RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 CCDC196A0A1B0GTZ2 297 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 ZSCAN29Q8IWY8 852 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-203ENST00000393287 ZNF622Q969S3 477 aaKnown RBP eCLIP9.61□□□□□ -0.87
ATXN3-203ENST00000393287 MPHOSPH6Q99547 160 aaKnown RBP9.61□□□□□ -0.87
ATXN3-203ENST00000393287 LRRFIP2Q9Y608 721 aaKnown RBP9.61□□□□□ -0.87
ATXN3-203ENST00000393287 OVOS2A0A0G2JMS6 1433 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 OVOS2A0A0J9YW53 1432 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 OVOS2Q6IE36 1432 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 PIP4K2AP48426 406 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-203ENST00000393287 BARGINQ6ZT62 677 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 NLGN1Q8N2Q7 840 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 CRACR2BQ8N4Y2 399 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-203ENST00000393287 AXIN2Q9Y2T1 843 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
ATXN3-203ENST00000393287 POLR3DP05423 398 aaPredicted RBP9.61□□□□□ -0.87
ATXN3-203ENST00000393287 LOC102724428A0A0B4J2F2 783 aa9.6□□□□□ -0.87
ATXN3-203ENST00000393287 SIK1P57059 783 aa9.6□□□□□ -0.87
ATXN3-203ENST00000393287 CCDC73Q6ZRK6 1079 aa9.6□□□□□ -0.87
ATXN3-203ENST00000393287 MAST3O60307 1309 aa9.6□□□□□ -0.87
ATXN3-203ENST00000393287 GRM8O00222 908 aa9.6□□□□□ -0.87
ATXN3-203ENST00000393287 LDHAL6AQ6ZMR3 332 aa9.6□□□□□ -0.87
ATXN3-203ENST00000393287 SLKQ9H2G2 1235 aaPredicted RBP9.6□□□□□ -0.87
ATXN3-203ENST00000393287 MSNP26038 577 aaKnown RBP9.6□□□□□ -0.87
ATXN3-203ENST00000393287 ADGRB1O14514 1584 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 C6orf229H3BNL8 230 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 IDH1O75874 414 aaKnown RBP9.59□□□□□ -0.87
ATXN3-203ENST00000393287 HOOK2Q96ED9 719 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 HDAC1Q13547 482 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-203ENST00000393287 CCDC191Q8NCU4 936 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 ECHDC1Q9NTX5 307 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 GNAT2P19087 354 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 CRNKL1Q9BZJ0 848 aaKnown RBP9.59□□□□□ -0.87
ATXN3-203ENST00000393287 HMG20BQ9P0W2 317 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 CPDO75976 1380 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 ANXA1P04083 346 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 TRIM27P14373 513 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 PDE6BP35913 854 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 TNIP1Q15025 636 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 CNBD1Q8NA66 436 aa9.59□□□□□ -0.87
ATXN3-203ENST00000393287 GOLGA6L19H0YKK7 550 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 DHX8Q14562 1220 aaKnown RBP9.58□□□□□ -0.88
ATXN3-203ENST00000393287 BLOC1S2Q6QNY1 142 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 MROH2AA6NES4 1674 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 SPATA31A1Q5TZJ5 1347 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 IL17REQ8NFR9 667 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 CEP131Q9UPN4 1083 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 ATP5J2-PTCD1G3V325 749 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 UBE3BQ7Z3V4 1068 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 C8orf58Q8NAV2 365 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 CDK5RAP3Q96JB5 506 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 CEP89Q96ST8 783 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 NAT10Q9H0A0 1025 aaKnown RBP9.58□□□□□ -0.88
ATXN3-203ENST00000393287 TTC41PQ6P2S7 1318 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 NF2P35240 595 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 ATP8B2P98198 1209 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 PDE4BQ07343 736 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 RRP12Q5JTH9 1297 aaKnown RBP9.58□□□□□ -0.88
ATXN3-203ENST00000393287 PHAXQ9H814 394 aaKnown RBP9.58□□□□□ -0.88
ATXN3-203ENST00000393287 CABP5Q9NP86 173 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 QRICH2Q9H0J4 1663 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 CCDC85AQ96PX6 553 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-203ENST00000393287 NAPBQ9H115 298 aa9.58□□□□□ -0.88
ATXN3-203ENST00000393287 SPATA31A5Q5VU36 1347 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 SPATA31A7Q8IWB4 1347 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 GOLGA6L3A6NEY3 463 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 CCDC12Q8WUD4 166 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-203ENST00000393287 SEC63Q9UGP8 760 aaKnown RBP9.57□□□□□ -0.88
ATXN3-203ENST00000393287 ALDH1B1P30837 517 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 ZNF444Q8N0Y2 327 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-203ENST00000393287 METTL22Q9BUU2 404 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-203ENST00000393287 PDRG1Q9NUG6 133 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 F6X3S4 739 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 TMC4Q7Z404 712 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 SH3TC1Q8TE82 1336 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 EIF4A1P60842 406 aaKnown RBP9.57□□□□□ -0.88
ATXN3-203ENST00000393287 JDP2Q8WYK2 163 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 SSH2Q76I76 1423 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 IQCA1Q86XH1 822 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 MKNK2Q9HBH9 465 aa9.57□□□□□ -0.88
ATXN3-203ENST00000393287 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-203ENST00000393287 IRS4O14654 1257 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-203ENST00000393287 CCDC125Q86Z20 511 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 VAMP4O75379 141 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 ABCF2Q9UG63 623 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 CYP27B1O15528 508 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 PDE8AO60658 829 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 TNNI2P48788 182 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 FAM182BQ5T319 152 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 BICD2Q8TD16 824 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 SH2B1Q9NRF2 756 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-203ENST00000393287 VPS37CA5D8V6 355 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-203ENST00000393287 BECN2A8MW95 431 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 LMOD1P29536 600 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-203ENST00000393287 OLFM4Q6UX06 510 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 CUL5Q93034 780 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 DACH1Q9UI36 760 aa9.56□□□□□ -0.88
ATXN3-203ENST00000393287 OGFOD1Q8N543 542 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 CNNM2Q9H8M5 875 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 DENND2AQ9ULE3 1009 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 521.7 ms