RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 ECHDC1Q9NTX5 307 aa18.24■□□□□ 0.51
SNX11-202ENST00000393405 OVOS2A0A0G2JMS6 1433 aa18.24■□□□□ 0.51
SNX11-202ENST00000393405 ZNF142P52746 1687 aaPredicted RBP18.24■□□□□ 0.51
SNX11-202ENST00000393405 TPM3P06753 285 aa18.24■□□□□ 0.51
SNX11-202ENST00000393405 KDM4AO75164 1064 aa18.23■□□□□ 0.51
SNX11-202ENST00000393405 AIMP1Q12904 312 aaKnown RBP18.23■□□□□ 0.51
SNX11-202ENST00000393405 SUCLG2Q96I99 432 aa18.23■□□□□ 0.51
SNX11-202ENST00000393405 KIF3AQ9Y496 699 aa18.23■□□□□ 0.51
SNX11-202ENST00000393405 DTNBO60941 627 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 LARGE1O95461 756 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 CASTP20810 708 aaKnown RBP18.22■□□□□ 0.51
SNX11-202ENST00000393405 CAMTA1Q9Y6Y1 1673 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 KIF20AO95235 890 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 IFIT2P09913 472 aaKnown RBP18.22■□□□□ 0.51
SNX11-202ENST00000393405 ZSCAN22P10073 491 aaPredicted RBP18.22■□□□□ 0.51
SNX11-202ENST00000393405 ADCK5Q3MIX3 580 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 AACSQ86V21 672 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 ATP6V1DQ9Y5K8 247 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 GRM8O00222 908 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 LINS1Q8NG48 757 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 LIMCH1Q9UPQ0 1083 aa18.22■□□□□ 0.51
SNX11-202ENST00000393405 SASH1O94885 1247 aa18.21■□□□□ 0.51
SNX11-202ENST00000393405 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
SNX11-202ENST00000393405 SLC39A6Q13433 755 aa18.21■□□□□ 0.5
SNX11-202ENST00000393405 PDIA6Q15084 440 aa18.21■□□□□ 0.5
SNX11-202ENST00000393405 PRPF40BQ6NWY9 871 aaKnown RBP18.21■□□□□ 0.5
SNX11-202ENST00000393405 FUCA2Q9BTY2 467 aa18.21■□□□□ 0.5
SNX11-202ENST00000393405 TTC12Q9H892 705 aaPredicted RBP18.21■□□□□ 0.5
SNX11-202ENST00000393405 TRPM3Q9HCF6 1732 aaPredicted RBP18.2■□□□□ 0.5
SNX11-202ENST00000393405 HCLS1P14317 486 aaPredicted RBP18.2■□□□□ 0.5
SNX11-202ENST00000393405 DDX21Q9NR30 783 aaKnown RBP eCLIP18.2■□□□□ 0.5
SNX11-202ENST00000393405 ERC1Q8IUD2 1116 aa18.2■□□□□ 0.5
SNX11-202ENST00000393405 RUFY2Q8WXA3 655 aa18.2■□□□□ 0.5
SNX11-202ENST00000393405 EAF2Q96CJ1 260 aaPredicted RBP18.2■□□□□ 0.5
SNX11-202ENST00000393405 BCL2L12Q9HB09 334 aa18.2■□□□□ 0.5
SNX11-202ENST00000393405 CNPY2Q9Y2B0 182 aa18.2■□□□□ 0.5
SNX11-202ENST00000393405 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.2■□□□□ 0.5
SNX11-202ENST00000393405 SYT1P21579 422 aa18.19■□□□□ 0.5
SNX11-202ENST00000393405 DDX54Q8TDD1 881 aaKnown RBP18.19■□□□□ 0.5
SNX11-202ENST00000393405 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
SNX11-202ENST00000393405 ADAMTS7Q9UKP4 1686 aa18.19■□□□□ 0.5
SNX11-202ENST00000393405 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
SNX11-202ENST00000393405 GPATCH3Q96I76 525 aa18.19■□□□□ 0.5
SNX11-202ENST00000393405 TLR7Q9NYK1 1049 aaKnown RBP18.19■□□□□ 0.5
SNX11-202ENST00000393405 ERBB3P21860 1342 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 STX6O43752 255 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
SNX11-202ENST00000393405 KRT28Q7Z3Y7 464 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 CCDC8Q9H0W5 538 aaPredicted RBP18.18■□□□□ 0.5
SNX11-202ENST00000393405 SIL1Q9H173 461 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 C5P01031 1676 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 UTYO14607 1347 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 KIAA1524Q8TCG1 905 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 EVI5LQ96CN4 794 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 FAM227BQ96M60 508 aa18.18■□□□□ 0.5
SNX11-202ENST00000393405 NPHP4O75161 1426 aaPredicted RBP18.18■□□□□ 0.5
SNX11-202ENST00000393405 F13A1P00488 732 aa18.17■□□□□ 0.5
SNX11-202ENST00000393405 DDX58O95786 925 aaKnown RBP18.17■□□□□ 0.5
SNX11-202ENST00000393405 COL9A3Q14050 684 aaPredicted RBP18.17■□□□□ 0.5
SNX11-202ENST00000393405 TPRNQ4KMQ1 711 aa18.17■□□□□ 0.5
SNX11-202ENST00000393405 CCDC83Q8IWF9 413 aa18.17■□□□□ 0.5
SNX11-202ENST00000393405 SMC3Q9UQE7 1217 aa18.17■□□□□ 0.5
SNX11-202ENST00000393405 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
SNX11-202ENST00000393405 U2AF2P26368 475 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNX11-202ENST00000393405 NECTIN1Q15223 517 aa18.16■□□□□ 0.5
SNX11-202ENST00000393405 ZNF790Q6PG37 636 aa18.16■□□□□ 0.5
SNX11-202ENST00000393405 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
SNX11-202ENST00000393405 MYL6BP14649 208 aa18.16■□□□□ 0.5
SNX11-202ENST00000393405 G3BP1Q13283 466 aaKnown RBP eCLIP18.16■□□□□ 0.5
SNX11-202ENST00000393405 PDRG1Q9NUG6 133 aa18.16■□□□□ 0.5
SNX11-202ENST00000393405 KDM6AO15550 1401 aaPredicted RBP18.16■□□□□ 0.5
SNX11-202ENST00000393405 GOLGA6L6A8MZA4 724 aa18.15■□□□□ 0.5
SNX11-202ENST00000393405 ST3GAL1Q11201 340 aa18.15■□□□□ 0.5
SNX11-202ENST00000393405 CHAF1AQ13111 956 aaPredicted RBP18.15■□□□□ 0.5
SNX11-202ENST00000393405 NMIQ13287 307 aaPredicted RBP18.15■□□□□ 0.5
SNX11-202ENST00000393405 RIC3Q7Z5B4 369 aa18.15■□□□□ 0.5
SNX11-202ENST00000393405 ZSWIM6Q9HCJ5 1215 aa18.15■□□□□ 0.5
SNX11-202ENST00000393405 TMEM51Q9NW97 253 aa18.15■□□□□ 0.5
SNX11-202ENST00000393405 RBM8AQ9Y5S9 174 aaKnown RBP18.15■□□□□ 0.5
SNX11-202ENST00000393405 VPS53Q5VIR6 699 aa18.15■□□□□ 0.5
SNX11-202ENST00000393405 KCNB2Q92953 911 aa18.15■□□□□ 0.5
SNX11-202ENST00000393405 SCN11AQ9UI33 1791 aa18.15■□□□□ 0.5
SNX11-202ENST00000393405 ZBTB22O15209 634 aa18.14■□□□□ 0.5
SNX11-202ENST00000393405 PDCL2Q8N4E4 241 aa18.14■□□□□ 0.5
SNX11-202ENST00000393405 GJB2P29033 226 aa18.14■□□□□ 0.49
SNX11-202ENST00000393405 EPHA10Q5JZY3 1008 aa18.14■□□□□ 0.49
SNX11-202ENST00000393405 TM6SF1Q9BZW5 370 aa18.14■□□□□ 0.49
SNX11-202ENST00000393405 BCL11BQ9C0K0 894 aaPredicted RBP18.14■□□□□ 0.49
SNX11-202ENST00000393405 BOLA2Q9H3K6 86 aa18.14■□□□□ 0.49
SNX11-202ENST00000393405 CYP46A1Q9Y6A2 500 aa18.14■□□□□ 0.49
SNX11-202ENST00000393405 A0A0D9SFI3 127 aa18.14■□□□□ 0.49
SNX11-202ENST00000393405 NPHP3Q7Z494 1330 aa18.14■□□□□ 0.49
SNX11-202ENST00000393405 NFATC2IPQ8NCF5 419 aa18.14■□□□□ 0.49
SNX11-202ENST00000393405 SLC52A2Q9HAB3 445 aa18.14■□□□□ 0.49
SNX11-202ENST00000393405 NEURL1BA8MQ27 555 aa18.13■□□□□ 0.49
SNX11-202ENST00000393405 CREB3L3Q68CJ9 461 aa18.13■□□□□ 0.49
SNX11-202ENST00000393405 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
SNX11-202ENST00000393405 RAPGEF4Q8WZA2 1011 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms