RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 NUTM2EB1AL46 878 aaPredicted RBP22.23■■□□□ 1.15
TRAF3-203ENST00000392745 RBM10P98175 930 aaKnown RBP22.23■■□□□ 1.15
TRAF3-203ENST00000392745 NUTM2AQ8IVF1 878 aaPredicted RBP22.23■■□□□ 1.15
TRAF3-203ENST00000392745 RHPN1Q8TCX5 695 aa22.23■■□□□ 1.15
TRAF3-203ENST00000392745 EXOC5O00471 708 aa22.23■■□□□ 1.15
TRAF3-203ENST00000392745 MX1P20591 662 aa22.23■■□□□ 1.15
TRAF3-203ENST00000392745 HS1BP3Q53T59 392 aa22.23■■□□□ 1.15
TRAF3-203ENST00000392745 ARFGEF2Q9Y6D5 1785 aa22.23■■□□□ 1.15
TRAF3-203ENST00000392745 BICC1Q9H694 974 aaKnown RBP22.22■■□□□ 1.15
TRAF3-203ENST00000392745 ST18O60284 1047 aa22.22■■□□□ 1.15
TRAF3-203ENST00000392745 PLBD2Q8NHP8 589 aa22.22■■□□□ 1.15
TRAF3-203ENST00000392745 NSFL1CQ9UNZ2 370 aaKnown RBP22.22■■□□□ 1.15
TRAF3-203ENST00000392745 HDAC5Q9UQL6 1122 aa22.22■■□□□ 1.15
TRAF3-203ENST00000392745 TTLL7Q6ZT98 887 aa22.21■■□□□ 1.15
TRAF3-203ENST00000392745 ATG3Q9NT62 314 aa22.21■■□□□ 1.15
TRAF3-203ENST00000392745 ATP5J2-PTCD1G3V325 749 aa22.21■■□□□ 1.15
TRAF3-203ENST00000392745 TMEM63CQ9P1W3 806 aa22.21■■□□□ 1.15
TRAF3-203ENST00000392745 FOXD4L5Q5VV16 416 aaPredicted RBP22.2■■□□□ 1.14
TRAF3-203ENST00000392745 NUTM1Q86Y26 1132 aa22.2■■□□□ 1.14
TRAF3-203ENST00000392745 FOXD4L4Q8WXT5 416 aaPredicted RBP22.2■■□□□ 1.14
TRAF3-203ENST00000392745 JARID2Q92833 1246 aaPredicted RBP22.2■■□□□ 1.14
TRAF3-203ENST00000392745 STAP2Q9UGK3 403 aa22.2■■□□□ 1.14
TRAF3-203ENST00000392745 PA2G4Q9UQ80 394 aaKnown RBP22.2■■□□□ 1.14
TRAF3-203ENST00000392745 AFDNP55196 1824 aaKnown RBP22.2■■□□□ 1.14
TRAF3-203ENST00000392745 TUBGCP6Q96RT7 1819 aa22.2■■□□□ 1.14
TRAF3-203ENST00000392745 WNK3Q9BYP7 1800 aa22.2■■□□□ 1.14
TRAF3-203ENST00000392745 ZNF500O60304 480 aaPredicted RBP22.2■■□□□ 1.14
TRAF3-203ENST00000392745 KIF1BPQ96EK5 621 aa22.2■■□□□ 1.14
TRAF3-203ENST00000392745 NRAPQ86VF7 1730 aa22.19■■□□□ 1.14
TRAF3-203ENST00000392745 SPATA31A1Q5TZJ5 1347 aa22.19■■□□□ 1.14
TRAF3-203ENST00000392745 SYCE3A1L190 88 aa22.19■■□□□ 1.14
TRAF3-203ENST00000392745 EPHA10Q5JZY3 1008 aa22.19■■□□□ 1.14
TRAF3-203ENST00000392745 TERF1P54274 439 aa22.18■■□□□ 1.14
TRAF3-203ENST00000392745 CASC1Q6TDU7 716 aa22.18■■□□□ 1.14
TRAF3-203ENST00000392745 HSP90AB4PQ58FF6 505 aa22.17■■□□□ 1.14
TRAF3-203ENST00000392745 LRSAM1Q6UWE0 723 aa22.17■■□□□ 1.14
TRAF3-203ENST00000392745 DNAJC10Q8IXB1 793 aa22.16■■□□□ 1.14
TRAF3-203ENST00000392745 BCL9O00512 1426 aa22.16■■□□□ 1.14
TRAF3-203ENST00000392745 UBAP1LF5GYI3 381 aa22.16■■□□□ 1.14
TRAF3-203ENST00000392745 ZKSCAN5Q9Y2L8 839 aa22.16■■□□□ 1.14
TRAF3-203ENST00000392745 REC8O95072 547 aa22.15■■□□□ 1.14
TRAF3-203ENST00000392745 OS9Q13438 667 aaPredicted RBP22.15■■□□□ 1.14
TRAF3-203ENST00000392745 FAM13BQ9NYF5 915 aa22.15■■□□□ 1.14
TRAF3-203ENST00000392745 NUP188Q5SRE5 1749 aa22.15■■□□□ 1.14
TRAF3-203ENST00000392745 UBE3BQ7Z3V4 1068 aa22.15■■□□□ 1.14
TRAF3-203ENST00000392745 A0A087WZG4 1122 aa22.14■■□□□ 1.13
TRAF3-203ENST00000392745 SYTL4Q96C24 671 aaPredicted RBP22.14■■□□□ 1.13
TRAF3-203ENST00000392745 SLC4A9Q96Q91 983 aa22.14■■□□□ 1.13
TRAF3-203ENST00000392745 ZBTB3Q9H5J0 574 aa22.14■■□□□ 1.13
TRAF3-203ENST00000392745 THRAP3Q9Y2W1 955 aaKnown RBP22.14■■□□□ 1.13
TRAF3-203ENST00000392745 ERC2O15083 957 aa22.14■■□□□ 1.13
TRAF3-203ENST00000392745 UNC5CLQ8IV45 518 aa22.14■■□□□ 1.13
TRAF3-203ENST00000392745 CASP7P55210 303 aa22.13■■□□□ 1.13
TRAF3-203ENST00000392745 RNF214Q8ND24 703 aa22.13■■□□□ 1.13
TRAF3-203ENST00000392745 KLHDC4Q8TBB5 520 aa22.13■■□□□ 1.13
TRAF3-203ENST00000392745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.13■■□□□ 1.13
TRAF3-203ENST00000392745 LRP6O75581 1613 aa22.13■■□□□ 1.13
TRAF3-203ENST00000392745 CDCA7Q9BWT1 371 aaPredicted RBP22.13■■□□□ 1.13
TRAF3-203ENST00000392745 SPATA31A5Q5VU36 1347 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 SPATA31A7Q8IWB4 1347 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 UQCRHLA0A096LP55 91 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 UQCRHP07919 91 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 DDB1Q16531 1140 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 PI4K2BQ8TCG2 481 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 TEX13AQ9BXU3 409 aaPredicted RBP22.12■■□□□ 1.13
TRAF3-203ENST00000392745 AOX1Q06278 1338 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 SLIT2O94813 1529 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 TRIM6-TRIM34B2RNG4 842 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 SASH1O94885 1247 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 NEK4P51957 841 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 TMX3Q96JJ7 454 aa22.12■■□□□ 1.13
TRAF3-203ENST00000392745 RILPL2Q969X0 211 aa22.11■■□□□ 1.13
TRAF3-203ENST00000392745 ZNF330Q9Y3S2 320 aaPredicted RBP22.1■■□□□ 1.13
TRAF3-203ENST00000392745 NWD2Q9ULI1 1742 aa22.1■■□□□ 1.13
TRAF3-203ENST00000392745 H7C1W4 665 aa22.09■■□□□ 1.13
TRAF3-203ENST00000392745 CLASRPQ8N2M8 674 aaKnown RBP22.09■■□□□ 1.13
TRAF3-203ENST00000392745 SIL1Q9H173 461 aa22.09■■□□□ 1.13
TRAF3-203ENST00000392745 CCDC9Q9Y3X0 531 aaKnown RBP22.09■■□□□ 1.13
TRAF3-203ENST00000392745 RABL6Q3YEC7 729 aaPredicted RBP22.09■■□□□ 1.13
TRAF3-203ENST00000392745 ERC1Q8IUD2 1116 aa22.09■■□□□ 1.13
TRAF3-203ENST00000392745 MARCH10Q8NA82 808 aaPredicted RBP22.09■■□□□ 1.13
TRAF3-203ENST00000392745 DOT1LQ8TEK3 1739 aa22.09■■□□□ 1.13
TRAF3-203ENST00000392745 STARD3NLO95772 234 aa22.08■■□□□ 1.13
TRAF3-203ENST00000392745 G3BP1Q13283 466 aaKnown RBP eCLIP22.08■■□□□ 1.13
TRAF3-203ENST00000392745 COL15A1P39059 1388 aa22.08■■□□□ 1.13
TRAF3-203ENST00000392745 MAP4K4O95819 1239 aaPredicted RBP22.08■■□□□ 1.13
TRAF3-203ENST00000392745 RFX5P48382 616 aaPredicted RBP22.08■■□□□ 1.13
TRAF3-203ENST00000392745 CWC25Q9NXE8 425 aaPredicted RBP22.08■■□□□ 1.13
TRAF3-203ENST00000392745 CCDC39Q9UFE4 941 aa22.08■■□□□ 1.13
TRAF3-203ENST00000392745 CHMLP26374 656 aa22.07■■□□□ 1.12
TRAF3-203ENST00000392745 NOL8Q76FK4 1167 aaKnown RBP22.07■■□□□ 1.12
TRAF3-203ENST00000392745 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.07■■□□□ 1.12
TRAF3-203ENST00000392745 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
TRAF3-203ENST00000392745 BRD1O95696 1058 aa22.06■■□□□ 1.12
TRAF3-203ENST00000392745 MBD3O95983 291 aa22.06■■□□□ 1.12
TRAF3-203ENST00000392745 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
TRAF3-203ENST00000392745 MCM5P33992 734 aa22.06■■□□□ 1.12
TRAF3-203ENST00000392745 TJP1Q07157 1748 aa22.06■■□□□ 1.12
TRAF3-203ENST00000392745 BARGINQ6ZT62 677 aa22.06■■□□□ 1.12
TRAF3-203ENST00000392745 CCDC191Q8NCU4 936 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms