RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 CALM3P0DP25 149 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 SSR1P43307 286 aaKnown RBP8.3□□□□□ -1.08
DDX60-201ENST00000393743 HOOK3Q86VS8 718 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 NAP1L4Q99733 375 aaKnown RBP8.3□□□□□ -1.08
DDX60-201ENST00000393743 ZBTB3Q9H5J0 574 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 TRPM2O94759 1503 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 ESR2Q92731 530 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 IFI16Q16666 785 aaKnown RBP8.3□□□□□ -1.08
DDX60-201ENST00000393743 CCDC183Q5T5S1 534 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 PLVAPQ9BX97 442 aa8.3□□□□□ -1.08
DDX60-201ENST00000393743 UBA7P41226 1012 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 TMEM67Q5HYA8 995 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 HOOK2Q96ED9 719 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 ZSCAN16Q9H4T2 348 aaPredicted RBP8.29□□□□□ -1.08
DDX60-201ENST00000393743 RPRD2Q5VT52 1461 aaKnown RBP8.29□□□□□ -1.08
DDX60-201ENST00000393743 PAFAH1B1P43034 410 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 NAA15Q9BXJ9 866 aaKnown RBP8.29□□□□□ -1.08
DDX60-201ENST00000393743 KIF5CO60282 957 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 IL2RBP14784 551 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 MCM5P33992 734 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 APBB1IPQ7Z5R6 666 aaPredicted RBP8.29□□□□□ -1.08
DDX60-201ENST00000393743 SH2D4AQ9H788 454 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 ABCC10Q5T3U5 1492 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 GSDMDP57764 484 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 CCDC174Q6PII3 467 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 TBCAO75347 108 aaKnown RBP8.29□□□□□ -1.08
DDX60-201ENST00000393743 STAMBPO95630 424 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 USP8P40818 1118 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 TNNI2P48788 182 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 JDP2Q8WYK2 163 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 DDX11Q96FC9 970 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 UTP14AQ9BVJ6 771 aaKnown RBP8.29□□□□□ -1.08
DDX60-201ENST00000393743 BABAM1Q9NWV8 329 aa8.29□□□□□ -1.08
DDX60-201ENST00000393743 POTEB2H3BUK9 544 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 FMNL3Q8IVF7 1028 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 USHBP1Q8N6Y0 703 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 CNNM3Q8NE01 707 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 SPINK5Q9NQ38 1064 aaPredicted RBP8.28□□□□□ -1.08
DDX60-201ENST00000393743 PARP3Q9Y6F1 533 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 ITSN2Q9NZM3 1697 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 PPIP5K1Q6PFW1 1433 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 RIMS2Q9UQ26 1411 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 ADAMTS12P58397 1594 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 SPDYE4A6NLX3 237 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 GPTP24298 496 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 CEBPAP49715 358 aaPredicted RBP8.28□□□□□ -1.08
DDX60-201ENST00000393743 NCBP1Q09161 790 aaKnown RBP8.28□□□□□ -1.08
DDX60-201ENST00000393743 BMP2KLQ5H9B9 411 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 INCENPQ9NQS7 918 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 SPAG1Q07617 926 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 EHBP1Q8NDI1 1231 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 CCDC8Q9H0W5 538 aaPredicted RBP8.28□□□□□ -1.08
DDX60-201ENST00000393743 FLT4P35916 1363 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 GCOM1H8Y6P7 765 aaPredicted RBP8.28□□□□□ -1.08
DDX60-201ENST00000393743 MYZAPP0CAP1 466 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 MCM4P33991 863 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 ATP2B3Q16720 1220 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 UBE3BQ7Z3V4 1068 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 DHX37Q8IY37 1157 aaKnown RBP8.28□□□□□ -1.08
DDX60-201ENST00000393743 ALS2CR12Q96Q35 445 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 MIS18AQ9NYP9 233 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 RTCBQ9Y3I0 505 aaKnown RBP8.28□□□□□ -1.08
DDX60-201ENST00000393743 STX6O43752 255 aa8.28□□□□□ -1.08
DDX60-201ENST00000393743 TOP1P11387 765 aaKnown RBP8.28□□□□□ -1.08
DDX60-201ENST00000393743 GOLGA6L10A0A0M3HER8 536 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 PABPN1LA6NDY0 278 aaKnown RBP8.27□□□□□ -1.09
DDX60-201ENST00000393743 CALRP27797 417 aaKnown RBP8.27□□□□□ -1.09
DDX60-201ENST00000393743 ATP6V1AP38606 617 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 METAP2P50579 478 aaKnown RBP eCLIP8.27□□□□□ -1.09
DDX60-201ENST00000393743 NEK1Q96PY6 1258 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 UBA5Q9GZZ9 404 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 USP16Q9Y5T5 823 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 ASXL2Q76L83 1435 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 CALML3P27482 149 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 KSR2Q6VAB6 950 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 SPC24Q8NBT2 197 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 CCDC97Q96F63 343 aaPredicted RBP8.27□□□□□ -1.09
DDX60-201ENST00000393743 RAPGEF6Q8TEU7 1601 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 WTAPQ15007 396 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 CCDC40Q4G0X9 1142 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 GIGYF2Q6Y7W6 1299 aaKnown RBP8.27□□□□□ -1.09
DDX60-201ENST00000393743 C16orf71Q8IYS4 520 aaPredicted RBP8.27□□□□□ -1.09
DDX60-201ENST00000393743 UBXN4Q92575 508 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 DCAF5Q96JK2 942 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 CRACR2AQ9BSW2 395 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 ZC3H12CQ9C0D7 883 aaKnown RBP8.27□□□□□ -1.09
DDX60-201ENST00000393743 WDR7Q9Y4E6 1490 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 PI4KAP2A4QPH2 592 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 PRPHP41219 470 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 PI4KAP1Q8N8J0 262 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 PIBF1Q8WXW3 757 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 TTC12Q9H892 705 aaPredicted RBP8.27□□□□□ -1.09
DDX60-201ENST00000393743 GRPEL1Q9HAV7 217 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 TBX22Q9Y458 520 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 ZFYVE9O95405 1425 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 RTL9Q8NET4 1388 aa8.27□□□□□ -1.09
DDX60-201ENST00000393743 RBM25P49756 843 aaKnown RBP8.26□□□□□ -1.09
DDX60-201ENST00000393743 TSPY3P0CV98 308 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 TSPY8P0CW00 308 aa8.26□□□□□ -1.09
DDX60-201ENST00000393743 ACTN2P35609 894 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms