RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 RIC1Q4ADV7 1423 aa19.2■□□□□ 0.66
IGHV3-53-201ENST00000390627 ATP5J2-PTCD1G3V325 749 aa19.2■□□□□ 0.66
IGHV3-53-201ENST00000390627 NEXNQ0ZGT2 675 aa19.2■□□□□ 0.66
IGHV3-53-201ENST00000390627 TRIM28Q13263 835 aaKnown RBP19.2■□□□□ 0.66
IGHV3-53-201ENST00000390627 MYD88Q99836 296 aa19.2■□□□□ 0.66
IGHV3-53-201ENST00000390627 DLEC1Q9Y238 1755 aa19.19■□□□□ 0.66
IGHV3-53-201ENST00000390627 KCNA3P22001 575 aa19.19■□□□□ 0.66
IGHV3-53-201ENST00000390627 ALDH1L2Q3SY69 923 aa19.19■□□□□ 0.66
IGHV3-53-201ENST00000390627 ERFEQ4G0M1 354 aa19.19■□□□□ 0.66
IGHV3-53-201ENST00000390627 TRMT112Q9UI30 125 aaKnown RBP19.19■□□□□ 0.66
IGHV3-53-201ENST00000390627 WWC3Q9ULE0 1092 aa19.19■□□□□ 0.66
IGHV3-53-201ENST00000390627 BRCA1P38398 1863 aaKnown RBP19.19■□□□□ 0.66
IGHV3-53-201ENST00000390627 GRIN3BO60391 1043 aa19.18■□□□□ 0.66
IGHV3-53-201ENST00000390627 YBX3P16989 372 aaKnown RBP eCLIP19.18■□□□□ 0.66
IGHV3-53-201ENST00000390627 CCDC191Q8NCU4 936 aa19.18■□□□□ 0.66
IGHV3-53-201ENST00000390627 BCS1LQ9Y276 419 aa19.18■□□□□ 0.66
IGHV3-53-201ENST00000390627 SH3TC1Q8TE82 1336 aa19.18■□□□□ 0.66
IGHV3-53-201ENST00000390627 COL11A2P13942 1736 aaPredicted RBP19.17■□□□□ 0.66
IGHV3-53-201ENST00000390627 DALRD3Q5D0E6 543 aaKnown RBP19.17■□□□□ 0.66
IGHV3-53-201ENST00000390627 MRPL50Q8N5N7 158 aaKnown RBP19.17■□□□□ 0.66
IGHV3-53-201ENST00000390627 DNAAF4Q8WXU2 420 aa19.17■□□□□ 0.66
IGHV3-53-201ENST00000390627 SSH1Q8WYL5 1049 aa19.17■□□□□ 0.66
IGHV3-53-201ENST00000390627 KLRG2A4D1S0 409 aaPredicted RBP19.16■□□□□ 0.66
IGHV3-53-201ENST00000390627 SRGNP10124 158 aa19.16■□□□□ 0.66
IGHV3-53-201ENST00000390627 STYK1Q6J9G0 422 aa19.16■□□□□ 0.66
IGHV3-53-201ENST00000390627 ZNF622Q969S3 477 aaKnown RBP eCLIP19.16■□□□□ 0.66
IGHV3-53-201ENST00000390627 MASTLQ96GX5 879 aa19.16■□□□□ 0.66
IGHV3-53-201ENST00000390627 SMC4Q9NTJ3 1288 aa19.16■□□□□ 0.66
IGHV3-53-201ENST00000390627 CWC25Q9NXE8 425 aaPredicted RBP19.16■□□□□ 0.66
IGHV3-53-201ENST00000390627 TNRC6CQ9HCJ0 1690 aaKnown RBP19.15■□□□□ 0.66
IGHV3-53-201ENST00000390627 NPR1P16066 1061 aa19.15■□□□□ 0.66
IGHV3-53-201ENST00000390627 SLC10A5Q5PT55 438 aa19.15■□□□□ 0.66
IGHV3-53-201ENST00000390627 TTLL6Q8N841 843 aa19.15■□□□□ 0.66
IGHV3-53-201ENST00000390627 BCL2L13Q9BXK5 485 aa19.15■□□□□ 0.66
IGHV3-53-201ENST00000390627 PTPRCP08575 1304 aa19.15■□□□□ 0.66
IGHV3-53-201ENST00000390627 ZBTB38Q8NAP3 1195 aaPredicted RBP19.14■□□□□ 0.65
IGHV3-53-201ENST00000390627 CNKSR1Q969H4 720 aa19.14■□□□□ 0.65
IGHV3-53-201ENST00000390627 NLRP3Q96P20 1036 aa19.14■□□□□ 0.65
IGHV3-53-201ENST00000390627 IGKV5-2P06315 115 aa19.13■□□□□ 0.65
IGHV3-53-201ENST00000390627 HSP90B1P14625 803 aaKnown RBP19.13■□□□□ 0.65
IGHV3-53-201ENST00000390627 CRY2Q49AN0 593 aa19.13■□□□□ 0.65
IGHV3-53-201ENST00000390627 FAM89AQ96GI7 184 aa19.13■□□□□ 0.65
IGHV3-53-201ENST00000390627 ARFGEF1Q9Y6D6 1849 aa19.12■□□□□ 0.65
IGHV3-53-201ENST00000390627 NEURL1BA8MQ27 555 aa19.12■□□□□ 0.65
IGHV3-53-201ENST00000390627 F6X3S4 739 aa19.12■□□□□ 0.65
IGHV3-53-201ENST00000390627 PCCAP05165 728 aaPredicted RBP19.12■□□□□ 0.65
IGHV3-53-201ENST00000390627 LINS1Q8NG48 757 aa19.12■□□□□ 0.65
IGHV3-53-201ENST00000390627 RPGRQ92834 1020 aaKnown RBP19.12■□□□□ 0.65
IGHV3-53-201ENST00000390627 HCLS1P14317 486 aaPredicted RBP19.11■□□□□ 0.65
IGHV3-53-201ENST00000390627 RARSP54136 660 aaKnown RBP19.11■□□□□ 0.65
IGHV3-53-201ENST00000390627 BRPF1P55201 1214 aaPredicted RBP19.11■□□□□ 0.65
IGHV3-53-201ENST00000390627 CWF19L2Q2TBE0 894 aaKnown RBP19.11■□□□□ 0.65
IGHV3-53-201ENST00000390627 GOLGB1Q14789 3259 aaKnown RBP19.1■□□□□ 0.65
IGHV3-53-201ENST00000390627 IRS4O14654 1257 aaPredicted RBP19.1■□□□□ 0.65
IGHV3-53-201ENST00000390627 ALDH1B1P30837 517 aa19.1■□□□□ 0.65
IGHV3-53-201ENST00000390627 RTL5Q5HYW3 569 aaPredicted RBP19.1■□□□□ 0.65
IGHV3-53-201ENST00000390627 SYNE4Q8N205 404 aa19.1■□□□□ 0.65
IGHV3-53-201ENST00000390627 LAMB2P55268 1798 aa19.09■□□□□ 0.65
IGHV3-53-201ENST00000390627 KIF16BQ96L93 1317 aa19.09■□□□□ 0.65
IGHV3-53-201ENST00000390627 PRPF40BQ6NWY9 871 aaKnown RBP19.09■□□□□ 0.65
IGHV3-53-201ENST00000390627 SLC4A10Q6U841 1118 aa19.09■□□□□ 0.65
IGHV3-53-201ENST00000390627 RBM17Q96I25 401 aaKnown RBP19.09■□□□□ 0.65
IGHV3-53-201ENST00000390627 DDX60Q8IY21 1712 aaKnown RBP19.08■□□□□ 0.65
IGHV3-53-201ENST00000390627 CDHR2Q9BYE9 1310 aa19.08■□□□□ 0.65
IGHV3-53-201ENST00000390627 HOXA10P31260 410 aaPredicted RBP19.08■□□□□ 0.64
IGHV3-53-201ENST00000390627 GCKRQ14397 625 aa19.08■□□□□ 0.64
IGHV3-53-201ENST00000390627 BEND3Q5T5X7 828 aa19.08■□□□□ 0.64
IGHV3-53-201ENST00000390627 C3orf67Q6ZVT6 689 aa19.08■□□□□ 0.64
IGHV3-53-201ENST00000390627 UTRNP46939 3433 aa19.08■□□□□ 0.64
IGHV3-53-201ENST00000390627 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
IGHV3-53-201ENST00000390627 CRAMP1Q96RY5 1269 aa19.07■□□□□ 0.64
IGHV3-53-201ENST00000390627 SRCIN1Q9C0H9 1055 aa19.07■□□□□ 0.64
IGHV3-53-201ENST00000390627 CACNA1SQ13698 1873 aa19.06■□□□□ 0.64
IGHV3-53-201ENST00000390627 PDE8AO60658 829 aa19.06■□□□□ 0.64
IGHV3-53-201ENST00000390627 ALDH1L1O75891 902 aa19.06■□□□□ 0.64
IGHV3-53-201ENST00000390627 ARHGAP27Q6ZUM4 889 aa19.06■□□□□ 0.64
IGHV3-53-201ENST00000390627 NOB1Q9ULX3 412 aaKnown RBP19.06■□□□□ 0.64
IGHV3-53-201ENST00000390627 SLX4Q8IY92 1834 aa19.05■□□□□ 0.64
IGHV3-53-201ENST00000390627 H7C1W4 665 aa19.05■□□□□ 0.64
IGHV3-53-201ENST00000390627 SF3B3Q15393 1217 aaKnown RBP19.05■□□□□ 0.64
IGHV3-53-201ENST00000390627 DDX46Q7L014 1031 aaKnown RBP19.05■□□□□ 0.64
IGHV3-53-201ENST00000390627 UBE3BQ7Z3V4 1068 aa19.05■□□□□ 0.64
IGHV3-53-201ENST00000390627 API5Q9BZZ5 524 aaKnown RBP19.05■□□□□ 0.64
IGHV3-53-201ENST00000390627 CHD4Q14839 1912 aa19.05■□□□□ 0.64
IGHV3-53-201ENST00000390627 C21orf2O43822 256 aa19.04■□□□□ 0.64
IGHV3-53-201ENST00000390627 JARID2Q92833 1246 aaPredicted RBP19.04■□□□□ 0.64
IGHV3-53-201ENST00000390627 ABCC4O15439 1325 aa19.03■□□□□ 0.64
IGHV3-53-201ENST00000390627 IPO8O15397 1037 aaKnown RBP19.03■□□□□ 0.64
IGHV3-53-201ENST00000390627 CCDC152Q4G0S7 254 aa19.03■□□□□ 0.64
IGHV3-53-201ENST00000390627 ARHGAP45Q92619 1136 aa19.03■□□□□ 0.64
IGHV3-53-201ENST00000390627 ZNF219Q9P2Y4 722 aaPredicted RBP19.03■□□□□ 0.64
IGHV3-53-201ENST00000390627 GRM8O00222 908 aa19.02■□□□□ 0.64
IGHV3-53-201ENST00000390627 GRAPQ13588 217 aa19.02■□□□□ 0.64
IGHV3-53-201ENST00000390627 CCDC93Q567U6 631 aa19.02■□□□□ 0.64
IGHV3-53-201ENST00000390627 GRAPLQ8TC17 118 aaPredicted RBP19.02■□□□□ 0.64
IGHV3-53-201ENST00000390627 C9orf78Q9NZ63 289 aaPredicted RBP19.02■□□□□ 0.64
IGHV3-53-201ENST00000390627 PPEF1O14829 653 aaPredicted RBP19.01■□□□□ 0.63
IGHV3-53-201ENST00000390627 BCAR3O75815 825 aa19.01■□□□□ 0.63
IGHV3-53-201ENST00000390627 CASP7P55210 303 aa19.01■□□□□ 0.63
IGHV3-53-201ENST00000390627 CTSWP56202 376 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms