RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 KDM2BQ8NHM5 1336 aa17.1■□□□□ 0.33
PTN-202ENST00000393083 TCIRG1Q13488 830 aa17.1■□□□□ 0.33
PTN-202ENST00000393083 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
PTN-202ENST00000393083 NLGN2Q8NFZ4 835 aa17.1■□□□□ 0.33
PTN-202ENST00000393083 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
PTN-202ENST00000393083 KIF13BQ9NQT8 1826 aa17.09■□□□□ 0.33
PTN-202ENST00000393083 GPTP24298 496 aa17.09■□□□□ 0.33
PTN-202ENST00000393083 PRR5LQ6MZQ0 368 aa17.09■□□□□ 0.33
PTN-202ENST00000393083 CENPQQ7L2Z9 268 aaPredicted RBP17.09■□□□□ 0.33
PTN-202ENST00000393083 FKBP5Q13451 457 aaPredicted RBP17.08■□□□□ 0.32
PTN-202ENST00000393083 HSP90AB3PQ58FF7 597 aa17.08■□□□□ 0.32
PTN-202ENST00000393083 RIC3Q7Z5B4 369 aa17.08■□□□□ 0.32
PTN-202ENST00000393083 CHMP4BQ9H444 224 aaKnown RBP17.08■□□□□ 0.32
PTN-202ENST00000393083 DDX58O95786 925 aaKnown RBP17.07■□□□□ 0.32
PTN-202ENST00000393083 SUSD4Q5VX71 490 aa17.07■□□□□ 0.32
PTN-202ENST00000393083 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
PTN-202ENST00000393083 KSR2Q6VAB6 950 aa17.07■□□□□ 0.32
PTN-202ENST00000393083 NBPF5PQ86XG9 351 aaPredicted RBP17.07■□□□□ 0.32
PTN-202ENST00000393083 ISCA1Q9BUE6 129 aa17.07■□□□□ 0.32
PTN-202ENST00000393083 ADCY9O60503 1353 aa17.07■□□□□ 0.32
PTN-202ENST00000393083 PI4KAP2A4QPH2 592 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 PARP10Q53GL7 1025 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 NLRP10Q86W26 655 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 PI4KAP1Q8N8J0 262 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 CNBD1Q8NA66 436 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 ZBTB40Q9NUA8 1239 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 PCDHB15Q9Y5E8 787 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 F6X3S4 739 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 TGFB2P61812 414 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 TRIM28Q13263 835 aaKnown RBP17.06■□□□□ 0.32
PTN-202ENST00000393083 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 CCDC24Q8N4L8 307 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 ARFGEF2Q9Y6D5 1785 aa17.06■□□□□ 0.32
PTN-202ENST00000393083 IBTKQ9P2D0 1353 aaPredicted RBP17.05■□□□□ 0.32
PTN-202ENST00000393083 FAM177BA6PVY3 158 aa17.05■□□□□ 0.32
PTN-202ENST00000393083 NTSR2O95665 410 aa17.05■□□□□ 0.32
PTN-202ENST00000393083 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
PTN-202ENST00000393083 SLC4A10Q6U841 1118 aa17.05■□□□□ 0.32
PTN-202ENST00000393083 METTL22Q9BUU2 404 aaPredicted RBP17.05■□□□□ 0.32
PTN-202ENST00000393083 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
PTN-202ENST00000393083 ANKRD36CQ5JPF3 1778 aa17.04■□□□□ 0.32
PTN-202ENST00000393083 ATP5J2-PTCD1G3V325 749 aa17.04■□□□□ 0.32
PTN-202ENST00000393083 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
PTN-202ENST00000393083 CCT4P50991 539 aaKnown RBP17.04■□□□□ 0.32
PTN-202ENST00000393083 BRIP1Q9BX63 1249 aa17.04■□□□□ 0.32
PTN-202ENST00000393083 NYXQ9GZU5 481 aa17.04■□□□□ 0.32
PTN-202ENST00000393083 A0A0G2JLW4 131 aa17.03■□□□□ 0.32
PTN-202ENST00000393083 IGHDP01880 384 aa17.03■□□□□ 0.32
PTN-202ENST00000393083 DPEP1P16444 411 aa17.03■□□□□ 0.32
PTN-202ENST00000393083 KCNA3P22001 575 aa17.03■□□□□ 0.32
PTN-202ENST00000393083 PPP1R42Q7Z4L9 355 aa17.03■□□□□ 0.32
PTN-202ENST00000393083 NUTM1Q86Y26 1132 aa17.03■□□□□ 0.32
PTN-202ENST00000393083 MYD88Q99836 296 aa17.03■□□□□ 0.32
PTN-202ENST00000393083 ST5P78524 1137 aa17.02■□□□□ 0.32
PTN-202ENST00000393083 ERFEQ4G0M1 354 aa17.02■□□□□ 0.32
PTN-202ENST00000393083 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
PTN-202ENST00000393083 ABCC12Q96J65 1359 aa17.02■□□□□ 0.31
PTN-202ENST00000393083 NPHP1O15259 732 aa17.02■□□□□ 0.31
PTN-202ENST00000393083 IGKV5-2P06315 115 aa17.02■□□□□ 0.31
PTN-202ENST00000393083 CHRNA5P30532 468 aa17.02■□□□□ 0.31
PTN-202ENST00000393083 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.31
PTN-202ENST00000393083 ANKRD31Q8N7Z5 1873 aa17.02■□□□□ 0.31
PTN-202ENST00000393083 KLRG2A4D1S0 409 aaPredicted RBP17.01■□□□□ 0.31
PTN-202ENST00000393083 RWDD1Q9H446 243 aaPredicted RBP17.01■□□□□ 0.31
PTN-202ENST00000393083 C1orf115Q9H7X2 142 aa17.01■□□□□ 0.31
PTN-202ENST00000393083 GTF2E1P29083 439 aaPredicted RBP17■□□□□ 0.31
PTN-202ENST00000393083 PDE6BP35913 854 aa17■□□□□ 0.31
PTN-202ENST00000393083 SLC10A5Q5PT55 438 aa17■□□□□ 0.31
PTN-202ENST00000393083 SYNE4Q8N205 404 aa17■□□□□ 0.31
PTN-202ENST00000393083 CCDC191Q8NCU4 936 aa17■□□□□ 0.31
PTN-202ENST00000393083 GOLGB1Q14789 3259 aaKnown RBP16.99■□□□□ 0.31
PTN-202ENST00000393083 C2CD5Q86YS7 1000 aa16.99■□□□□ 0.31
PTN-202ENST00000393083 TRMT112Q9UI30 125 aaKnown RBP16.99■□□□□ 0.31
PTN-202ENST00000393083 RIC1Q4ADV7 1423 aa16.99■□□□□ 0.31
PTN-202ENST00000393083 NEURL1BA8MQ27 555 aa16.98■□□□□ 0.31
PTN-202ENST00000393083 HDAC1Q13547 482 aaPredicted RBP16.98■□□□□ 0.31
PTN-202ENST00000393083 MEIS3Q99687 375 aa16.98■□□□□ 0.31
PTN-202ENST00000393083 CWC25Q9NXE8 425 aaPredicted RBP16.98■□□□□ 0.31
PTN-202ENST00000393083 PDZRN3Q9UPQ7 1066 aa16.98■□□□□ 0.31
PTN-202ENST00000393083 SH3TC1Q8TE82 1336 aa16.98■□□□□ 0.31
PTN-202ENST00000393083 H0YIN7 160 aa16.98■□□□□ 0.31
PTN-202ENST00000393083 NEXNQ0ZGT2 675 aa16.98■□□□□ 0.31
PTN-202ENST00000393083 CWF19L2Q2TBE0 894 aaKnown RBP16.98■□□□□ 0.31
PTN-202ENST00000393083 BEND3Q5T5X7 828 aa16.98■□□□□ 0.31
PTN-202ENST00000393083 FAM89AQ96GI7 184 aa16.98■□□□□ 0.31
PTN-202ENST00000393083 SRGNP10124 158 aa16.97■□□□□ 0.31
PTN-202ENST00000393083 YBX3P16989 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
PTN-202ENST00000393083 C3orf67Q6ZVT6 689 aa16.97■□□□□ 0.31
PTN-202ENST00000393083 LINS1Q8NG48 757 aa16.97■□□□□ 0.31
PTN-202ENST00000393083 PIM2Q9P1W9 311 aa16.97■□□□□ 0.31
PTN-202ENST00000393083 TNRC6CQ9HCJ0 1690 aaKnown RBP16.96■□□□□ 0.31
PTN-202ENST00000393083 CRY2Q49AN0 593 aa16.96■□□□□ 0.31
PTN-202ENST00000393083 ZBTB38Q8NAP3 1195 aaPredicted RBP16.96■□□□□ 0.31
PTN-202ENST00000393083 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.31
PTN-202ENST00000393083 COL11A2P13942 1736 aaPredicted RBP16.96■□□□□ 0.31
PTN-202ENST00000393083 BRCA1P38398 1863 aaKnown RBP16.95■□□□□ 0.3
PTN-202ENST00000393083 PCCAP05165 728 aaPredicted RBP16.95■□□□□ 0.3
PTN-202ENST00000393083 HCLS1P14317 486 aaPredicted RBP16.95■□□□□ 0.3
PTN-202ENST00000393083 SRCIN1Q9C0H9 1055 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms