RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 USP17L2Q6R6M4 530 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 USP17L1Q7RTZ2 530 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 NME9Q86XW9 330 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 PNMA1Q8ND90 353 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 EVA1BQ9NVM1 165 aa9.77□□□□□ -0.85
TRBV28-201ENST00000390400 SOS2Q07890 1332 aaPredicted RBP9.77□□□□□ -0.85
TRBV28-201ENST00000390400 USP17L5A8MUK1 530 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 TLL1O43897 1013 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 NR1I2O75469 434 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 CRTC2Q53ET0 693 aaPredicted RBP9.76□□□□□ -0.85
TRBV28-201ENST00000390400 PTCRAQ6ISU1 281 aaPredicted RBP9.76□□□□□ -0.85
TRBV28-201ENST00000390400 WNT2BQ93097 391 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 PRR14Q9BWN1 585 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 CEP126Q9P2H0 1117 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 PIK3C2AO00443 1686 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 ALS2Q96Q42 1657 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 ANKRD26Q9UPS8 1709 aa9.76□□□□□ -0.85
TRBV28-201ENST00000390400 ARHGEF10O15013 1369 aa9.75□□□□□ -0.85
TRBV28-201ENST00000390400 FYB1O15117 783 aa9.75□□□□□ -0.85
TRBV28-201ENST00000390400 MMP16P51512 607 aa9.75□□□□□ -0.85
TRBV28-201ENST00000390400 COPS2P61201 443 aa9.75□□□□□ -0.85
TRBV28-201ENST00000390400 KCNH2Q12809 1159 aa9.75□□□□□ -0.85
TRBV28-201ENST00000390400 MSS51Q4VC12 460 aa9.75□□□□□ -0.85
TRBV28-201ENST00000390400 CC2D1BQ5T0F9 858 aaKnown RBP9.75□□□□□ -0.85
TRBV28-201ENST00000390400 ABTB2Q8N961 1025 aa9.75□□□□□ -0.85
TRBV28-201ENST00000390400 GGNBP2Q9H3C7 697 aa9.75□□□□□ -0.85
TRBV28-201ENST00000390400 SPATA31A3Q5VYP0 1347 aa9.75□□□□□ -0.85
TRBV28-201ENST00000390400 COL16A1Q07092 1604 aaPredicted RBP9.74□□□□□ -0.85
TRBV28-201ENST00000390400 CCNYL3P0C7X3 344 aa9.74□□□□□ -0.85
TRBV28-201ENST00000390400 CNGB1Q14028 1251 aaPredicted RBP9.74□□□□□ -0.85
TRBV28-201ENST00000390400 ELOAQ14241 798 aaKnown RBP9.74□□□□□ -0.85
TRBV28-201ENST00000390400 PLEKHM2Q8IWE5 1019 aa9.74□□□□□ -0.85
TRBV28-201ENST00000390400 NFATC2IPQ8NCF5 419 aa9.74□□□□□ -0.85
TRBV28-201ENST00000390400 LRRC59Q96AG4 307 aaKnown RBP9.74□□□□□ -0.85
TRBV28-201ENST00000390400 COG3Q96JB2 828 aa9.74□□□□□ -0.85
TRBV28-201ENST00000390400 NUDT12Q9BQG2 462 aa9.74□□□□□ -0.85
TRBV28-201ENST00000390400 ZC3H4Q9UPT8 1303 aaKnown RBP9.74□□□□□ -0.85
TRBV28-201ENST00000390400 USP31Q70CQ4 1352 aa9.74□□□□□ -0.85
TRBV28-201ENST00000390400 USP54Q70EL1 1684 aa9.74□□□□□ -0.85
TRBV28-201ENST00000390400 GOLGA8CPA6NN73 597 aa9.73□□□□□ -0.85
TRBV28-201ENST00000390400 NUTM2GQ5VZR2 741 aa9.73□□□□□ -0.85
TRBV28-201ENST00000390400 MORC1Q86VD1 984 aa9.73□□□□□ -0.85
TRBV28-201ENST00000390400 NLRP13Q86W25 1043 aa9.73□□□□□ -0.85
TRBV28-201ENST00000390400 IPO9Q96P70 1041 aaKnown RBP9.73□□□□□ -0.85
TRBV28-201ENST00000390400 SPSB2Q99619 263 aa9.73□□□□□ -0.85
TRBV28-201ENST00000390400 NOVA2Q9UNW9 492 aaKnown RBP9.73□□□□□ -0.85
TRBV28-201ENST00000390400 OVOS2A0A0J9YW53 1432 aa9.73□□□□□ -0.85
TRBV28-201ENST00000390400 OVOS2Q6IE36 1432 aa9.73□□□□□ -0.85
TRBV28-201ENST00000390400 MED1Q15648 1581 aaPredicted RBP9.72□□□□□ -0.85
TRBV28-201ENST00000390400 PPM1GO15355 546 aaPredicted RBP9.72□□□□□ -0.85
TRBV28-201ENST00000390400 RALBP1Q15311 655 aa9.72□□□□□ -0.85
TRBV28-201ENST00000390400 PDXDC2PQ6P474 469 aa9.72□□□□□ -0.85
TRBV28-201ENST00000390400 MARF1Q9Y4F3 1742 aaKnown RBP9.72□□□□□ -0.85
TRBV28-201ENST00000390400 PARD3Q8TEW0 1356 aa9.72□□□□□ -0.85
TRBV28-201ENST00000390400 PTK7Q13308 1070 aa9.71□□□□□ -0.86
TRBV28-201ENST00000390400 NCOA4Q13772 614 aa9.71□□□□□ -0.86
TRBV28-201ENST00000390400 ADAM32Q8TC27 787 aa9.71□□□□□ -0.86
TRBV28-201ENST00000390400 MKRN1Q9UHC7 482 aaKnown RBP9.71□□□□□ -0.86
TRBV28-201ENST00000390400 USP19O94966 1318 aa9.71□□□□□ -0.86
TRBV28-201ENST00000390400 RNF123Q5XPI4 1314 aa9.71□□□□□ -0.86
TRBV28-201ENST00000390400 PNPLA6Q8IY17 1366 aa9.71□□□□□ -0.86
TRBV28-201ENST00000390400 POTEMA6NI47 508 aa9.7□□□□□ -0.86
TRBV28-201ENST00000390400 HSPA1LP34931 641 aa9.7□□□□□ -0.86
TRBV28-201ENST00000390400 TNNT2P45379 298 aaPredicted RBP9.7□□□□□ -0.86
TRBV28-201ENST00000390400 TRAF7Q6Q0C0 670 aa9.7□□□□□ -0.86
TRBV28-201ENST00000390400 FBXO41Q8TF61 875 aa9.7□□□□□ -0.86
TRBV28-201ENST00000390400 PRKRIP1Q9H875 184 aaPredicted RBP9.7□□□□□ -0.86
TRBV28-201ENST00000390400 PCDHB9Q9Y5E1 797 aa9.7□□□□□ -0.86
TRBV28-201ENST00000390400 SLIT3O75094 1523 aa9.7□□□□□ -0.86
TRBV28-201ENST00000390400 COL22A1Q8NFW1 1626 aaPredicted RBP9.7□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L15C9J2P7 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L10C9JJH3 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L13C9JLJ4 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L12C9JPN9 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L11C9JVI0 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L21D6R901 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L18D6R9N7 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L22D6RA61 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L17D6RBQ6 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L19D6RCP7 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L20D6RJB6 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 SCNN1AP37088 669 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 USP17L24Q0WX57 530 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 SHPRHQ149N8 1683 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 SH3BP5LQ7L8J4 393 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 SMG6Q86US8 1419 aaKnown RBP9.69□□□□□ -0.86
TRBV28-201ENST00000390400 KCNH5Q8NCM2 988 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 ABCA3Q99758 1704 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 KRTAP3-2Q9BYR7 98 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 PHRF1Q9P1Y6 1649 aaKnown RBP9.69□□□□□ -0.86
TRBV28-201ENST00000390400 JCADQ9P266 1359 aa9.69□□□□□ -0.86
TRBV28-201ENST00000390400 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
TRBV28-201ENST00000390400 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
TRBV28-201ENST00000390400 NFAT5O94916 1531 aa9.68□□□□□ -0.86
TRBV28-201ENST00000390400 AATKQ6ZMQ8 1374 aa9.68□□□□□ -0.86
TRBV28-201ENST00000390400 MYBBP1AQ9BQG0 1328 aaKnown RBP9.68□□□□□ -0.86
TRBV28-201ENST00000390400 PTK2Q05397 1052 aa9.68□□□□□ -0.86
TRBV28-201ENST00000390400 THSD4Q6ZMP0 1018 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms