RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 CCDC30Q5VVM6 783 aa25.28■■□□□ 1.64
PDCD2-202ENST00000392090 ARFGEF2Q9Y6D5 1785 aa25.28■■□□□ 1.64
PDCD2-202ENST00000392090 TNRC6CQ9HCJ0 1690 aaKnown RBP25.27■■□□□ 1.64
PDCD2-202ENST00000392090 ANKRD36CQ5JPF3 1778 aa25.27■■□□□ 1.64
PDCD2-202ENST00000392090 CRY2Q49AN0 593 aa25.27■■□□□ 1.64
PDCD2-202ENST00000392090 NLRP10Q86W26 655 aa25.27■■□□□ 1.64
PDCD2-202ENST00000392090 GOLGA2Q08379 1002 aa25.26■■□□□ 1.63
PDCD2-202ENST00000392090 TSPYL6Q8N831 410 aa25.26■■□□□ 1.63
PDCD2-202ENST00000392090 TAOK3Q9H2K8 898 aa25.26■■□□□ 1.63
PDCD2-202ENST00000392090 RIC1Q4ADV7 1423 aa25.26■■□□□ 1.63
PDCD2-202ENST00000392090 CCDC88AQ3V6T2 1871 aa25.26■■□□□ 1.63
PDCD2-202ENST00000392090 CCDC93Q567U6 631 aa25.25■■□□□ 1.63
PDCD2-202ENST00000392090 RIC3Q7Z5B4 369 aa25.25■■□□□ 1.63
PDCD2-202ENST00000392090 WDR63Q8IWG1 891 aa25.25■■□□□ 1.63
PDCD2-202ENST00000392090 NLRP3Q96P20 1036 aa25.25■■□□□ 1.63
PDCD2-202ENST00000392090 TRMT112Q9UI30 125 aaKnown RBP25.25■■□□□ 1.63
PDCD2-202ENST00000392090 RNF123Q5XPI4 1314 aa25.25■■□□□ 1.63
PDCD2-202ENST00000392090 FER1L6Q2WGJ9 1857 aa25.25■■□□□ 1.63
PDCD2-202ENST00000392090 KDM2BQ8NHM5 1336 aa25.24■■□□□ 1.63
PDCD2-202ENST00000392090 ZC3H4Q9UPT8 1303 aaKnown RBP25.24■■□□□ 1.63
PDCD2-202ENST00000392090 PRELPP51888 382 aa25.24■■□□□ 1.63
PDCD2-202ENST00000392090 C7orf43Q8WVR3 580 aa25.24■■□□□ 1.63
PDCD2-202ENST00000392090 PHAXQ9H814 394 aaKnown RBP25.24■■□□□ 1.63
PDCD2-202ENST00000392090 SLC10A5Q5PT55 438 aa25.23■■□□□ 1.63
PDCD2-202ENST00000392090 RBM17Q96I25 401 aaKnown RBP25.23■■□□□ 1.63
PDCD2-202ENST00000392090 SH3TC1Q8TE82 1336 aa25.22■■□□□ 1.63
PDCD2-202ENST00000392090 LTBP3Q9NS15 1303 aa25.22■■□□□ 1.63
PDCD2-202ENST00000392090 ATP5J2-PTCD1G3V325 749 aa25.22■■□□□ 1.63
PDCD2-202ENST00000392090 TWISTNBQ3B726 338 aaPredicted RBP25.22■■□□□ 1.63
PDCD2-202ENST00000392090 ZNF428Q96B54 188 aa25.22■■□□□ 1.63
PDCD2-202ENST00000392090 STK31Q9BXU1 1019 aa25.22■■□□□ 1.63
PDCD2-202ENST00000392090 HOXA10P31260 410 aaPredicted RBP25.21■■□□□ 1.63
PDCD2-202ENST00000392090 C3orf67Q6ZVT6 689 aa25.21■■□□□ 1.63
PDCD2-202ENST00000392090 NMRK2Q9NPI5 230 aa25.21■■□□□ 1.63
PDCD2-202ENST00000392090 FANCIQ9NVI1 1328 aa25.2■■□□□ 1.62
PDCD2-202ENST00000392090 KIF3CO14782 793 aa25.2■■□□□ 1.62
PDCD2-202ENST00000392090 DDX58O95786 925 aaKnown RBP25.2■■□□□ 1.62
PDCD2-202ENST00000392090 HCLS1P14317 486 aaPredicted RBP25.2■■□□□ 1.62
PDCD2-202ENST00000392090 RTKN2Q8IZC4 609 aa25.2■■□□□ 1.62
PDCD2-202ENST00000392090 ISCA1Q9BUE6 129 aa25.2■■□□□ 1.62
PDCD2-202ENST00000392090 OLFM4Q6UX06 510 aa25.19■■□□□ 1.62
PDCD2-202ENST00000392090 SYNE4Q8N205 404 aa25.19■■□□□ 1.62
PDCD2-202ENST00000392090 CRAMP1Q96RY5 1269 aa25.19■■□□□ 1.62
PDCD2-202ENST00000392090 TCERG1O14776 1098 aaKnown RBP25.18■■□□□ 1.62
PDCD2-202ENST00000392090 FKBP4Q02790 459 aaKnown RBP eCLIP25.17■■□□□ 1.62
PDCD2-202ENST00000392090 TIAM2Q8IVF5 1701 aa25.17■■□□□ 1.62
PDCD2-202ENST00000392090 TRIM28Q13263 835 aaKnown RBP25.16■■□□□ 1.62
PDCD2-202ENST00000392090 CC2D2BQ6DHV5 1058 aa25.16■■□□□ 1.62
PDCD2-202ENST00000392090 C16orf71Q8IYS4 520 aaPredicted RBP25.16■■□□□ 1.62
PDCD2-202ENST00000392090 FAM89AQ96GI7 184 aa25.16■■□□□ 1.62
PDCD2-202ENST00000392090 MYD88Q99836 296 aa25.16■■□□□ 1.62
PDCD2-202ENST00000392090 TMX4Q9H1E5 349 aaPredicted RBP25.16■■□□□ 1.62
PDCD2-202ENST00000392090 DICER1Q9UPY3 1922 aaKnown RBP25.16■■□□□ 1.62
PDCD2-202ENST00000392090 GLTPD2A6NH11 291 aa25.15■■□□□ 1.62
PDCD2-202ENST00000392090 PPEF1O14829 653 aaPredicted RBP25.15■■□□□ 1.62
PDCD2-202ENST00000392090 DPY19L2Q6NUT2 758 aa25.15■■□□□ 1.62
PDCD2-202ENST00000392090 MYH16Q9H6N6 1097 aa25.15■■□□□ 1.62
PDCD2-202ENST00000392090 RRAGCQ9HB90 399 aa25.15■■□□□ 1.62
PDCD2-202ENST00000392090 SLC4A2P04920 1241 aa25.14■■□□□ 1.62
PDCD2-202ENST00000392090 RTL5Q5HYW3 569 aaPredicted RBP25.14■■□□□ 1.62
PDCD2-202ENST00000392090 ZNF277Q9NRM2 450 aaPredicted RBP25.14■■□□□ 1.62
PDCD2-202ENST00000392090 EXOSC9Q06265 439 aaKnown RBP25.13■■□□□ 1.61
PDCD2-202ENST00000392090 DDX46Q7L014 1031 aaKnown RBP25.13■■□□□ 1.61
PDCD2-202ENST00000392090 TOMM70O94826 608 aa25.12■■□□□ 1.61
PDCD2-202ENST00000392090 GRIPAP1Q4V328 841 aa25.12■■□□□ 1.61
PDCD2-202ENST00000392090 METTL22Q9BUU2 404 aaPredicted RBP25.12■■□□□ 1.61
PDCD2-202ENST00000392090 MAP3K2Q9Y2U5 619 aa25.12■■□□□ 1.61
PDCD2-202ENST00000392090 ABCC4O15439 1325 aa25.12■■□□□ 1.61
PDCD2-202ENST00000392090 LAMB2P55268 1798 aa25.11■■□□□ 1.61
PDCD2-202ENST00000392090 PI4KAP2A4QPH2 592 aa25.11■■□□□ 1.61
PDCD2-202ENST00000392090 KSR2Q6VAB6 950 aa25.11■■□□□ 1.61
PDCD2-202ENST00000392090 PI4KAP1Q8N8J0 262 aa25.11■■□□□ 1.61
PDCD2-202ENST00000392090 CCDC191Q8NCU4 936 aa25.11■■□□□ 1.61
PDCD2-202ENST00000392090 SPINK5Q9NQ38 1064 aaPredicted RBP25.11■■□□□ 1.61
PDCD2-202ENST00000392090 IRS4O14654 1257 aaPredicted RBP25.1■■□□□ 1.61
PDCD2-202ENST00000392090 ZBTB38Q8NAP3 1195 aaPredicted RBP25.1■■□□□ 1.61
PDCD2-202ENST00000392090 PSMD1Q99460 953 aa25.1■■□□□ 1.61
PDCD2-202ENST00000392090 CWC25Q9NXE8 425 aaPredicted RBP25.1■■□□□ 1.61
PDCD2-202ENST00000392090 VAMP4O75379 141 aa25.09■■□□□ 1.61
PDCD2-202ENST00000392090 BBOX1O75936 387 aa25.09■■□□□ 1.61
PDCD2-202ENST00000392090 HSP90B1P14625 803 aaKnown RBP25.09■■□□□ 1.61
PDCD2-202ENST00000392090 IARSP41252 1262 aaKnown RBP25.09■■□□□ 1.61
PDCD2-202ENST00000392090 NEXNQ0ZGT2 675 aa25.09■■□□□ 1.61
PDCD2-202ENST00000392090 ATP6V0A2Q9Y487 856 aa25.09■■□□□ 1.61
PDCD2-202ENST00000392090 CCER2I3L3R5 266 aa25.08■■□□□ 1.61
PDCD2-202ENST00000392090 VEGFAP15692 232 aaPredicted RBP25.08■■□□□ 1.61
PDCD2-202ENST00000392090 G2E3Q7L622 706 aa25.08■■□□□ 1.61
PDCD2-202ENST00000392090 DDX60Q8IY21 1712 aaKnown RBP25.07■■□□□ 1.6
PDCD2-202ENST00000392090 GRAPQ13588 217 aa25.07■■□□□ 1.6
PDCD2-202ENST00000392090 GRAPLQ8TC17 118 aaPredicted RBP25.07■■□□□ 1.6
PDCD2-202ENST00000392090 CACNA1FO60840 1977 aa25.06■■□□□ 1.6
PDCD2-202ENST00000392090 FLIIQ13045 1269 aa25.06■■□□□ 1.6
PDCD2-202ENST00000392090 SF3B3Q15393 1217 aaKnown RBP25.06■■□□□ 1.6
PDCD2-202ENST00000392090 SNED1Q8TER0 1413 aa25.05■■□□□ 1.6
PDCD2-202ENST00000392090 PCCAP05165 728 aaPredicted RBP25.05■■□□□ 1.6
PDCD2-202ENST00000392090 FKBP5Q13451 457 aaPredicted RBP25.05■■□□□ 1.6
PDCD2-202ENST00000392090 SLC51AQ86UW1 340 aa25.05■■□□□ 1.6
PDCD2-202ENST00000392090 RBM46Q8TBY0 533 aaKnown RBP25.05■■□□□ 1.6
PDCD2-202ENST00000392090 JDP2Q8WYK2 163 aa25.05■■□□□ 1.6
PDCD2-202ENST00000392090 DDNO94850 711 aaPredicted RBP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms