RNA–Protein interactions for RNA: ENST00000394241.3

TGFA-202, Transcript of transforming growth factor alpha, humanhuman

TSL 3

Gene TGFA, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-202ENST00000394241 ZNF330Q9Y3S2 320 aaPredicted RBP20.81■□□□□ 0.92
TGFA-202ENST00000394241 SCN7AQ01118 1682 aa20.8■□□□□ 0.92
TGFA-202ENST00000394241 ELL2O00472 640 aaPredicted RBP20.8■□□□□ 0.92
TGFA-202ENST00000394241 PIP4K2AP48426 406 aaPredicted RBP20.8■□□□□ 0.92
TGFA-202ENST00000394241 EIF5P55010 431 aaKnown RBP20.8■□□□□ 0.92
TGFA-202ENST00000394241 SLFN5Q08AF3 891 aa20.8■□□□□ 0.92
TGFA-202ENST00000394241 TWISTNBQ3B726 338 aaPredicted RBP20.8■□□□□ 0.92
TGFA-202ENST00000394241 CHMP4AQ9BY43 222 aa20.8■□□□□ 0.92
TGFA-202ENST00000394241 ARFGEF2Q9Y6D5 1785 aa20.8■□□□□ 0.92
TGFA-202ENST00000394241 A0A087WZG4 1122 aa20.79■□□□□ 0.92
TGFA-202ENST00000394241 NBPF26B4DH59 902 aa20.79■□□□□ 0.92
TGFA-202ENST00000394241 EXOSC9Q06265 439 aaKnown RBP20.79■□□□□ 0.92
TGFA-202ENST00000394241 TBC1D9BQ66K14 1250 aa20.79■□□□□ 0.92
TGFA-202ENST00000394241 PRR5LQ6MZQ0 368 aa20.79■□□□□ 0.92
TGFA-202ENST00000394241 NBPF10Q6P3W6 841 aaKnown RBP20.79■□□□□ 0.92
TGFA-202ENST00000394241 CCDC24Q8N4L8 307 aa20.79■□□□□ 0.92
TGFA-202ENST00000394241 NBPF15Q8N660 670 aa20.79■□□□□ 0.92
TGFA-202ENST00000394241 NECTIN2Q92692 538 aa20.79■□□□□ 0.92
TGFA-202ENST00000394241 CDCA7LQ96GN5 454 aa20.79■□□□□ 0.92
TGFA-202ENST00000394241 BCORQ6W2J9 1755 aa20.78■□□□□ 0.92
TGFA-202ENST00000394241 EAPPQ56P03 285 aaPredicted RBP20.78■□□□□ 0.92
TGFA-202ENST00000394241 SOGA3Q5TF21 947 aa20.78■□□□□ 0.92
TGFA-202ENST00000394241 TSPYL6Q8N831 410 aa20.78■□□□□ 0.92
TGFA-202ENST00000394241 CNKSR1Q969H4 720 aa20.78■□□□□ 0.92
TGFA-202ENST00000394241 RASSF10A6NK89 507 aa20.77■□□□□ 0.92
TGFA-202ENST00000394241 MYL6BP14649 208 aa20.77■□□□□ 0.92
TGFA-202ENST00000394241 MAP2K1Q02750 393 aaPredicted RBP20.77■□□□□ 0.92
TGFA-202ENST00000394241 MLLT1Q03111 559 aaPredicted RBP20.77■□□□□ 0.92
TGFA-202ENST00000394241 DEFB115Q30KQ5 88 aa20.77■□□□□ 0.92
TGFA-202ENST00000394241 ADAMTSL1Q8N6G6 1762 aa20.77■□□□□ 0.91
TGFA-202ENST00000394241 PRPF40BQ6NWY9 871 aaKnown RBP20.76■□□□□ 0.91
TGFA-202ENST00000394241 CHPF2Q9P2E5 772 aa20.76■□□□□ 0.91
TGFA-202ENST00000394241 CCDC30Q5VVM6 783 aa20.75■□□□□ 0.91
TGFA-202ENST00000394241 STYK1Q6J9G0 422 aa20.75■□□□□ 0.91
TGFA-202ENST00000394241 DDX21Q9NR30 783 aaKnown RBP eCLIP20.75■□□□□ 0.91
TGFA-202ENST00000394241 DBF4Q9UBU7 674 aaPredicted RBP20.75■□□□□ 0.91
TGFA-202ENST00000394241 CLEC11AQ9Y240 323 aa20.75■□□□□ 0.91
TGFA-202ENST00000394241 WDR33Q9C0J8 1336 aaKnown RBP20.75■□□□□ 0.91
TGFA-202ENST00000394241 CCDC85CA6NKD9 419 aa20.74■□□□□ 0.91
TGFA-202ENST00000394241 PDIA6Q15084 440 aa20.74■□□□□ 0.91
TGFA-202ENST00000394241 DZIP3Q86Y13 1208 aaKnown RBP20.74■□□□□ 0.91
TGFA-202ENST00000394241 TRMT2AQ8IZ69 625 aaKnown RBP20.74■□□□□ 0.91
TGFA-202ENST00000394241 HACL1Q9UJ83 578 aa20.74■□□□□ 0.91
TGFA-202ENST00000394241 NPHP1O15259 732 aa20.73■□□□□ 0.91
TGFA-202ENST00000394241 ANXA1P04083 346 aa20.73■□□□□ 0.91
TGFA-202ENST00000394241 SRGNP10124 158 aa20.73■□□□□ 0.91
TGFA-202ENST00000394241 PROSER3Q2NL68 480 aa20.73■□□□□ 0.91
TGFA-202ENST00000394241 CNBD1Q8NA66 436 aa20.73■□□□□ 0.91
TGFA-202ENST00000394241 VAMP4O75379 141 aa20.72■□□□□ 0.91
TGFA-202ENST00000394241 EPHX2P34913 555 aa20.72■□□□□ 0.91
TGFA-202ENST00000394241 RGS19P49795 217 aa20.72■□□□□ 0.91
TGFA-202ENST00000394241 KIF6Q6ZMV9 814 aa20.72■□□□□ 0.91
TGFA-202ENST00000394241 MASTLQ96GX5 879 aa20.72■□□□□ 0.91
TGFA-202ENST00000394241 STK31Q9BXU1 1019 aa20.72■□□□□ 0.91
TGFA-202ENST00000394241 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
TGFA-202ENST00000394241 ZNF541Q9H0D2 1346 aa20.72■□□□□ 0.91
TGFA-202ENST00000394241 ST5P78524 1137 aa20.71■□□□□ 0.91
TGFA-202ENST00000394241 LRP10Q7Z4F1 713 aa20.71■□□□□ 0.91
TGFA-202ENST00000394241 CNTROBQ8N137 903 aa20.71■□□□□ 0.91
TGFA-202ENST00000394241 HYPKQ9NX55 129 aa20.71■□□□□ 0.91
TGFA-202ENST00000394241 CCDC93Q567U6 631 aa20.7■□□□□ 0.9
TGFA-202ENST00000394241 MAP1SQ66K74 1059 aaPredicted RBP20.7■□□□□ 0.9
TGFA-202ENST00000394241 PNMA8AQ86V59 439 aaPredicted RBP20.7■□□□□ 0.9
TGFA-202ENST00000394241 SETDB2Q96T68 719 aa20.7■□□□□ 0.9
TGFA-202ENST00000394241 ABT1Q9ULW3 272 aaKnown RBP20.7■□□□□ 0.9
TGFA-202ENST00000394241 CACNA1FO60840 1977 aa20.69■□□□□ 0.9
TGFA-202ENST00000394241 THSD7BQ9C0I4 1608 aa20.69■□□□□ 0.9
TGFA-202ENST00000394241 CAMTA2O94983 1202 aa20.69■□□□□ 0.9
TGFA-202ENST00000394241 TTLL7Q6ZT98 887 aa20.68■□□□□ 0.9
TGFA-202ENST00000394241 XAGE3Q8WTP9 111 aa20.68■□□□□ 0.9
TGFA-202ENST00000394241 C7orf43Q8WVR3 580 aa20.68■□□□□ 0.9
TGFA-202ENST00000394241 YTHDC1Q96MU7 727 aaKnown RBP20.68■□□□□ 0.9
TGFA-202ENST00000394241 ZNF652Q9Y2D9 606 aa20.68■□□□□ 0.9
TGFA-202ENST00000394241 RNF123Q5XPI4 1314 aa20.68■□□□□ 0.9
TGFA-202ENST00000394241 MAP3K15Q6ZN16 1313 aa20.68■□□□□ 0.9
TGFA-202ENST00000394241 TCERG1O14776 1098 aaKnown RBP20.67■□□□□ 0.9
TGFA-202ENST00000394241 RGL2O15211 777 aa20.67■□□□□ 0.9
TGFA-202ENST00000394241 CT47B1P0C2W7 299 aaPredicted RBP20.67■□□□□ 0.9
TGFA-202ENST00000394241 FKBP4Q02790 459 aaKnown RBP eCLIP20.67■□□□□ 0.9
TGFA-202ENST00000394241 AIMP1Q12904 312 aaKnown RBP20.67■□□□□ 0.9
TGFA-202ENST00000394241 COPS6Q7L5N1 327 aa20.67■□□□□ 0.9
TGFA-202ENST00000394241 BEGAINQ9BUH8 593 aa20.67■□□□□ 0.9
TGFA-202ENST00000394241 ZNF277Q9NRM2 450 aaPredicted RBP20.67■□□□□ 0.9
TGFA-202ENST00000394241 ZNF428Q96B54 188 aa20.66■□□□□ 0.9
TGFA-202ENST00000394241 NUP98P52948 1817 aa20.65■□□□□ 0.9
TGFA-202ENST00000394241 ERVV-1B6SEH8 477 aa20.65■□□□□ 0.9
TGFA-202ENST00000394241 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
TGFA-202ENST00000394241 ZBTB3Q9H5J0 574 aa20.65■□□□□ 0.9
TGFA-202ENST00000394241 SLC4A2P04920 1241 aa20.64■□□□□ 0.89
TGFA-202ENST00000394241 PAXIP1Q6ZW49 1069 aaPredicted RBP20.64■□□□□ 0.89
TGFA-202ENST00000394241 CAPNS2Q96L46 248 aa20.64■□□□□ 0.89
TGFA-202ENST00000394241 PHAXQ9H814 394 aaKnown RBP20.64■□□□□ 0.89
TGFA-202ENST00000394241 ANKRD36CQ5JPF3 1778 aa20.64■□□□□ 0.89
TGFA-202ENST00000394241 NPR1P16066 1061 aa20.63■□□□□ 0.89
TGFA-202ENST00000394241 ECE1P42892 770 aa20.63■□□□□ 0.89
TGFA-202ENST00000394241 FZD9O00144 591 aa20.62■□□□□ 0.89
TGFA-202ENST00000394241 DDX58O95786 925 aaKnown RBP20.62■□□□□ 0.89
TGFA-202ENST00000394241 HLFQ16534 295 aa20.62■□□□□ 0.89
TGFA-202ENST00000394241 RTKN2Q8IZC4 609 aa20.62■□□□□ 0.89
TGFA-202ENST00000394241 GPC2Q8N158 579 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms