RNA–Protein interactions for RNA: ENST00000390624.3

IGHV3-48-201, Transcript of immunoglobulin heavy variable 3-48, humanhuman

APPRIS P1 BASIC

Gene IGHV3-48, Length 432 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-48-201ENST00000390624 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
IGHV3-48-201ENST00000390624 GPBP1L1Q9HC44 474 aaPredicted RBP18.26■□□□□ 0.51
IGHV3-48-201ENST00000390624 ABCC12Q96J65 1359 aa18.26■□□□□ 0.51
IGHV3-48-201ENST00000390624 RNF123Q5XPI4 1314 aa18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 CACNA1SQ13698 1873 aa18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 RASSF7Q02833 373 aa18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 SOGA3Q5TF21 947 aa18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 RIC3Q7Z5B4 369 aa18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 ZNF526Q8TF50 670 aaPredicted RBP18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 NLRP3Q96P20 1036 aa18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 RNF181Q9P0P0 153 aa18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 TRMT112Q9UI30 125 aaKnown RBP18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 ARFGEF2Q9Y6D5 1785 aa18.25■□□□□ 0.51
IGHV3-48-201ENST00000390624 FANCIQ9NVI1 1328 aa18.24■□□□□ 0.51
IGHV3-48-201ENST00000390624 CCER2I3L3R5 266 aa18.24■□□□□ 0.51
IGHV3-48-201ENST00000390624 LMNB1P20700 586 aa18.24■□□□□ 0.51
IGHV3-48-201ENST00000390624 GOLGA2Q08379 1002 aa18.24■□□□□ 0.51
IGHV3-48-201ENST00000390624 C7orf43Q8WVR3 580 aa18.24■□□□□ 0.51
IGHV3-48-201ENST00000390624 RPGRQ92834 1020 aaKnown RBP18.24■□□□□ 0.51
IGHV3-48-201ENST00000390624 STK31Q9BXU1 1019 aa18.24■□□□□ 0.51
IGHV3-48-201ENST00000390624 NFKBIEO00221 500 aa18.23■□□□□ 0.51
IGHV3-48-201ENST00000390624 DDX58O95786 925 aaKnown RBP18.23■□□□□ 0.51
IGHV3-48-201ENST00000390624 HOXA10P31260 410 aaPredicted RBP18.23■□□□□ 0.51
IGHV3-48-201ENST00000390624 TRIM28Q13263 835 aaKnown RBP18.23■□□□□ 0.51
IGHV3-48-201ENST00000390624 ISCA1Q9BUE6 129 aa18.23■□□□□ 0.51
IGHV3-48-201ENST00000390624 TNRC6CQ9HCJ0 1690 aaKnown RBP18.22■□□□□ 0.51
IGHV3-48-201ENST00000390624 ATP5J2-PTCD1G3V325 749 aa18.22■□□□□ 0.51
IGHV3-48-201ENST00000390624 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
IGHV3-48-201ENST00000390624 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
IGHV3-48-201ENST00000390624 FER1L6Q2WGJ9 1857 aa18.22■□□□□ 0.51
IGHV3-48-201ENST00000390624 SH3TC1Q8TE82 1336 aa18.22■□□□□ 0.51
IGHV3-48-201ENST00000390624 CCDC88AQ3V6T2 1871 aa18.21■□□□□ 0.51
IGHV3-48-201ENST00000390624 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
IGHV3-48-201ENST00000390624 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
IGHV3-48-201ENST00000390624 VAMP4O75379 141 aa18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 SLC4A2P04920 1241 aa18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 HCLS1P14317 486 aaPredicted RBP18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 PRELPP51888 382 aa18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 SYNE4Q8N205 404 aa18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 CRAMP1Q96RY5 1269 aa18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 TAOK3Q9H2K8 898 aa18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 LTBP3Q9NS15 1303 aa18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 ZC3H4Q9UPT8 1303 aaKnown RBP18.2■□□□□ 0.5
IGHV3-48-201ENST00000390624 TCERG1O14776 1098 aaKnown RBP18.19■□□□□ 0.5
IGHV3-48-201ENST00000390624 C3orf67Q6ZVT6 689 aa18.19■□□□□ 0.5
IGHV3-48-201ENST00000390624 RTKN2Q8IZC4 609 aa18.19■□□□□ 0.5
IGHV3-48-201ENST00000390624 CC2D2BQ6DHV5 1058 aa18.18■□□□□ 0.5
IGHV3-48-201ENST00000390624 KSR2Q6VAB6 950 aa18.18■□□□□ 0.5
IGHV3-48-201ENST00000390624 ZNF428Q96B54 188 aa18.18■□□□□ 0.5
IGHV3-48-201ENST00000390624 FAM89AQ96GI7 184 aa18.18■□□□□ 0.5
IGHV3-48-201ENST00000390624 MYD88Q99836 296 aa18.18■□□□□ 0.5
IGHV3-48-201ENST00000390624 METTL22Q9BUU2 404 aaPredicted RBP18.18■□□□□ 0.5
IGHV3-48-201ENST00000390624 ZNF521Q96K83 1311 aa18.18■□□□□ 0.5
IGHV3-48-201ENST00000390624 CCDC191Q8NCU4 936 aa18.17■□□□□ 0.5
IGHV3-48-201ENST00000390624 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
IGHV3-48-201ENST00000390624 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
IGHV3-48-201ENST00000390624 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
IGHV3-48-201ENST00000390624 CEP350Q5VT06 3117 aa18.16■□□□□ 0.5
IGHV3-48-201ENST00000390624 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
IGHV3-48-201ENST00000390624 GRIPAP1Q4V328 841 aa18.16■□□□□ 0.5
IGHV3-48-201ENST00000390624 DIEXFQ68CQ4 756 aaKnown RBP18.16■□□□□ 0.5
IGHV3-48-201ENST00000390624 OLFM4Q6UX06 510 aa18.16■□□□□ 0.5
IGHV3-48-201ENST00000390624 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
IGHV3-48-201ENST00000390624 ZBTB38Q8NAP3 1195 aaPredicted RBP18.16■□□□□ 0.5
IGHV3-48-201ENST00000390624 FKBP4Q02790 459 aaKnown RBP eCLIP18.15■□□□□ 0.5
IGHV3-48-201ENST00000390624 G2E3Q7L622 706 aa18.15■□□□□ 0.5
IGHV3-48-201ENST00000390624 CWC25Q9NXE8 425 aaPredicted RBP18.15■□□□□ 0.5
IGHV3-48-201ENST00000390624 DICER1Q9UPY3 1922 aaKnown RBP18.15■□□□□ 0.5
IGHV3-48-201ENST00000390624 LAMB2P55268 1798 aa18.14■□□□□ 0.5
IGHV3-48-201ENST00000390624 PPEF1O14829 653 aaPredicted RBP18.14■□□□□ 0.49
IGHV3-48-201ENST00000390624 BBOX1O75936 387 aa18.14■□□□□ 0.49
IGHV3-48-201ENST00000390624 HSP90B1P14625 803 aaKnown RBP18.14■□□□□ 0.49
IGHV3-48-201ENST00000390624 NEXNQ0ZGT2 675 aa18.14■□□□□ 0.49
IGHV3-48-201ENST00000390624 RTL5Q5HYW3 569 aaPredicted RBP18.14■□□□□ 0.49
IGHV3-48-201ENST00000390624 DDX46Q7L014 1031 aaKnown RBP18.14■□□□□ 0.49
IGHV3-48-201ENST00000390624 TMX4Q9H1E5 349 aaPredicted RBP18.14■□□□□ 0.49
IGHV3-48-201ENST00000390624 GLTPD2A6NH11 291 aa18.13■□□□□ 0.49
IGHV3-48-201ENST00000390624 IRS4O14654 1257 aaPredicted RBP18.13■□□□□ 0.49
IGHV3-48-201ENST00000390624 KIF3CO14782 793 aa18.13■□□□□ 0.49
IGHV3-48-201ENST00000390624 FLIIQ13045 1269 aa18.13■□□□□ 0.49
IGHV3-48-201ENST00000390624 SF3B3Q15393 1217 aaKnown RBP18.13■□□□□ 0.49
IGHV3-48-201ENST00000390624 DPY19L2Q6NUT2 758 aa18.13■□□□□ 0.49
IGHV3-48-201ENST00000390624 NMRK2Q9NPI5 230 aa18.13■□□□□ 0.49
IGHV3-48-201ENST00000390624 ABCC4O15439 1325 aa18.13■□□□□ 0.49
IGHV3-48-201ENST00000390624 DDX60Q8IY21 1712 aaKnown RBP18.12■□□□□ 0.49
IGHV3-48-201ENST00000390624 E9PSI1 815 aa18.12■□□□□ 0.49
IGHV3-48-201ENST00000390624 PCCAP05165 728 aaPredicted RBP18.12■□□□□ 0.49
IGHV3-48-201ENST00000390624 PSMD1Q99460 953 aa18.12■□□□□ 0.49
IGHV3-48-201ENST00000390624 ATP6V0A2Q9Y487 856 aa18.12■□□□□ 0.49
IGHV3-48-201ENST00000390624 IGKV5-2P06315 115 aa18.11■□□□□ 0.49
IGHV3-48-201ENST00000390624 FKBP5Q13451 457 aaPredicted RBP18.11■□□□□ 0.49
IGHV3-48-201ENST00000390624 RRAGCQ9HB90 399 aa18.11■□□□□ 0.49
IGHV3-48-201ENST00000390624 ZNF277Q9NRM2 450 aaPredicted RBP18.11■□□□□ 0.49
IGHV3-48-201ENST00000390624 TIAM2Q8IVF5 1701 aa18.11■□□□□ 0.49
IGHV3-48-201ENST00000390624 GRAPQ13588 217 aa18.1■□□□□ 0.49
IGHV3-48-201ENST00000390624 SP8Q8IXZ3 490 aa18.1■□□□□ 0.49
IGHV3-48-201ENST00000390624 MIER1Q8N108 512 aa18.1■□□□□ 0.49
IGHV3-48-201ENST00000390624 GRAPLQ8TC17 118 aaPredicted RBP18.1■□□□□ 0.49
IGHV3-48-201ENST00000390624 SNED1Q8TER0 1413 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms