RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 ZNF521Q96K83 1311 aa16.9■□□□□ 0.3
MRPL55-219ENST00000391867 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.3
MRPL55-219ENST00000391867 PRPF40BQ6NWY9 871 aaKnown RBP16.89■□□□□ 0.29
MRPL55-219ENST00000391867 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
MRPL55-219ENST00000391867 ZNF526Q8TF50 670 aaPredicted RBP16.89■□□□□ 0.29
MRPL55-219ENST00000391867 STK31Q9BXU1 1019 aa16.89■□□□□ 0.29
MRPL55-219ENST00000391867 PDZRN3Q9UPQ7 1066 aa16.89■□□□□ 0.29
MRPL55-219ENST00000391867 ARFGEF2Q9Y6D5 1785 aa16.89■□□□□ 0.29
MRPL55-219ENST00000391867 SLX4Q8IY92 1834 aa16.89■□□□□ 0.29
MRPL55-219ENST00000391867 NPR1P16066 1061 aa16.88■□□□□ 0.29
MRPL55-219ENST00000391867 G2E3Q7L622 706 aa16.88■□□□□ 0.29
MRPL55-219ENST00000391867 CNKSR1Q969H4 720 aa16.88■□□□□ 0.29
MRPL55-219ENST00000391867 MYH16Q9H6N6 1097 aa16.88■□□□□ 0.29
MRPL55-219ENST00000391867 ADCY9O60503 1353 aa16.88■□□□□ 0.29
MRPL55-219ENST00000391867 KLRG2A4D1S0 409 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-219ENST00000391867 C9orf131Q5VYM1 1079 aa16.87■□□□□ 0.29
MRPL55-219ENST00000391867 OLFM4Q6UX06 510 aa16.87■□□□□ 0.29
MRPL55-219ENST00000391867 TRMT112Q9UI30 125 aaKnown RBP16.87■□□□□ 0.29
MRPL55-219ENST00000391867 VAMP4O75379 141 aa16.86■□□□□ 0.29
MRPL55-219ENST00000391867 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
MRPL55-219ENST00000391867 HCLS1P14317 486 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-219ENST00000391867 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-219ENST00000391867 MYD88Q99836 296 aa16.86■□□□□ 0.29
MRPL55-219ENST00000391867 ISCA1Q9BUE6 129 aa16.86■□□□□ 0.29
MRPL55-219ENST00000391867 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
MRPL55-219ENST00000391867 NFKBIEO00221 500 aa16.85■□□□□ 0.29
MRPL55-219ENST00000391867 PRELPP51888 382 aa16.85■□□□□ 0.29
MRPL55-219ENST00000391867 CRY2Q49AN0 593 aa16.85■□□□□ 0.29
MRPL55-219ENST00000391867 SLC51AQ86UW1 340 aa16.85■□□□□ 0.29
MRPL55-219ENST00000391867 RPGRQ92834 1020 aaKnown RBP16.85■□□□□ 0.29
MRPL55-219ENST00000391867 MAP3K2Q9Y2U5 619 aa16.85■□□□□ 0.29
MRPL55-219ENST00000391867 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
MRPL55-219ENST00000391867 FAM89AQ96GI7 184 aa16.84■□□□□ 0.29
MRPL55-219ENST00000391867 CDCA7LQ96GN5 454 aa16.84■□□□□ 0.29
MRPL55-219ENST00000391867 CHMP4AQ9BY43 222 aa16.84■□□□□ 0.29
MRPL55-219ENST00000391867 RIC1Q4ADV7 1423 aa16.84■□□□□ 0.29
MRPL55-219ENST00000391867 PI4KAP2A4QPH2 592 aa16.83■□□□□ 0.28
MRPL55-219ENST00000391867 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.28
MRPL55-219ENST00000391867 PI4KAP1Q8N8J0 262 aa16.83■□□□□ 0.28
MRPL55-219ENST00000391867 JARID2Q92833 1246 aaPredicted RBP16.83■□□□□ 0.28
MRPL55-219ENST00000391867 NLRP3Q96P20 1036 aa16.83■□□□□ 0.28
MRPL55-219ENST00000391867 FLIIQ13045 1269 aa16.82■□□□□ 0.28
MRPL55-219ENST00000391867 SLC10A5Q5PT55 438 aa16.82■□□□□ 0.28
MRPL55-219ENST00000391867 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
MRPL55-219ENST00000391867 C7orf43Q8WVR3 580 aa16.82■□□□□ 0.28
MRPL55-219ENST00000391867 METTL22Q9BUU2 404 aaPredicted RBP16.82■□□□□ 0.28
MRPL55-219ENST00000391867 SBF1O95248 1867 aa16.82■□□□□ 0.28
MRPL55-219ENST00000391867 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
MRPL55-219ENST00000391867 RBM17Q96I25 401 aaKnown RBP16.81■□□□□ 0.28
MRPL55-219ENST00000391867 LAMB2P55268 1798 aa16.81■□□□□ 0.28
MRPL55-219ENST00000391867 DDX60Q8IY21 1712 aaKnown RBP16.8■□□□□ 0.28
MRPL55-219ENST00000391867 E9PSI1 815 aa16.8■□□□□ 0.28
MRPL55-219ENST00000391867 LMNB1P20700 586 aa16.8■□□□□ 0.28
MRPL55-219ENST00000391867 ALDH1B1P30837 517 aa16.8■□□□□ 0.28
MRPL55-219ENST00000391867 HOXA10P31260 410 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-219ENST00000391867 SLFN5Q08AF3 891 aa16.8■□□□□ 0.28
MRPL55-219ENST00000391867 FKBP5Q13451 457 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-219ENST00000391867 CCDC93Q567U6 631 aa16.8■□□□□ 0.28
MRPL55-219ENST00000391867 TAOK3Q9H2K8 898 aa16.8■□□□□ 0.28
MRPL55-219ENST00000391867 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-219ENST00000391867 FER1L6Q2WGJ9 1857 aa16.8■□□□□ 0.28
MRPL55-219ENST00000391867 ABCC4O15439 1325 aa16.79■□□□□ 0.28
MRPL55-219ENST00000391867 IGKV5-2P06315 115 aa16.79■□□□□ 0.28
MRPL55-219ENST00000391867 TRIM28Q13263 835 aaKnown RBP16.79■□□□□ 0.28
MRPL55-219ENST00000391867 CWF19L2Q2TBE0 894 aaKnown RBP16.79■□□□□ 0.28
MRPL55-219ENST00000391867 CCDC88AQ3V6T2 1871 aa16.78■□□□□ 0.28
MRPL55-219ENST00000391867 IRS4O14654 1257 aaPredicted RBP16.78■□□□□ 0.28
MRPL55-219ENST00000391867 PPEF1O14829 653 aaPredicted RBP16.78■□□□□ 0.28
MRPL55-219ENST00000391867 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
MRPL55-219ENST00000391867 ZBTB38Q8NAP3 1195 aaPredicted RBP16.78■□□□□ 0.28
MRPL55-219ENST00000391867 CRAMP1Q96RY5 1269 aa16.78■□□□□ 0.28
MRPL55-219ENST00000391867 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
MRPL55-219ENST00000391867 F6X3S4 739 aa16.77■□□□□ 0.28
MRPL55-219ENST00000391867 NEXNQ0ZGT2 675 aa16.77■□□□□ 0.28
MRPL55-219ENST00000391867 CCDC191Q8NCU4 936 aa16.77■□□□□ 0.28
MRPL55-219ENST00000391867 ZNF277Q9NRM2 450 aaPredicted RBP16.77■□□□□ 0.28
MRPL55-219ENST00000391867 TIAM2Q8IVF5 1701 aa16.76■□□□□ 0.27
MRPL55-219ENST00000391867 TAF1P21675 1872 aa16.76■□□□□ 0.27
MRPL55-219ENST00000391867 DNAAF4Q8WXU2 420 aa16.76■□□□□ 0.27
MRPL55-219ENST00000391867 COL4A1P02462 1669 aa16.75■□□□□ 0.27
MRPL55-219ENST00000391867 LTBP3Q9NS15 1303 aa16.75■□□□□ 0.27
MRPL55-219ENST00000391867 NEURL1BA8MQ27 555 aa16.75■□□□□ 0.27
MRPL55-219ENST00000391867 PCCAP05165 728 aaPredicted RBP16.75■□□□□ 0.27
MRPL55-219ENST00000391867 FKBP4Q02790 459 aaKnown RBP eCLIP16.75■□□□□ 0.27
MRPL55-219ENST00000391867 DDX46Q7L014 1031 aaKnown RBP16.75■□□□□ 0.27
MRPL55-219ENST00000391867 CCDC85AQ96PX6 553 aaPredicted RBP16.75■□□□□ 0.27
MRPL55-219ENST00000391867 BCL2L13Q9BXK5 485 aa16.75■□□□□ 0.27
MRPL55-219ENST00000391867 NMRK2Q9NPI5 230 aa16.75■□□□□ 0.27
MRPL55-219ENST00000391867 SNED1Q8TER0 1413 aa16.74■□□□□ 0.27
MRPL55-219ENST00000391867 RTKN2Q8IZC4 609 aa16.74■□□□□ 0.27
MRPL55-219ENST00000391867 CACNA1FO60840 1977 aa16.74■□□□□ 0.27
MRPL55-219ENST00000391867 HNRNPUQ00839 825 aaKnown RBP eCLIP16.73■□□□□ 0.27
MRPL55-219ENST00000391867 GRAPQ13588 217 aa16.73■□□□□ 0.27
MRPL55-219ENST00000391867 UBE3BQ7Z3V4 1068 aa16.73■□□□□ 0.27
MRPL55-219ENST00000391867 GRAPLQ8TC17 118 aaPredicted RBP16.73■□□□□ 0.27
MRPL55-219ENST00000391867 SF3B3Q15393 1217 aaKnown RBP16.72■□□□□ 0.27
MRPL55-219ENST00000391867 TRMT2AQ8IZ69 625 aaKnown RBP16.72■□□□□ 0.27
MRPL55-219ENST00000391867 SSH1Q8WYL5 1049 aa16.72■□□□□ 0.27
MRPL55-219ENST00000391867 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
MRPL55-219ENST00000391867 ATP6V0A2Q9Y487 856 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms