RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 GRM8O00222 908 aa17.98■□□□□ 0.47
SHTN1-204ENST00000392903 HSP90AB4PQ58FF6 505 aa17.98■□□□□ 0.47
SHTN1-204ENST00000392903 SUCLG2Q96I99 432 aa17.98■□□□□ 0.47
SHTN1-204ENST00000392903 COPS6Q7L5N1 327 aa17.97■□□□□ 0.47
SHTN1-204ENST00000392903 AOX1Q06278 1338 aa17.97■□□□□ 0.47
SHTN1-204ENST00000392903 GADD45BO75293 160 aaPredicted RBP17.97■□□□□ 0.47
SHTN1-204ENST00000392903 MCCP23508 829 aa17.97■□□□□ 0.47
SHTN1-204ENST00000392903 MTX1Q13505 466 aa17.97■□□□□ 0.47
SHTN1-204ENST00000392903 PDCL2Q8N4E4 241 aa17.97■□□□□ 0.47
SHTN1-204ENST00000392903 TMEM87AQ8NBN3 555 aa17.97■□□□□ 0.47
SHTN1-204ENST00000392903 XAGE3Q8WTP9 111 aa17.97■□□□□ 0.47
SHTN1-204ENST00000392903 KAZALD1Q96I82 304 aa17.97■□□□□ 0.47
SHTN1-204ENST00000392903 BICC1Q9H694 974 aaKnown RBP17.97■□□□□ 0.47
SHTN1-204ENST00000392903 IGKV5-2P06315 115 aa17.96■□□□□ 0.47
SHTN1-204ENST00000392903 CCDC183Q5T5S1 534 aa17.96■□□□□ 0.47
SHTN1-204ENST00000392903 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
SHTN1-204ENST00000392903 CLASRPQ8N2M8 674 aaKnown RBP17.96■□□□□ 0.47
SHTN1-204ENST00000392903 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.47
SHTN1-204ENST00000392903 SPATA31A3Q5VYP0 1347 aa17.96■□□□□ 0.46
SHTN1-204ENST00000392903 USP48Q86UV5 1035 aa17.96■□□□□ 0.46
SHTN1-204ENST00000392903 KLHL34Q8N239 644 aa17.96■□□□□ 0.46
SHTN1-204ENST00000392903 MPNDQ8N594 471 aa17.96■□□□□ 0.46
SHTN1-204ENST00000392903 ANKRD7Q92527 254 aa17.96■□□□□ 0.46
SHTN1-204ENST00000392903 DIAPH3Q9NSV4 1193 aa17.96■□□□□ 0.46
SHTN1-204ENST00000392903 TNS3Q68CZ2 1445 aa17.95■□□□□ 0.46
SHTN1-204ENST00000392903 ANAPC15P60006 121 aa17.95■□□□□ 0.46
SHTN1-204ENST00000392903 CWC27Q6UX04 472 aaKnown RBP17.95■□□□□ 0.46
SHTN1-204ENST00000392903 C17orf53Q8N3J3 647 aaPredicted RBP17.95■□□□□ 0.46
SHTN1-204ENST00000392903 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.95■□□□□ 0.46
SHTN1-204ENST00000392903 TCHHQ07283 1943 aa17.94■□□□□ 0.46
SHTN1-204ENST00000392903 KLHDC4Q8TBB5 520 aa17.94■□□□□ 0.46
SHTN1-204ENST00000392903 DCAF5Q96JK2 942 aa17.94■□□□□ 0.46
SHTN1-204ENST00000392903 SIL1Q9H173 461 aa17.94■□□□□ 0.46
SHTN1-204ENST00000392903 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.94■□□□□ 0.467e-7■■■■□ 20.9
SHTN1-204ENST00000392903 WDR33Q9C0J8 1336 aaKnown RBP17.94■□□□□ 0.46
SHTN1-204ENST00000392903 CNTROBQ8N137 903 aa17.94■□□□□ 0.46
SHTN1-204ENST00000392903 MYD88Q99836 296 aa17.94■□□□□ 0.46
SHTN1-204ENST00000392903 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
SHTN1-204ENST00000392903 COL18A1P39060 1754 aa17.94■□□□□ 0.46
SHTN1-204ENST00000392903 KDM4AO75164 1064 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 FGD1P98174 961 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 LARP1Q6PKG0 1096 aaKnown RBP17.93■□□□□ 0.46
SHTN1-204ENST00000392903 KIAA1524Q8TCG1 905 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 IL17RAQ96F46 866 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 DCCP43146 1447 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 FAM177BA6PVY3 158 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 CTIFO43310 598 aaKnown RBP17.93■□□□□ 0.46
SHTN1-204ENST00000392903 CABP4P57796 275 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 NEXNQ0ZGT2 675 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 BRINP3Q76B58 766 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 ADAMTS7Q9UKP4 1686 aa17.93■□□□□ 0.46
SHTN1-204ENST00000392903 SNRPA1P09661 255 aaKnown RBP17.92■□□□□ 0.46
SHTN1-204ENST00000392903 IFIT2P09913 472 aaKnown RBP17.92■□□□□ 0.46
SHTN1-204ENST00000392903 AACSQ86V21 672 aa17.92■□□□□ 0.46
SHTN1-204ENST00000392903 GDPD2Q9HCC8 539 aa17.92■□□□□ 0.46
SHTN1-204ENST00000392903 C5P01031 1676 aa17.92■□□□□ 0.46
SHTN1-204ENST00000392903 CHAF1AQ13111 956 aaPredicted RBP17.92■□□□□ 0.46
SHTN1-204ENST00000392903 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
SHTN1-204ENST00000392903 NEURL1BA8MQ27 555 aa17.91■□□□□ 0.46
SHTN1-204ENST00000392903 TPM3P06753 285 aa17.91■□□□□ 0.46
SHTN1-204ENST00000392903 HCLS1P14317 486 aaPredicted RBP17.91■□□□□ 0.46
SHTN1-204ENST00000392903 HDAC5Q9UQL6 1122 aa17.91■□□□□ 0.46
SHTN1-204ENST00000392903 SGSM2O43147 1006 aa17.91■□□□□ 0.46
SHTN1-204ENST00000392903 GLRX3O76003 335 aaKnown RBP17.91■□□□□ 0.46
SHTN1-204ENST00000392903 SASH1O94885 1247 aa17.91■□□□□ 0.46
SHTN1-204ENST00000392903 GCKRQ14397 625 aa17.91■□□□□ 0.46
SHTN1-204ENST00000392903 FEZ1Q99689 392 aa17.91■□□□□ 0.46
SHTN1-204ENST00000392903 PRDM11Q9NQV5 511 aa17.91■□□□□ 0.46
SHTN1-204ENST00000392903 ECHDC1Q9NTX5 307 aa17.91■□□□□ 0.46
SHTN1-204ENST00000392903 CRYBG1Q9Y4K1 1723 aa17.9■□□□□ 0.46
SHTN1-204ENST00000392903 RIOK3O14730 519 aaKnown RBP17.9■□□□□ 0.46
SHTN1-204ENST00000392903 G3BP1Q13283 466 aaKnown RBP eCLIP17.9■□□□□ 0.46
SHTN1-204ENST00000392903 EPHA10Q5JZY3 1008 aa17.9■□□□□ 0.46
SHTN1-204ENST00000392903 TOM1L2Q6ZVM7 507 aa17.9■□□□□ 0.46
SHTN1-204ENST00000392903 FMNL2Q96PY5 1086 aa17.9■□□□□ 0.46
SHTN1-204ENST00000392903 CCDC8Q9H0W5 538 aaPredicted RBP17.9■□□□□ 0.46
SHTN1-204ENST00000392903 RPAP1Q9BWH6 1393 aaPredicted RBP17.9■□□□□ 0.46
SHTN1-204ENST00000392903 TTC41PQ6P2S7 1318 aa17.9■□□□□ 0.46
SHTN1-204ENST00000392903 HSPA4P34932 840 aa17.9■□□□□ 0.46
SHTN1-204ENST00000392903 UTYO14607 1347 aa17.89■□□□□ 0.46
SHTN1-204ENST00000392903 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
SHTN1-204ENST00000392903 ATP5J2-PTCD1G3V325 749 aa17.89■□□□□ 0.45
SHTN1-204ENST00000392903 PTCD1O75127 700 aaKnown RBP17.89■□□□□ 0.45
SHTN1-204ENST00000392903 TAF3Q5VWG9 929 aa17.89■□□□□ 0.45
SHTN1-204ENST00000392903 ERC1Q8IUD2 1116 aa17.89■□□□□ 0.45
SHTN1-204ENST00000392903 EAF2Q96CJ1 260 aaPredicted RBP17.89■□□□□ 0.45
SHTN1-204ENST00000392903 METTL22Q9BUU2 404 aaPredicted RBP17.89■□□□□ 0.45
SHTN1-204ENST00000392903 LRP10Q7Z4F1 713 aa17.88■□□□□ 0.45
SHTN1-204ENST00000392903 KCNF1Q9H3M0 494 aa17.88■□□□□ 0.45
SHTN1-204ENST00000392903 UBE2HP62256 183 aa17.88■□□□□ 0.45
SHTN1-204ENST00000392903 FOXD4L6Q3SYB3 417 aaPredicted RBP17.88■□□□□ 0.45
SHTN1-204ENST00000392903 FOXD4L3Q6VB84 417 aaPredicted RBP17.88■□□□□ 0.45
SHTN1-204ENST00000392903 FUCA2Q9BTY2 467 aa17.88■□□□□ 0.45
SHTN1-204ENST00000392903 LSG1Q9H089 658 aaKnown RBP17.88■□□□□ 0.45
SHTN1-204ENST00000392903 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
SHTN1-204ENST00000392903 TLR7Q9NYK1 1049 aaKnown RBP17.88■□□□□ 0.45
SHTN1-204ENST00000392903 USP42Q9H9J4 1324 aaKnown RBP17.87■□□□□ 0.45
SHTN1-204ENST00000392903 U2AF2P26368 475 aaKnown RBP eCLIP17.87■□□□□ 0.452e-6■□□□□ 9.8
SHTN1-204ENST00000392903 RASEFQ8IZ41 740 aa17.87■□□□□ 0.45
SHTN1-204ENST00000392903 GPATCH3Q96I76 525 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms