RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 LTBP1Q14766 1721 aa28.52■■■□□ 2.16
CNEP1R1-201ENST00000389134 THSD7BQ9C0I4 1608 aa28.52■■■□□ 2.16
CNEP1R1-201ENST00000389134 LAMB4A4D0S4 1761 aa28.52■■■□□ 2.16
CNEP1R1-201ENST00000389134 CAPNS2Q96L46 248 aa28.51■■■□□ 2.15
CNEP1R1-201ENST00000389134 HTATSF1O43719 755 aaKnown RBP28.5■■■□□ 2.15
CNEP1R1-201ENST00000389134 FAM161AQ3B820 660 aa28.5■■■□□ 2.15
CNEP1R1-201ENST00000389134 COL4A5P29400 1685 aa28.49■■■□□ 2.15
CNEP1R1-201ENST00000389134 PAXIP1Q6ZW49 1069 aaPredicted RBP28.49■■■□□ 2.15
CNEP1R1-201ENST00000389134 LARGE2Q8N3Y3 721 aa28.49■■■□□ 2.15
CNEP1R1-201ENST00000389134 RPGRQ92834 1020 aaKnown RBP28.49■■■□□ 2.15
CNEP1R1-201ENST00000389134 ERVV-1B6SEH8 477 aa28.48■■■□□ 2.15
CNEP1R1-201ENST00000389134 HOXA10P31260 410 aaPredicted RBP28.48■■■□□ 2.15
CNEP1R1-201ENST00000389134 EPS15P42566 896 aa28.48■■■□□ 2.15
CNEP1R1-201ENST00000389134 SCNN1DP51172 638 aa28.48■■■□□ 2.15
CNEP1R1-201ENST00000389134 USP50Q70EL3 339 aaPredicted RBP28.48■■■□□ 2.15
CNEP1R1-201ENST00000389134 NUTM1Q86Y26 1132 aa28.48■■■□□ 2.15
CNEP1R1-201ENST00000389134 GPR101Q96P66 508 aaPredicted RBP28.48■■■□□ 2.15
CNEP1R1-201ENST00000389134 ABCC12Q96J65 1359 aa28.48■■■□□ 2.15
CNEP1R1-201ENST00000389134 TAF7Q15545 349 aaPredicted RBP28.47■■■□□ 2.15
CNEP1R1-201ENST00000389134 CCER1Q8TC90 406 aaPredicted RBP28.47■■■□□ 2.15
CNEP1R1-201ENST00000389134 U2AF1L5P0DN76 240 aaPredicted RBP28.46■■■□□ 2.15
CNEP1R1-201ENST00000389134 U2AF1Q01081 240 aaKnown RBP eCLIP28.46■■■□□ 2.15
CNEP1R1-201ENST00000389134 DCTN1Q14203 1278 aa28.46■■■□□ 2.15
CNEP1R1-201ENST00000389134 RIC1Q4ADV7 1423 aa28.45■■■□□ 2.15
CNEP1R1-201ENST00000389134 CYP4F22Q6NT55 531 aa28.45■■■□□ 2.14
CNEP1R1-201ENST00000389134 CASP8AP2Q9UKL3 1982 aa28.44■■■□□ 2.14
CNEP1R1-201ENST00000389134 FMR1Q06787 632 aaKnown RBP eCLIP28.44■■■□□ 2.14
CNEP1R1-201ENST00000389134 CST9Q5W186 159 aa28.44■■■□□ 2.14
CNEP1R1-201ENST00000389134 RBM17Q96I25 401 aaKnown RBP28.44■■■□□ 2.14
CNEP1R1-201ENST00000389134 MAP3K15Q6ZN16 1313 aa28.43■■■□□ 2.14
CNEP1R1-201ENST00000389134 IBTKQ9P2D0 1353 aaPredicted RBP28.43■■■□□ 2.14
CNEP1R1-201ENST00000389134 CCDC85CA6NKD9 419 aa28.43■■■□□ 2.14
CNEP1R1-201ENST00000389134 MAP2K2P36507 400 aa28.43■■■□□ 2.14
CNEP1R1-201ENST00000389134 GRM1Q13255 1194 aa28.43■■■□□ 2.14
CNEP1R1-201ENST00000389134 NIM1KQ8IY84 436 aa28.43■■■□□ 2.14
CNEP1R1-201ENST00000389134 NGEFQ8N5V2 710 aa28.43■■■□□ 2.14
CNEP1R1-201ENST00000389134 CRAMP1Q96RY5 1269 aa28.43■■■□□ 2.14
CNEP1R1-201ENST00000389134 TLL2Q9Y6L7 1015 aa28.43■■■□□ 2.14
CNEP1R1-201ENST00000389134 RGS19P49795 217 aa28.42■■■□□ 2.14
CNEP1R1-201ENST00000389134 MLLT1Q03111 559 aaPredicted RBP28.42■■■□□ 2.14
CNEP1R1-201ENST00000389134 DLG5Q8TDM6 1919 aa28.41■■■□□ 2.14
CNEP1R1-201ENST00000389134 KIF6Q6ZMV9 814 aa28.41■■■□□ 2.14
CNEP1R1-201ENST00000389134 TRAF5O00463 557 aa28.4■■■□□ 2.14
CNEP1R1-201ENST00000389134 PPEF1O14829 653 aaPredicted RBP28.4■■■□□ 2.14
CNEP1R1-201ENST00000389134 VPS33BQ9H267 617 aa28.4■■■□□ 2.14
CNEP1R1-201ENST00000389134 ADARB2Q9NS39 739 aaKnown RBP28.4■■■□□ 2.14
CNEP1R1-201ENST00000389134 KDM3BQ7LBC6 1761 aa28.39■■■□□ 2.14
CNEP1R1-201ENST00000389134 PNISRQ8TF01 805 aaKnown RBP28.39■■■□□ 2.14
CNEP1R1-201ENST00000389134 TMX4Q9H1E5 349 aaPredicted RBP28.39■■■□□ 2.14
CNEP1R1-201ENST00000389134 MIS18AQ9NYP9 233 aa28.39■■■□□ 2.14
CNEP1R1-201ENST00000389134 PPIP5K2O43314 1243 aa28.38■■■□□ 2.13
CNEP1R1-201ENST00000389134 CA12O43570 354 aa28.37■■■□□ 2.13
CNEP1R1-201ENST00000389134 GPTP24298 496 aa28.37■■■□□ 2.13
CNEP1R1-201ENST00000389134 SUSD4Q5VX71 490 aa28.37■■■□□ 2.13
CNEP1R1-201ENST00000389134 TTLL7Q6ZT98 887 aa28.37■■■□□ 2.13
CNEP1R1-201ENST00000389134 GPRC5DQ9NZD1 345 aa28.37■■■□□ 2.13
CNEP1R1-201ENST00000389134 RRP7AQ9Y3A4 280 aaKnown RBP28.37■■■□□ 2.13
CNEP1R1-201ENST00000389134 UBN2Q6ZU65 1347 aa28.37■■■□□ 2.13
CNEP1R1-201ENST00000389134 TCERG1O14776 1098 aaKnown RBP28.36■■■□□ 2.13
CNEP1R1-201ENST00000389134 AOC2O75106 756 aa28.35■■■□□ 2.13
CNEP1R1-201ENST00000389134 SAPCD2Q86UD0 394 aa28.35■■■□□ 2.13
CNEP1R1-201ENST00000389134 ZNF34Q8IZ26 560 aa28.35■■■□□ 2.13
CNEP1R1-201ENST00000389134 PDE4DIPQ5VU43 2346 aa28.35■■■□□ 2.13
CNEP1R1-201ENST00000389134 PPP1R42Q7Z4L9 355 aa28.34■■■□□ 2.13
CNEP1R1-201ENST00000389134 HHIPL1Q96JK4 782 aa28.34■■■□□ 2.13
CNEP1R1-201ENST00000389134 ZBTB3Q9H5J0 574 aa28.34■■■□□ 2.13
CNEP1R1-201ENST00000389134 CELF2O95319 508 aaKnown RBP28.33■■■□□ 2.13
CNEP1R1-201ENST00000389134 NTSR2O95665 410 aa28.33■■■□□ 2.13
CNEP1R1-201ENST00000389134 MYL6BP14649 208 aa28.33■■■□□ 2.13
CNEP1R1-201ENST00000389134 AOC3Q16853 763 aa28.33■■■□□ 2.13
CNEP1R1-201ENST00000389134 SUPT20HQ8NEM7 779 aa28.33■■■□□ 2.13
CNEP1R1-201ENST00000389134 NLRP3Q96P20 1036 aa28.33■■■□□ 2.13
CNEP1R1-201ENST00000389134 TSKSQ9UJT2 592 aa28.33■■■□□ 2.13
CNEP1R1-201ENST00000389134 ZNRF3Q9ULT6 936 aa28.33■■■□□ 2.13
CNEP1R1-201ENST00000389134 ATP6V0A2Q9Y487 856 aa28.33■■■□□ 2.13
CNEP1R1-201ENST00000389134 PPP2R1AP30153 589 aa28.32■■■□□ 2.12
CNEP1R1-201ENST00000389134 GIGYF2Q6Y7W6 1299 aaKnown RBP28.32■■■□□ 2.12
CNEP1R1-201ENST00000389134 NEFMP07197 916 aa28.31■■■□□ 2.12
CNEP1R1-201ENST00000389134 EIF4A1P60842 406 aaKnown RBP28.31■■■□□ 2.12
CNEP1R1-201ENST00000389134 CXCL9Q07325 125 aa28.31■■■□□ 2.12
CNEP1R1-201ENST00000389134 SLC51AQ86UW1 340 aa28.31■■■□□ 2.12
CNEP1R1-201ENST00000389134 PGAP2Q9UHJ9 254 aa28.31■■■□□ 2.12
CNEP1R1-201ENST00000389134 BRPF1P55201 1214 aaPredicted RBP28.3■■■□□ 2.12
CNEP1R1-201ENST00000389134 PARP10Q53GL7 1025 aa28.3■■■□□ 2.12
CNEP1R1-201ENST00000389134 C3orf67Q6ZVT6 689 aa28.3■■■□□ 2.12
CNEP1R1-201ENST00000389134 RTFDC1Q9BY42 306 aaPredicted RBP28.3■■■□□ 2.12
CNEP1R1-201ENST00000389134 POLR2AP24928 1970 aaKnown RBP28.3■■■□□ 2.12
CNEP1R1-201ENST00000389134 CDHR2Q9BYE9 1310 aa28.29■■■□□ 2.12
CNEP1R1-201ENST00000389134 ZC3H15Q8WU90 426 aaKnown RBP28.29■■■□□ 2.12
CNEP1R1-201ENST00000389134 MCOLN1Q9GZU1 580 aa28.29■■■□□ 2.12
CNEP1R1-201ENST00000389134 ERBB4Q15303 1308 aa28.28■■■□□ 2.12
CNEP1R1-201ENST00000389134 GMPSP49915 693 aaPredicted RBP28.28■■■□□ 2.12
CNEP1R1-201ENST00000389134 GLIS2Q9BZE0 524 aaPredicted RBP28.28■■■□□ 2.12
CNEP1R1-201ENST00000389134 ANKRD36CQ5JPF3 1778 aa28.27■■■□□ 2.12
CNEP1R1-201ENST00000389134 SLC10A5Q5PT55 438 aa28.27■■■□□ 2.12
CNEP1R1-201ENST00000389134 CIAPIN1Q6FI81 312 aa28.26■■■□□ 2.11
CNEP1R1-201ENST00000389134 LAMB2P55268 1798 aa28.26■■■□□ 2.11
CNEP1R1-201ENST00000389134 ABCC4O15439 1325 aa28.25■■■□□ 2.11
CNEP1R1-201ENST00000389134 TNRC18O15417 2968 aaPredicted RBP28.25■■■□□ 2.11
CNEP1R1-201ENST00000389134 BBOX1O75936 387 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms