RNA–Protein interactions for RNA: ENST00000389428.7

SEMA6D-206, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-206ENST00000389428 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 HSPA4P34932 840 aa13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 IARSP41252 1262 aaKnown RBP13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 BMP15O95972 392 aa13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 RAD54L2Q9Y4B4 1467 aa13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 ARL1P40616 181 aaPredicted RBP13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 TTC14Q96N46 770 aa13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 CRNKL1Q9BZJ0 848 aaKnown RBP13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 CBX1P83916 185 aa13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 IL27Q8NEV9 243 aa13.67□□□□□ -0.22
SEMA6D-206ENST00000389428 METAP2P50579 478 aaKnown RBP eCLIP13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 MFSD6Q6ZSS7 791 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 DDX46Q7L014 1031 aaKnown RBP13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 TMPOP42166 694 aaKnown RBP13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 UVSSAQ2YD98 709 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 RGS22Q8NE09 1264 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 KIAA1524Q8TCG1 905 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 TRIM47Q96LD4 638 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 HMG20BQ9P0W2 317 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 TSPY2A6NKD2 308 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 IDEP14735 1019 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 CCDC6Q16204 474 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 MAP7D1Q3KQU3 841 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 PTPRCP08575 1304 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 PHACTR2O75167 634 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 CYLC1P35663 651 aaPredicted RBP13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 PPP1R42Q7Z4L9 355 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 NCOA7Q8NI08 942 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 CCDC171Q6TFL3 1326 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 ATP2A1O14983 1001 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 CAVIN2O95810 425 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 GJB2P29033 226 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 LMBR1Q8WVP7 490 aa13.66□□□□□ -0.22
SEMA6D-206ENST00000389428 EPRSP07814 1512 aaKnown RBP13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 NAP1L3Q99457 506 aaPredicted RBP13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 UBA7P41226 1012 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 MSANTD4Q8NCY6 345 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 SMC6Q96SB8 1091 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 UQCRFS1P1P0C7P4 283 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 MAP3K9P80192 1104 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 DNAAF4Q8WXU2 420 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 NUDT16Q96DE0 195 aaKnown RBP13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 MMRN2Q9H8L6 949 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 HDAC9Q9UKV0 1011 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 B4DLN1 442 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 MRPL12P52815 198 aaKnown RBP13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
SEMA6D-206ENST00000389428 C6orf229H3BNL8 230 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 MCM5P33992 734 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 LRSAM1Q6UWE0 723 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 ODF2LQ9ULJ1 636 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 RUSC2Q8N2Y8 1516 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 OPA1O60313 960 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 CEP135Q66GS9 1140 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 CCDC102BQ68D86 513 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 KRT23Q9C075 422 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 TRMT1Q9NXH9 659 aaKnown RBP13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 TPD52P55327 224 aaPredicted RBP13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 ZC3H6P61129 1189 aaKnown RBP13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 NCBP1Q09161 790 aaKnown RBP13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 CCDC14Q49A88 953 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 CCDC129Q6ZRS4 1044 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 ZGPATQ8N5A5 531 aaKnown RBP13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 SUPT6HQ7KZ85 1726 aaKnown RBP13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 APBB1IPQ7Z5R6 666 aaPredicted RBP13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
SEMA6D-206ENST00000389428 FAM135AQ9P2D6 1515 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 SLFN5Q08AF3 891 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 AFAP1Q8N556 730 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 IMPG2Q9BZV3 1241 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 SERPINA10Q9UK55 444 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 RRAGBQ5VZM2 374 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 CCDC63Q8NA47 563 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 CCDC8Q9H0W5 538 aaPredicted RBP13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 VAT1LQ9HCJ6 419 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 IGF1RP08069 1367 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 SNX16P57768 344 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 ANKS4BQ8N8V4 417 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 GTF2F1P35269 517 aaKnown RBP eCLIP13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 XPCQ01831 940 aaPredicted RBP13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 GSTA5Q7RTV2 222 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 CCDC82Q8N4S0 544 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 PAIP2Q9BPZ3 127 aaKnown RBP13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 MRVI1Q9Y6F6 885 aa13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 NKTRP30414 1462 aaKnown RBP13.63□□□□□ -0.23
SEMA6D-206ENST00000389428 STAT6P42226 847 aa13.62□□□□□ -0.23
SEMA6D-206ENST00000389428 ZSCAN16Q9H4T2 348 aaPredicted RBP13.62□□□□□ -0.23
SEMA6D-206ENST00000389428 CWC25Q9NXE8 425 aaPredicted RBP13.62□□□□□ -0.23
SEMA6D-206ENST00000389428 ATP2A2P16615 1042 aaKnown RBP13.62□□□□□ -0.23
SEMA6D-206ENST00000389428 PSMC4P43686 418 aa13.62□□□□□ -0.23
SEMA6D-206ENST00000389428 PTCD1O75127 700 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms