RNA–Protein interactions for RNA: ENST00000393438.6

RUFY1-202, Transcript of RUN and FYVE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUFY1, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-202ENST00000393438 CTNNA3Q9UI47 895 aa16.49■□□□□ 0.23
RUFY1-202ENST00000393438 TMCO4Q5TGY1 634 aa16.48■□□□□ 0.23
RUFY1-202ENST00000393438 OGFOD1Q8N543 542 aa16.48■□□□□ 0.23
RUFY1-202ENST00000393438 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
RUFY1-202ENST00000393438 SLX1AQ9BQ83 275 aa16.48■□□□□ 0.23
RUFY1-202ENST00000393438 NWD1Q149M9 1564 aa16.48■□□□□ 0.23
RUFY1-202ENST00000393438 SLKQ9H2G2 1235 aaPredicted RBP16.47■□□□□ 0.23
RUFY1-202ENST00000393438 ATG3Q9NT62 314 aa16.47■□□□□ 0.23
RUFY1-202ENST00000393438 SHPRHQ149N8 1683 aa16.47■□□□□ 0.23
RUFY1-202ENST00000393438 CFAP53Q96M91 514 aa16.47■□□□□ 0.23
RUFY1-202ENST00000393438 CPSF2Q9P2I0 782 aaKnown RBP16.47■□□□□ 0.23
RUFY1-202ENST00000393438 ZRANB1Q9UGI0 708 aa16.47■□□□□ 0.23
RUFY1-202ENST00000393438 TBC1D2BQ9UPU7 963 aa16.47■□□□□ 0.23
RUFY1-202ENST00000393438 GOLGA2Q08379 1002 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 NOM1Q5C9Z4 860 aaKnown RBP16.46■□□□□ 0.23
RUFY1-202ENST00000393438 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 NGDNQ8NEJ9 315 aaKnown RBP16.46■□□□□ 0.23
RUFY1-202ENST00000393438 VEZTQ9HBM0 779 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 ZNF446Q9NWS9 450 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 LMTK3Q96Q04 1460 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 ANKARQ7Z5J8 1434 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 RBM47A0AV96 593 aaKnown RBP16.46■□□□□ 0.23
RUFY1-202ENST00000393438 TRIM66O15016 1216 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 FAM200BP0CF97 657 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 E2F4Q16254 413 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 NAIF1Q69YI7 327 aaPredicted RBP16.46■□□□□ 0.23
RUFY1-202ENST00000393438 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
RUFY1-202ENST00000393438 PDLIM2Q96JY6 352 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 KIF2CQ99661 725 aa16.46■□□□□ 0.23
RUFY1-202ENST00000393438 ADGRL3Q9HAR2 1447 aa16.46■□□□□ 0.22
RUFY1-202ENST00000393438 MMTAG2Q9BU76 263 aaKnown RBP16.45■□□□□ 0.22
RUFY1-202ENST00000393438 NRKQ7Z2Y5 1582 aa16.45■□□□□ 0.22
RUFY1-202ENST00000393438 USP6P35125 1406 aa16.45■□□□□ 0.22
RUFY1-202ENST00000393438 IPO5O00410 1097 aaKnown RBP16.45■□□□□ 0.22
RUFY1-202ENST00000393438 PSMD2Q13200 908 aa16.45■□□□□ 0.22
RUFY1-202ENST00000393438 MAMSTRQ6ZN01 415 aa16.45■□□□□ 0.22
RUFY1-202ENST00000393438 FAXDC2Q96IV6 333 aa16.45■□□□□ 0.22
RUFY1-202ENST00000393438 TACO1Q9BSH4 297 aaKnown RBP16.45■□□□□ 0.22
RUFY1-202ENST00000393438 PNMA2Q9UL42 364 aa16.45■□□□□ 0.22
RUFY1-202ENST00000393438 TTC21BQ7Z4L5 1316 aa16.45■□□□□ 0.22
RUFY1-202ENST00000393438 KDM2BQ8NHM5 1336 aa16.45■□□□□ 0.22
RUFY1-202ENST00000393438 MYBL2P10244 700 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 FBLN1P23142 703 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 SYT10Q6XYQ8 523 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 CCDC26Q8TAB7 109 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 EXOC5O00471 708 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 RWDD2BP57060 319 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 CCDC15Q0P6D6 951 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 COG3Q96JB2 828 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 IBTKQ9P2D0 1353 aaPredicted RBP16.44■□□□□ 0.22
RUFY1-202ENST00000393438 STRCQ7RTU9 1775 aa16.44■□□□□ 0.22
RUFY1-202ENST00000393438 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
RUFY1-202ENST00000393438 THOC1Q96FV9 657 aaKnown RBP16.43■□□□□ 0.22
RUFY1-202ENST00000393438 IFT88Q13099 833 aa16.43■□□□□ 0.22
RUFY1-202ENST00000393438 CCDC39Q9UFE4 941 aa16.43■□□□□ 0.22
RUFY1-202ENST00000393438 NFXL1Q6ZNB6 911 aa16.42■□□□□ 0.22
RUFY1-202ENST00000393438 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
RUFY1-202ENST00000393438 NFATC2IPQ8NCF5 419 aa16.42■□□□□ 0.22
RUFY1-202ENST00000393438 BLOC1S6Q9UL45 172 aa16.42■□□□□ 0.22
RUFY1-202ENST00000393438 RIOK3O14730 519 aaKnown RBP16.42■□□□□ 0.22
RUFY1-202ENST00000393438 HSP90B2PQ58FF3 399 aa16.42■□□□□ 0.22
RUFY1-202ENST00000393438 SH3GL3Q99963 347 aa16.42■□□□□ 0.22
RUFY1-202ENST00000393438 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.42■□□□□ 0.22
RUFY1-202ENST00000393438 APAF1O14727 1248 aa16.41■□□□□ 0.22
RUFY1-202ENST00000393438 ANKRD13AQ8IZ07 590 aa16.41■□□□□ 0.22
RUFY1-202ENST00000393438 AGAP3Q96P47 875 aa16.41■□□□□ 0.22
RUFY1-202ENST00000393438 ARHGEF10LQ9HCE6 1279 aa16.41■□□□□ 0.22
RUFY1-202ENST00000393438 ABCF2Q9UG63 623 aa16.41■□□□□ 0.22
RUFY1-202ENST00000393438 PDCD2Q16342 344 aaPredicted RBP16.41■□□□□ 0.22
RUFY1-202ENST00000393438 PEX19P40855 299 aa16.4■□□□□ 0.22
RUFY1-202ENST00000393438 SYCP1Q15431 976 aa16.4■□□□□ 0.22
RUFY1-202ENST00000393438 C16orf87Q6PH81 154 aa16.4■□□□□ 0.22
RUFY1-202ENST00000393438 PHC3Q8NDX5 983 aa16.4■□□□□ 0.22
RUFY1-202ENST00000393438 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
RUFY1-202ENST00000393438 CAPN15O75808 1086 aa16.4■□□□□ 0.22
RUFY1-202ENST00000393438 TBC1D25Q3MII6 688 aa16.4■□□□□ 0.22
RUFY1-202ENST00000393438 ZFYVE27Q5T4F4 411 aa16.4■□□□□ 0.22
RUFY1-202ENST00000393438 NCAPG2Q86XI2 1143 aa16.4■□□□□ 0.22
RUFY1-202ENST00000393438 TRMT2AQ8IZ69 625 aaKnown RBP16.4■□□□□ 0.22
RUFY1-202ENST00000393438 RPUSD2Q8IZ73 545 aaKnown RBP16.4■□□□□ 0.22
RUFY1-202ENST00000393438 TMCO5BA8MYB1 307 aa16.39■□□□□ 0.21
RUFY1-202ENST00000393438 CTIFO43310 598 aaKnown RBP16.39■□□□□ 0.21
RUFY1-202ENST00000393438 CENPQQ7L2Z9 268 aaPredicted RBP16.39■□□□□ 0.21
RUFY1-202ENST00000393438 PACS2Q86VP3 889 aa16.39■□□□□ 0.21
RUFY1-202ENST00000393438 FMNL3Q8IVF7 1028 aa16.39■□□□□ 0.21
RUFY1-202ENST00000393438 IRF2BPLQ9H1B7 796 aa16.39■□□□□ 0.21
RUFY1-202ENST00000393438 RABEP1Q15276 862 aa16.39■□□□□ 0.21
RUFY1-202ENST00000393438 SKOR2Q2VWA4 1001 aaPredicted RBP16.39■□□□□ 0.21
RUFY1-202ENST00000393438 C8orf34Q49A92 452 aa16.39■□□□□ 0.21
RUFY1-202ENST00000393438 TXLNBQ8N3L3 684 aa16.39■□□□□ 0.21
RUFY1-202ENST00000393438 C21orf2O43822 256 aa16.38■□□□□ 0.21
RUFY1-202ENST00000393438 ESCO1Q5FWF5 840 aa16.38■□□□□ 0.21
RUFY1-202ENST00000393438 TTC21AQ8NDW8 1320 aa16.38■□□□□ 0.21
RUFY1-202ENST00000393438 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.38■□□□□ 0.21
RUFY1-202ENST00000393438 IQCGQ9H095 443 aaKnown RBP16.38■□□□□ 0.21
RUFY1-202ENST00000393438 COL3A1P02461 1466 aaPredicted RBP16.37■□□□□ 0.21
RUFY1-202ENST00000393438 FAM177BA6PVY3 158 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms