RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 SOGA3Q5TF21 947 aa11.55□□□□□ -0.56
TRBV27-201ENST00000390399 CCDC30Q5VVM6 783 aa11.55□□□□□ -0.56
TRBV27-201ENST00000390399 ANKRD13DQ6ZTN6 518 aa11.55□□□□□ -0.56
TRBV27-201ENST00000390399 NLRP10Q86W26 655 aa11.55□□□□□ -0.56
TRBV27-201ENST00000390399 WDR63Q8IWG1 891 aa11.55□□□□□ -0.56
TRBV27-201ENST00000390399 TSPYL6Q8N831 410 aa11.55□□□□□ -0.56
TRBV27-201ENST00000390399 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
TRBV27-201ENST00000390399 FANCIQ9NVI1 1328 aa11.55□□□□□ -0.56
TRBV27-201ENST00000390399 TIAM2Q8IVF5 1701 aa11.55□□□□□ -0.56
TRBV27-201ENST00000390399 LMNB1P20700 586 aa11.54□□□□□ -0.56
TRBV27-201ENST00000390399 TWISTNBQ3B726 338 aaPredicted RBP11.54□□□□□ -0.56
TRBV27-201ENST00000390399 RPGRQ92834 1020 aaKnown RBP11.54□□□□□ -0.56
TRBV27-201ENST00000390399 PHAXQ9H814 394 aaKnown RBP11.54□□□□□ -0.56
TRBV27-201ENST00000390399 FER1L6Q2WGJ9 1857 aa11.54□□□□□ -0.56
TRBV27-201ENST00000390399 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
TRBV27-201ENST00000390399 CCDC93Q567U6 631 aa11.53□□□□□ -0.56
TRBV27-201ENST00000390399 RIC3Q7Z5B4 369 aa11.53□□□□□ -0.56
TRBV27-201ENST00000390399 STK31Q9BXU1 1019 aa11.53□□□□□ -0.56
TRBV27-201ENST00000390399 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
TRBV27-201ENST00000390399 SH3TC1Q8TE82 1336 aa11.53□□□□□ -0.56
TRBV27-201ENST00000390399 ATP5J2-PTCD1G3V325 749 aa11.52□□□□□ -0.57
TRBV27-201ENST00000390399 DDX58O95786 925 aaKnown RBP11.52□□□□□ -0.57
TRBV27-201ENST00000390399 HOXA10P31260 410 aaPredicted RBP11.52□□□□□ -0.57
TRBV27-201ENST00000390399 PRELPP51888 382 aa11.52□□□□□ -0.57
TRBV27-201ENST00000390399 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
TRBV27-201ENST00000390399 RBM17Q96I25 401 aaKnown RBP11.52□□□□□ -0.57
TRBV27-201ENST00000390399 NLRP3Q96P20 1036 aa11.52□□□□□ -0.57
TRBV27-201ENST00000390399 ISCA1Q9BUE6 129 aa11.52□□□□□ -0.57
TRBV27-201ENST00000390399 TRMT112Q9UI30 125 aaKnown RBP11.52□□□□□ -0.57
TRBV27-201ENST00000390399 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.57
TRBV27-201ENST00000390399 ZC3H4Q9UPT8 1303 aaKnown RBP11.52□□□□□ -0.57
TRBV27-201ENST00000390399 LAMB2P55268 1798 aa11.51□□□□□ -0.57
TRBV27-201ENST00000390399 TCERG1O14776 1098 aaKnown RBP11.51□□□□□ -0.57
TRBV27-201ENST00000390399 C1QTNF8P60827 252 aa11.51□□□□□ -0.57
TRBV27-201ENST00000390399 SLC10A5Q5PT55 438 aa11.51□□□□□ -0.57
TRBV27-201ENST00000390399 C7orf43Q8WVR3 580 aa11.51□□□□□ -0.57
TRBV27-201ENST00000390399 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
TRBV27-201ENST00000390399 MYH16Q9H6N6 1097 aa11.51□□□□□ -0.57
TRBV27-201ENST00000390399 CCDC88AQ3V6T2 1871 aa11.51□□□□□ -0.57
TRBV27-201ENST00000390399 DDX60Q8IY21 1712 aaKnown RBP11.5□□□□□ -0.57
TRBV27-201ENST00000390399 CCER2I3L3R5 266 aa11.5□□□□□ -0.57
TRBV27-201ENST00000390399 HCLS1P14317 486 aaPredicted RBP11.5□□□□□ -0.57
TRBV27-201ENST00000390399 EXOSC9Q06265 439 aaKnown RBP11.5□□□□□ -0.57
TRBV27-201ENST00000390399 OLFM4Q6UX06 510 aa11.5□□□□□ -0.57
TRBV27-201ENST00000390399 RTKN2Q8IZC4 609 aa11.5□□□□□ -0.57
TRBV27-201ENST00000390399 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
TRBV27-201ENST00000390399 CRAMP1Q96RY5 1269 aa11.5□□□□□ -0.57
TRBV27-201ENST00000390399 MYD88Q99836 296 aa11.5□□□□□ -0.57
TRBV27-201ENST00000390399 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
TRBV27-201ENST00000390399 KDM2BQ8NHM5 1336 aa11.5□□□□□ -0.57
TRBV27-201ENST00000390399 DICER1Q9UPY3 1922 aaKnown RBP11.49□□□□□ -0.57
TRBV27-201ENST00000390399 KIF3CO14782 793 aa11.49□□□□□ -0.57
TRBV27-201ENST00000390399 PPEF1O14829 653 aaPredicted RBP11.49□□□□□ -0.57
TRBV27-201ENST00000390399 FKBP4Q02790 459 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRBV27-201ENST00000390399 TRIM28Q13263 835 aaKnown RBP11.49□□□□□ -0.57
TRBV27-201ENST00000390399 FAM89AQ96GI7 184 aa11.49□□□□□ -0.57
TRBV27-201ENST00000390399 NMRK2Q9NPI5 230 aa11.49□□□□□ -0.57
TRBV27-201ENST00000390399 ABCC4O15439 1325 aa11.49□□□□□ -0.57
TRBV27-201ENST00000390399 ZNF521Q96K83 1311 aa11.49□□□□□ -0.57
TRBV27-201ENST00000390399 VAMP4O75379 141 aa11.48□□□□□ -0.57
TRBV27-201ENST00000390399 SLC4A2P04920 1241 aa11.48□□□□□ -0.57
TRBV27-201ENST00000390399 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
TRBV27-201ENST00000390399 KSR2Q6VAB6 950 aa11.48□□□□□ -0.57
TRBV27-201ENST00000390399 METTL22Q9BUU2 404 aaPredicted RBP11.48□□□□□ -0.57
TRBV27-201ENST00000390399 MAP3K2Q9Y2U5 619 aa11.48□□□□□ -0.57
TRBV27-201ENST00000390399 SNED1Q8TER0 1413 aa11.48□□□□□ -0.57
TRBV27-201ENST00000390399 PI4KAP2A4QPH2 592 aa11.47□□□□□ -0.57
TRBV27-201ENST00000390399 GLTPD2A6NH11 291 aa11.47□□□□□ -0.57
TRBV27-201ENST00000390399 FLIIQ13045 1269 aa11.47□□□□□ -0.57
TRBV27-201ENST00000390399 RTL5Q5HYW3 569 aaPredicted RBP11.47□□□□□ -0.57
TRBV27-201ENST00000390399 DDX46Q7L014 1031 aaKnown RBP11.47□□□□□ -0.57
TRBV27-201ENST00000390399 G2E3Q7L622 706 aa11.47□□□□□ -0.57
TRBV27-201ENST00000390399 PI4KAP1Q8N8J0 262 aa11.47□□□□□ -0.57
TRBV27-201ENST00000390399 ZBTB38Q8NAP3 1195 aaPredicted RBP11.47□□□□□ -0.57
TRBV27-201ENST00000390399 CCDC191Q8NCU4 936 aa11.47□□□□□ -0.57
TRBV27-201ENST00000390399 ZNF277Q9NRM2 450 aaPredicted RBP11.47□□□□□ -0.57
TRBV27-201ENST00000390399 CWC25Q9NXE8 425 aaPredicted RBP11.47□□□□□ -0.57
TRBV27-201ENST00000390399 IRS4O14654 1257 aaPredicted RBP11.46□□□□□ -0.57
TRBV27-201ENST00000390399 NEXNQ0ZGT2 675 aa11.46□□□□□ -0.57
TRBV27-201ENST00000390399 GRAPQ13588 217 aa11.46□□□□□ -0.57
TRBV27-201ENST00000390399 GRIPAP1Q4V328 841 aa11.46□□□□□ -0.57
TRBV27-201ENST00000390399 SLC51AQ86UW1 340 aa11.46□□□□□ -0.57
TRBV27-201ENST00000390399 GRAPLQ8TC17 118 aaPredicted RBP11.46□□□□□ -0.57
TRBV27-201ENST00000390399 PSMD1Q99460 953 aa11.46□□□□□ -0.57
TRBV27-201ENST00000390399 TMX4Q9H1E5 349 aaPredicted RBP11.46□□□□□ -0.57
TRBV27-201ENST00000390399 PCCAP05165 728 aaPredicted RBP11.45□□□□□ -0.58
TRBV27-201ENST00000390399 HSP90B1P14625 803 aaKnown RBP11.45□□□□□ -0.58
TRBV27-201ENST00000390399 IARSP41252 1262 aaKnown RBP11.45□□□□□ -0.58
TRBV27-201ENST00000390399 FKBP5Q13451 457 aaPredicted RBP11.45□□□□□ -0.58
TRBV27-201ENST00000390399 SF3B3Q15393 1217 aaKnown RBP11.45□□□□□ -0.58
TRBV27-201ENST00000390399 DIEXFQ68CQ4 756 aaKnown RBP11.45□□□□□ -0.58
TRBV27-201ENST00000390399 DPY19L2Q6NUT2 758 aa11.45□□□□□ -0.58
TRBV27-201ENST00000390399 C16orf71Q8IYS4 520 aaPredicted RBP11.45□□□□□ -0.58
TRBV27-201ENST00000390399 RRAGCQ9HB90 399 aa11.45□□□□□ -0.58
TRBV27-201ENST00000390399 ATP6V0A2Q9Y487 856 aa11.45□□□□□ -0.58
TRBV27-201ENST00000390399 CACNA1FO60840 1977 aa11.45□□□□□ -0.58
TRBV27-201ENST00000390399 WDR90Q96KV7 1748 aa11.44□□□□□ -0.58
TRBV27-201ENST00000390399 E9PSI1 815 aa11.44□□□□□ -0.58
TRBV27-201ENST00000390399 BBOX1O75936 387 aa11.44□□□□□ -0.58
TRBV27-201ENST00000390399 IGKV5-2P06315 115 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms