P07942 1786 aa12.43□□□□□ -0.42
HIF1A-203ENST00000394997 ANKRD13DQ6ZTN6 518 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms