RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 GIMAP6Q6P9H5 292 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 EDC3Q96F86 508 aaKnown RBP10.68□□□□□ -0.7
CDH11-202ENST00000394156 PLIN2Q99541 437 aa10.68□□□□□ -0.7
CDH11-202ENST00000394156 CYP7A1P22680 504 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 C8orf76Q96K31 380 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 ODF2Q5BJF6 829 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 AKAP4Q5JQC9 854 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 CCDC39Q9UFE4 941 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 PARD3Q8TEW0 1356 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 IL2RBP14784 551 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 Q6ZUG5 572 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 TFCP2L1Q9NZI6 479 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 SLC4A4Q9Y6R1 1079 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 TSPY2A6NKD2 308 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 CCDC192P0DO97 292 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 AAMPQ13685 434 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 CEP85Q6P2H3 762 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 ECHDC1Q9NTX5 307 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 STX8Q9UNK0 236 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 GNPATO15228 680 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 PER1O15534 1290 aaPredicted RBP10.67□□□□□ -0.7
CDH11-202ENST00000394156 MARCKSP29966 332 aaPredicted RBP10.67□□□□□ -0.7
CDH11-202ENST00000394156 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
CDH11-202ENST00000394156 NLRP5P59047 1200 aa10.67□□□□□ -0.7
CDH11-202ENST00000394156 PDCP20941 246 aa10.66□□□□□ -0.7
CDH11-202ENST00000394156 PDE1AP54750 535 aa10.66□□□□□ -0.7
CDH11-202ENST00000394156 C8orf34Q49A92 452 aa10.66□□□□□ -0.7
CDH11-202ENST00000394156 EVI5LQ96CN4 794 aa10.66□□□□□ -0.7
CDH11-202ENST00000394156 USP16Q9Y5T5 823 aa10.66□□□□□ -0.7
CDH11-202ENST00000394156 SAMD9Q5K651 1589 aa10.66□□□□□ -0.7
CDH11-202ENST00000394156 MCM2P49736 904 aa10.66□□□□□ -0.7
CDH11-202ENST00000394156 SSRP1Q08945 709 aaKnown RBP10.66□□□□□ -0.7
CDH11-202ENST00000394156 APOBRQ0VD83 1088 aa10.66□□□□□ -0.7
CDH11-202ENST00000394156 GPIHBP1Q8IV16 184 aa10.66□□□□□ -0.7
CDH11-202ENST00000394156 SEC63Q9UGP8 760 aaKnown RBP10.66□□□□□ -0.7
CDH11-202ENST00000394156 PNMA6EA0A0J9YXQ4 647 aa10.65□□□□□ -0.7
CDH11-202ENST00000394156 RBM8AQ9Y5S9 174 aaKnown RBP10.65□□□□□ -0.7
CDH11-202ENST00000394156 BRF1Q92994 677 aa10.65□□□□□ -0.7
CDH11-202ENST00000394156 MAP3K5Q99683 1374 aa10.65□□□□□ -0.7
CDH11-202ENST00000394156 TEX14Q8IWB6 1497 aa10.65□□□□□ -0.7
CDH11-202ENST00000394156 SLC9C2Q5TAH2 1124 aa10.65□□□□□ -0.7
CDH11-202ENST00000394156 SPTY2D1Q68D10 685 aaPredicted RBP10.65□□□□□ -0.7
CDH11-202ENST00000394156 CEP57L1Q8IYX8 460 aa10.65□□□□□ -0.7
CDH11-202ENST00000394156 IRS4O14654 1257 aaPredicted RBP10.65□□□□□ -0.7
CDH11-202ENST00000394156 IL13P35225 146 aa10.65□□□□□ -0.7
CDH11-202ENST00000394156 USP25Q9UHP3 1055 aa10.65□□□□□ -0.7
CDH11-202ENST00000394156 CTNNA3Q9UI47 895 aa10.65□□□□□ -0.7
CDH11-202ENST00000394156 TERF1P54274 439 aa10.65□□□□□ -0.71
CDH11-202ENST00000394156 DEF6Q9H4E7 631 aa10.65□□□□□ -0.71
CDH11-202ENST00000394156 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.65□□□□□ -0.712e-6■■■■■ 96.1
CDH11-202ENST00000394156 NSFL1CQ9UNZ2 370 aaKnown RBP10.65□□□□□ -0.71
CDH11-202ENST00000394156 NPHP3Q7Z494 1330 aa10.65□□□□□ -0.71
CDH11-202ENST00000394156 TNNT3P45378 269 aaPredicted RBP10.65□□□□□ -0.71
CDH11-202ENST00000394156 TMX3Q96JJ7 454 aa10.65□□□□□ -0.71
CDH11-202ENST00000394156 NEK1Q96PY6 1258 aa10.65□□□□□ -0.71
CDH11-202ENST00000394156 hCG_1642624A0A1W2PR95 340 aa10.64□□□□□ -0.71
CDH11-202ENST00000394156 AFMP43652 599 aa10.64□□□□□ -0.71
CDH11-202ENST00000394156 VEZTQ9HBM0 779 aa10.64□□□□□ -0.71
CDH11-202ENST00000394156 USP19O94966 1318 aa10.64□□□□□ -0.71
CDH11-202ENST00000394156 ABCC11Q96J66 1382 aa10.64□□□□□ -0.71
CDH11-202ENST00000394156 PRKG1Q13976 671 aa10.64□□□□□ -0.71
CDH11-202ENST00000394156 CFAP100Q494V2 611 aa10.64□□□□□ -0.71
CDH11-202ENST00000394156 TRPM2O94759 1503 aa10.64□□□□□ -0.71
CDH11-202ENST00000394156 KLF18A0A0U1RQI7 1052 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 FAM227BQ96M60 508 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 CENPHQ9H3R5 247 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 MFSD6Q6ZSS7 791 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 ANKRD18AQ8IVF6 992 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 CHAMP1Q96JM3 812 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 NBPF7P0C2Y1 421 aaPredicted RBP10.63□□□□□ -0.71
CDH11-202ENST00000394156 METAP2P50579 478 aaKnown RBP eCLIP10.63□□□□□ -0.71
CDH11-202ENST00000394156 SSR1P43307 286 aaKnown RBP10.63□□□□□ -0.71
CDH11-202ENST00000394156 ST5P78524 1137 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 KSR2Q6VAB6 950 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 FSIP1Q8NA03 581 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 LIMCH1Q9UPQ0 1083 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 CDC42BPAQ5VT25 1732 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 CCDC152Q4G0S7 254 aa10.63□□□□□ -0.71
CDH11-202ENST00000394156 ATP2B3Q16720 1220 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 NOM1Q5C9Z4 860 aaKnown RBP10.62□□□□□ -0.71
CDH11-202ENST00000394156 HEATR3Q7Z4Q2 680 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 C19orf44Q9H6X5 657 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 ZYXQ15942 572 aaKnown RBP10.62□□□□□ -0.71
CDH11-202ENST00000394156 FILIP1LQ4L180 1135 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 CMTR1Q8N1G2 835 aaKnown RBP10.62□□□□□ -0.71
CDH11-202ENST00000394156 PAG1Q9NWQ8 432 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 MBD3O95983 291 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 TBC1D32Q96NH3 1257 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 DNM1Q05193 864 aaKnown RBP10.62□□□□□ -0.71
CDH11-202ENST00000394156 ESYT1Q9BSJ8 1104 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 UTP14AQ9BVJ6 771 aaKnown RBP10.62□□□□□ -0.71
CDH11-202ENST00000394156 NOL7Q9UMY1 257 aaKnown RBP10.62□□□□□ -0.71
CDH11-202ENST00000394156 STX6O43752 255 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 ERCC3P19447 782 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 MAP3K11Q16584 847 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 SPECC1Q5M775 1068 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 COL17A1Q9UMD9 1497 aaPredicted RBP10.62□□□□□ -0.71
CDH11-202ENST00000394156 PLS1Q14651 629 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 PPFIBP1Q86W92 1011 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 MYL10Q9BUA6 226 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms