RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 STAP2Q9UGK3 403 aa17.28■□□□□ 0.36
LRRFIP1-204ENST00000392000 SBNO1A3KN83 1393 aa17.27■□□□□ 0.36
LRRFIP1-204ENST00000392000 RPAP1Q9BWH6 1393 aaPredicted RBP17.27■□□□□ 0.36
LRRFIP1-204ENST00000392000 RBM8AQ9Y5S9 174 aaKnown RBP17.27■□□□□ 0.36
LRRFIP1-204ENST00000392000 OVOS2A0A0J9YW53 1432 aa17.27■□□□□ 0.35
LRRFIP1-204ENST00000392000 OVOS2Q6IE36 1432 aa17.27■□□□□ 0.35
LRRFIP1-204ENST00000392000 LARP1Q6PKG0 1096 aaKnown RBP17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 TPCN1Q9ULQ1 816 aa17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 TRERF1Q96PN7 1200 aa17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 MAP3K5Q99683 1374 aa17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 BECN2A8MW95 431 aa17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 GOLGA6L19H0YKK7 550 aa17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 JAK2O60674 1132 aa17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 SMAP1Q8IYB5 467 aaPredicted RBP17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 RUFY2Q8WXA3 655 aa17.26■□□□□ 0.35
LRRFIP1-204ENST00000392000 ERICH4A6NGS2 130 aa17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 ZNF165P49910 485 aa17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 UVSSAQ2YD98 709 aa17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 BEND3Q5T5X7 828 aa17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 KIAA1524Q8TCG1 905 aa17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 FTOQ9C0B1 505 aaKnown RBP eCLIP17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 RAB11FIP4Q86YS3 637 aa17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 CGNQ9P2M7 1197 aaKnown RBP17.25■□□□□ 0.35
LRRFIP1-204ENST00000392000 ARHGEF10O15013 1369 aa17.24■□□□□ 0.35
LRRFIP1-204ENST00000392000 SLFNL1Q499Z3 407 aa17.24■□□□□ 0.35
LRRFIP1-204ENST00000392000 BLOC1S2Q6QNY1 142 aa17.24■□□□□ 0.35
LRRFIP1-204ENST00000392000 LETM1O95202 739 aaPredicted RBP17.24■□□□□ 0.35
LRRFIP1-204ENST00000392000 NMIQ13287 307 aaPredicted RBP17.24■□□□□ 0.35
LRRFIP1-204ENST00000392000 ISM2Q6H9L7 571 aa17.24■□□□□ 0.35
LRRFIP1-204ENST00000392000 CBX8Q9HC52 389 aa17.24■□□□□ 0.35
LRRFIP1-204ENST00000392000 CLIP2Q9UDT6 1046 aa17.24■□□□□ 0.35
LRRFIP1-204ENST00000392000 PTPRUQ92729 1446 aa17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 ZSCAN20P17040 1043 aaPredicted RBP17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 ZC3H6P61129 1189 aaKnown RBP17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 G3BP1Q13283 466 aaKnown RBP eCLIP17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 NR1I2O75469 434 aa17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 GLRX3O76003 335 aaKnown RBP17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 CCDC129Q6ZRS4 1044 aa17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 STK11IPQ8N1F8 1099 aa17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 CCDC112Q8NEF3 446 aa17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 FAM200AQ8TCP9 573 aa17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 ECHDC1Q9NTX5 307 aa17.23■□□□□ 0.35
LRRFIP1-204ENST00000392000 CHST3Q7LGC8 479 aa17.22■□□□□ 0.35
LRRFIP1-204ENST00000392000 EAF2Q96CJ1 260 aaPredicted RBP17.22■□□□□ 0.35
LRRFIP1-204ENST00000392000 USP16Q9Y5T5 823 aa17.22■□□□□ 0.35
LRRFIP1-204ENST00000392000 C1orf141Q5JVX7 400 aa17.22■□□□□ 0.35
LRRFIP1-204ENST00000392000 RIC3Q7Z5B4 369 aa17.22■□□□□ 0.35
LRRFIP1-204ENST00000392000 GPATCH3Q96I76 525 aa17.22■□□□□ 0.35
LRRFIP1-204ENST00000392000 CREB3L3Q68CJ9 461 aa17.22■□□□□ 0.35
LRRFIP1-204ENST00000392000 TTC14Q96N46 770 aa17.22■□□□□ 0.35
LRRFIP1-204ENST00000392000 BICC1Q9H694 974 aaKnown RBP17.22■□□□□ 0.35
LRRFIP1-204ENST00000392000 ADAMTS13Q76LX8 1427 aa17.21■□□□□ 0.35
LRRFIP1-204ENST00000392000 SUCLG2Q96I99 432 aa17.21■□□□□ 0.35
LRRFIP1-204ENST00000392000 PPP6R1Q9UPN7 881 aa17.21■□□□□ 0.35
LRRFIP1-204ENST00000392000 A0A0D9SFI3 127 aa17.21■□□□□ 0.35
LRRFIP1-204ENST00000392000 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.34
LRRFIP1-204ENST00000392000 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
LRRFIP1-204ENST00000392000 PEAK1Q9H792 1746 aa17.2■□□□□ 0.34
LRRFIP1-204ENST00000392000 ATP5J2-PTCD1G3V325 749 aa17.2■□□□□ 0.34
LRRFIP1-204ENST00000392000 PTCD1O75127 700 aaKnown RBP17.2■□□□□ 0.34
LRRFIP1-204ENST00000392000 SEC62Q99442 399 aaKnown RBP17.2■□□□□ 0.34
LRRFIP1-204ENST00000392000 PHF8Q9UPP1 1060 aa17.2■□□□□ 0.34
LRRFIP1-204ENST00000392000 BIN1O00499 593 aa17.2■□□□□ 0.34
LRRFIP1-204ENST00000392000 POLA2Q14181 598 aa17.2■□□□□ 0.34
LRRFIP1-204ENST00000392000 PTPN21Q16825 1174 aa17.2■□□□□ 0.34
LRRFIP1-204ENST00000392000 ZRSR1Q15695 479 aaKnown RBP17.19■□□□□ 0.34
LRRFIP1-204ENST00000392000 FAM177A1Q8N128 213 aaPredicted RBP17.19■□□□□ 0.34
LRRFIP1-204ENST00000392000 RIMBP3CA6NJZ7 1639 aa17.19■□□□□ 0.34
LRRFIP1-204ENST00000392000 RIMBP3BA6NNM3 1639 aa17.19■□□□□ 0.34
LRRFIP1-204ENST00000392000 RIMBP3Q9UFD9 1639 aa17.19■□□□□ 0.34
LRRFIP1-204ENST00000392000 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
LRRFIP1-204ENST00000392000 TMX1Q9H3N1 280 aa17.19■□□□□ 0.34
LRRFIP1-204ENST00000392000 USP31Q70CQ4 1352 aa17.18■□□□□ 0.34
LRRFIP1-204ENST00000392000 ZNF589Q86UQ0 364 aaPredicted RBP17.18■□□□□ 0.34
LRRFIP1-204ENST00000392000 CACTINQ8WUQ7 758 aaKnown RBP17.18■□□□□ 0.34
LRRFIP1-204ENST00000392000 BRF1Q92994 677 aa17.18■□□□□ 0.34
LRRFIP1-204ENST00000392000 ZNF330Q9Y3S2 320 aaPredicted RBP17.18■□□□□ 0.34
LRRFIP1-204ENST00000392000 ZBTB22O15209 634 aa17.18■□□□□ 0.34
LRRFIP1-204ENST00000392000 ST3GAL1Q11201 340 aa17.18■□□□□ 0.34
LRRFIP1-204ENST00000392000 ORAI2Q96SN7 254 aa17.18■□□□□ 0.34
LRRFIP1-204ENST00000392000 SASH1O94885 1247 aa17.17■□□□□ 0.34
LRRFIP1-204ENST00000392000 USP27XA6NNY8 438 aa17.17■□□□□ 0.34
LRRFIP1-204ENST00000392000 DMTNQ08495 405 aa17.17■□□□□ 0.34
LRRFIP1-204ENST00000392000 CCDC144BQ3MJ40 725 aa17.17■□□□□ 0.34
LRRFIP1-204ENST00000392000 CCDC144CPQ8IYA2 1237 aa17.17■□□□□ 0.34
LRRFIP1-204ENST00000392000 MYD88Q99836 296 aa17.17■□□□□ 0.34
LRRFIP1-204ENST00000392000 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
LRRFIP1-204ENST00000392000 ME1P48163 572 aa17.16■□□□□ 0.34
LRRFIP1-204ENST00000392000 HSP90AA4PQ58FG1 418 aa17.16■□□□□ 0.34
LRRFIP1-204ENST00000392000 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
LRRFIP1-204ENST00000392000 SDF4Q9BRK5 362 aa17.16■□□□□ 0.34
LRRFIP1-204ENST00000392000 CCDC171Q6TFL3 1326 aa17.16■□□□□ 0.34
LRRFIP1-204ENST00000392000 KDRP35968 1356 aa17.16■□□□□ 0.34
LRRFIP1-204ENST00000392000 SLC27A2O14975 620 aa17.15■□□□□ 0.34
LRRFIP1-204ENST00000392000 HSP90AB4PQ58FF6 505 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms