RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 MBIPQ9NS73 344 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 IL16Q14005 1332 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 PPP1R42Q7Z4L9 355 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 DYDC1Q8WWB3 177 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 BAG4O95429 457 aaKnown RBP14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 MTIF2P46199 727 aaKnown RBP14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 NLRP5P59047 1200 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 ADAMTS12P58397 1594 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 ADGRF5Q8IZF2 1346 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 EXOC5O00471 708 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 CAVIN2O95810 425 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 STXBP4Q6ZWJ1 553 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 TBC1D9Q6ZT07 1266 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 CKAP2LQ8IYA6 745 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 CNNM3Q8NE01 707 aa14.18□□□□□ -0.14
KCNQ3-201ENST00000388996 CCDC40Q4G0X9 1142 aa14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 USP8P40818 1118 aa14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 PAXIP1Q6ZW49 1069 aaPredicted RBP14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 PDE4DIPQ5VU43 2346 aa14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 TBCAO75347 108 aaKnown RBP14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 METAP2P50579 478 aaKnown RBP eCLIP14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 CCDC152Q4G0S7 254 aa14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 KAT14Q9H8E8 782 aa14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 GPATCH8Q9UKJ3 1502 aaKnown RBP14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 NEMFO60524 1076 aa14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 USO1O60763 962 aaKnown RBP14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 CRNKL1Q9BZJ0 848 aaKnown RBP14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 DDX19AQ9NUU7 478 aaKnown RBP14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 GCC2Q8IWJ2 1684 aa14.17□□□□□ -0.14
KCNQ3-201ENST00000388996 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 BMP2KLQ5H9B9 411 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 FBXO31Q5XUX0 539 aaPredicted RBP14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 STX6O43752 255 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 GSDMDP57764 484 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 ZNF219Q9P2Y4 722 aaPredicted RBP14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 UHRF1BP1LA0JNW5 1464 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 TTC22Q5TAA0 569 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 ANKRD12Q6UB98 2062 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 MCM5P33992 734 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 TMCO3Q6UWJ1 677 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 ZNF518AQ6AHZ1 1483 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 LDHCP07864 332 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 DNA2P51530 1060 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 AMPD3Q01432 767 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 CCDC144CPQ8IYA2 1237 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 CCDC113Q9H0I3 377 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 SNRPA1P09661 255 aaKnown RBP14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 SYCP3Q8IZU3 236 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 PDCL2Q8N4E4 241 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 USP16Q9Y5T5 823 aa14.16□□□□□ -0.14
KCNQ3-201ENST00000388996 HAND2P61296 217 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 IFNL2Q8IZJ0 200 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 PPP4R3BQ5MIZ7 849 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 SSFA2P28290 1259 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 GUCY1B3Q02153 619 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 CTNNA2P26232 953 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 ERICH4A6NGS2 130 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 IDI1Q13907 227 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 NCOA7Q8NI08 942 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 FERMT2Q96AC1 680 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 TNPO1Q92973 898 aaKnown RBP14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 TAOK3Q9H2K8 898 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 SAMM50Q9Y512 469 aa14.15□□□□□ -0.14
KCNQ3-201ENST00000388996 TSHZ3Q63HK5 1081 aa14.15□□□□□ -0.15
KCNQ3-201ENST00000388996 ATP5J2-PTCD1G3V325 749 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 CFAP74Q9C0B2 1584 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 CADPS2Q86UW7 1296 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 EHBP1Q8NDI1 1231 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 NUP160Q12769 1436 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 POTEB2H3BUK9 544 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 GJB2P29033 226 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 EXOC1Q9NV70 894 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 DNMT1P26358 1616 aaKnown RBP14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 SHTN1A0MZ66 631 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 TSPY2A6NKD2 308 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 LIG1P18858 919 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 SPDYE4A6NLX3 237 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 UBA7P41226 1012 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 KIF4BQ2VIQ3 1234 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 TMEM87AQ8NBN3 555 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 KRT23Q9C075 422 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 ARHGEF12Q9NZN5 1544 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 GOLGA6L10A0A0M3HER8 536 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 BIN1O00499 593 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 TNNT1P13805 278 aa14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 ORC3Q9UBD5 711 aaPredicted RBP14.14□□□□□ -0.15
KCNQ3-201ENST00000388996 RIMS2Q9UQ26 1411 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 MYO1BO43795 1136 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 ZGPATQ8N5A5 531 aaKnown RBP14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 SNRKQ9NRH2 765 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 URB1O60287 2271 aaKnown RBP14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 KANK3Q6NY19 840 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 SLC26A6Q9BXS9 759 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 PI4KAP2A4QPH2 592 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 PI4KAP1Q8N8J0 262 aa14.13□□□□□ -0.15
KCNQ3-201ENST00000388996 BICD1Q96G01 975 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms