RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 NTSR2O95665 410 aa18.92■□□□□ 0.62
SUMO1-203ENST00000392246 ST5P78524 1137 aa18.92■□□□□ 0.62
SUMO1-203ENST00000392246 CWF19L2Q2TBE0 894 aaKnown RBP18.92■□□□□ 0.62
SUMO1-203ENST00000392246 BEND3Q5T5X7 828 aa18.92■□□□□ 0.62
SUMO1-203ENST00000392246 ATF7IPQ6VMQ6 1270 aa18.92■□□□□ 0.62
SUMO1-203ENST00000392246 TRMT112Q9UI30 125 aaKnown RBP18.92■□□□□ 0.62
SUMO1-203ENST00000392246 RNF123Q5XPI4 1314 aa18.91■□□□□ 0.62
SUMO1-203ENST00000392246 TRIM27P14373 513 aa18.9■□□□□ 0.62
SUMO1-203ENST00000392246 NUTM1Q86Y26 1132 aa18.9■□□□□ 0.62
SUMO1-203ENST00000392246 KLHL34Q8N239 644 aa18.9■□□□□ 0.62
SUMO1-203ENST00000392246 SRCIN1Q9C0H9 1055 aa18.9■□□□□ 0.62
SUMO1-203ENST00000392246 CD2APQ9Y5K6 639 aa18.9■□□□□ 0.62
SUMO1-203ENST00000392246 KIF13BQ9NQT8 1826 aa18.9■□□□□ 0.62
SUMO1-203ENST00000392246 PXDNLA1KZ92 1463 aa18.9■□□□□ 0.62
SUMO1-203ENST00000392246 C10orf71Q711Q0 1435 aa18.9■□□□□ 0.62
SUMO1-203ENST00000392246 ALDH1L1O75891 902 aa18.9■□□□□ 0.62
SUMO1-203ENST00000392246 ZBTB38Q8NAP3 1195 aaPredicted RBP18.9■□□□□ 0.62
SUMO1-203ENST00000392246 SH3TC1Q8TE82 1336 aa18.89■□□□□ 0.61
SUMO1-203ENST00000392246 GCKRQ14397 625 aa18.89■□□□□ 0.61
SUMO1-203ENST00000392246 ERFEQ4G0M1 354 aa18.89■□□□□ 0.61
SUMO1-203ENST00000392246 CCDC24Q8N4L8 307 aa18.89■□□□□ 0.61
SUMO1-203ENST00000392246 BRIP1Q9BX63 1249 aa18.89■□□□□ 0.61
SUMO1-203ENST00000392246 FHDC1Q9C0D6 1143 aaPredicted RBP18.89■□□□□ 0.61
SUMO1-203ENST00000392246 CCT4P50991 539 aaKnown RBP18.88■□□□□ 0.61
SUMO1-203ENST00000392246 FAM89AQ96GI7 184 aa18.88■□□□□ 0.61
SUMO1-203ENST00000392246 ABCC4O15439 1325 aa18.87■□□□□ 0.61
SUMO1-203ENST00000392246 PCCAP05165 728 aaPredicted RBP18.87■□□□□ 0.61
SUMO1-203ENST00000392246 SLC10A5Q5PT55 438 aa18.87■□□□□ 0.61
SUMO1-203ENST00000392246 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.87■□□□□ 0.61
SUMO1-203ENST00000392246 ANKRD31Q8N7Z5 1873 aa18.86■□□□□ 0.61
SUMO1-203ENST00000392246 PDE6BP35913 854 aa18.86■□□□□ 0.61
SUMO1-203ENST00000392246 TGFB2P61812 414 aa18.86■□□□□ 0.61
SUMO1-203ENST00000392246 RTL5Q5HYW3 569 aaPredicted RBP18.86■□□□□ 0.61
SUMO1-203ENST00000392246 CLUAP1Q96AJ1 413 aa18.86■□□□□ 0.61
SUMO1-203ENST00000392246 N4BP2Q86UW6 1770 aaPredicted RBP18.86■□□□□ 0.61
SUMO1-203ENST00000392246 SRCAPQ6ZRS2 3230 aa18.86■□□□□ 0.61
SUMO1-203ENST00000392246 ABCC12Q96J65 1359 aa18.85■□□□□ 0.61
SUMO1-203ENST00000392246 H7C1W4 665 aa18.85■□□□□ 0.61
SUMO1-203ENST00000392246 MS4A1P11836 297 aa18.85■□□□□ 0.61
SUMO1-203ENST00000392246 HSP90B1P14625 803 aaKnown RBP18.85■□□□□ 0.61
SUMO1-203ENST00000392246 FTSJ3Q8IY81 847 aaKnown RBP18.85■□□□□ 0.61
SUMO1-203ENST00000392246 SYNE4Q8N205 404 aa18.85■□□□□ 0.61
SUMO1-203ENST00000392246 SYT17Q9BSW7 474 aa18.85■□□□□ 0.61
SUMO1-203ENST00000392246 PDZRN3Q9UPQ7 1066 aa18.85■□□□□ 0.61
SUMO1-203ENST00000392246 TNNQ9UQP3 1299 aa18.85■□□□□ 0.61
SUMO1-203ENST00000392246 IRS4O14654 1257 aaPredicted RBP18.84■□□□□ 0.61
SUMO1-203ENST00000392246 INTS3Q68E01 1043 aaKnown RBP18.84■□□□□ 0.61
SUMO1-203ENST00000392246 DZIP1LQ8IYY4 767 aaKnown RBP18.84■□□□□ 0.61
SUMO1-203ENST00000392246 C9orf78Q9NZ63 289 aaPredicted RBP18.84■□□□□ 0.61
SUMO1-203ENST00000392246 RIC1Q4ADV7 1423 aa18.84■□□□□ 0.61
SUMO1-203ENST00000392246 GRM8O00222 908 aa18.84■□□□□ 0.61
SUMO1-203ENST00000392246 UBE3BQ7Z3V4 1068 aa18.84■□□□□ 0.61
SUMO1-203ENST00000392246 JARID2Q92833 1246 aaPredicted RBP18.84■□□□□ 0.61
SUMO1-203ENST00000392246 NLRP3Q96P20 1036 aa18.84■□□□□ 0.61
SUMO1-203ENST00000392246 CDHR2Q9BYE9 1310 aa18.83■□□□□ 0.61
SUMO1-203ENST00000392246 PLIN1O60240 522 aa18.83■□□□□ 0.6
SUMO1-203ENST00000392246 HCLS1P14317 486 aaPredicted RBP18.83■□□□□ 0.6
SUMO1-203ENST00000392246 DDX60Q8IY21 1712 aaKnown RBP18.82■□□□□ 0.6
SUMO1-203ENST00000392246 KLRG2A4D1S0 409 aaPredicted RBP18.82■□□□□ 0.6
SUMO1-203ENST00000392246 H0YIN7 160 aa18.82■□□□□ 0.6
SUMO1-203ENST00000392246 C2CD5Q86YS7 1000 aa18.82■□□□□ 0.6
SUMO1-203ENST00000392246 NLGN2Q8NFZ4 835 aa18.82■□□□□ 0.6
SUMO1-203ENST00000392246 CASP7P55210 303 aa18.81■□□□□ 0.6
SUMO1-203ENST00000392246 TMEM57Q8N5G2 664 aa18.81■□□□□ 0.6
SUMO1-203ENST00000392246 LAMB2P55268 1798 aa18.81■□□□□ 0.6
SUMO1-203ENST00000392246 A0A0G2JLW4 131 aa18.8■□□□□ 0.6
SUMO1-203ENST00000392246 PDE8AO60658 829 aa18.8■□□□□ 0.6
SUMO1-203ENST00000392246 RLBP1P12271 317 aa18.8■□□□□ 0.6
SUMO1-203ENST00000392246 DPEP1P16444 411 aa18.8■□□□□ 0.6
SUMO1-203ENST00000392246 CHRNA5P30532 468 aa18.8■□□□□ 0.6
SUMO1-203ENST00000392246 USP44Q9H0E7 712 aa18.8■□□□□ 0.6
SUMO1-203ENST00000392246 UTYO14607 1347 aa18.8■□□□□ 0.6
SUMO1-203ENST00000392246 TNRC6CQ9HCJ0 1690 aaKnown RBP18.8■□□□□ 0.6
SUMO1-203ENST00000392246 KIAA1551Q9HCM1 1747 aa18.8■□□□□ 0.6
SUMO1-203ENST00000392246 SRGNP10124 158 aa18.79■□□□□ 0.6
SUMO1-203ENST00000392246 PDE3AQ14432 1141 aa18.79■□□□□ 0.6
SUMO1-203ENST00000392246 CRY2Q49AN0 593 aa18.79■□□□□ 0.6
SUMO1-203ENST00000392246 PANK1Q8TE04 598 aa18.79■□□□□ 0.6
SUMO1-203ENST00000392246 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
SUMO1-203ENST00000392246 MYH3P11055 1940 aa18.79■□□□□ 0.6
SUMO1-203ENST00000392246 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
SUMO1-203ENST00000392246 KCNA3P22001 575 aa18.79■□□□□ 0.6
SUMO1-203ENST00000392246 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
SUMO1-203ENST00000392246 C3orf67Q6ZVT6 689 aa18.79■□□□□ 0.6
SUMO1-203ENST00000392246 MASTLQ96GX5 879 aa18.79■□□□□ 0.6
SUMO1-203ENST00000392246 DLEC1Q9Y238 1755 aa18.78■□□□□ 0.6
SUMO1-203ENST00000392246 NPR1P16066 1061 aa18.78■□□□□ 0.6
SUMO1-203ENST00000392246 SF3B3Q15393 1217 aaKnown RBP18.78■□□□□ 0.6
SUMO1-203ENST00000392246 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
SUMO1-203ENST00000392246 RPGRQ92834 1020 aaKnown RBP18.78■□□□□ 0.6
SUMO1-203ENST00000392246 ZNF622Q969S3 477 aaKnown RBP eCLIP18.78■□□□□ 0.6
SUMO1-203ENST00000392246 COL11A2P13942 1736 aaPredicted RBP18.77■□□□□ 0.6
SUMO1-203ENST00000392246 STYK1Q6J9G0 422 aa18.77■□□□□ 0.6
SUMO1-203ENST00000392246 PIM2Q9P1W9 311 aa18.77■□□□□ 0.6
SUMO1-203ENST00000392246 HDAC5Q9UQL6 1122 aa18.77■□□□□ 0.6
SUMO1-203ENST00000392246 GNAI3P08754 354 aa18.76■□□□□ 0.59
SUMO1-203ENST00000392246 BRCA1P38398 1863 aaKnown RBP18.76■□□□□ 0.59
SUMO1-203ENST00000392246 UBTFL1P0CB47 393 aaPredicted RBP18.75■□□□□ 0.59
SUMO1-203ENST00000392246 ALDH1B1P30837 517 aa18.75■□□□□ 0.59
SUMO1-203ENST00000392246 HOXA10P31260 410 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms