RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 TIAM2Q8IVF5 1701 aa15□□□□□ -0.01
APOBEC3F-202ENST00000381565 DICER1Q9UPY3 1922 aaKnown RBP15□□□□□ -0.01
APOBEC3F-202ENST00000381565 IL16Q14005 1332 aa14.99□□□□□ -0.01
APOBEC3F-202ENST00000381565 C16orf71Q8IYS4 520 aaPredicted RBP14.99□□□□□ -0.01
APOBEC3F-202ENST00000381565 CNBD1Q8NA66 436 aa14.99□□□□□ -0.01
APOBEC3F-202ENST00000381565 ABCC12Q96J65 1359 aa14.98□□□□□ -0.01
APOBEC3F-202ENST00000381565 IBTKQ9P2D0 1353 aaPredicted RBP14.98□□□□□ -0.01
APOBEC3F-202ENST00000381565 TAF1P21675 1872 aa14.98□□□□□ -0.01
APOBEC3F-202ENST00000381565 GIGYF2Q6Y7W6 1299 aaKnown RBP14.98□□□□□ -0.01
APOBEC3F-202ENST00000381565 TSPYL6Q8N831 410 aa14.98□□□□□ -0.01
APOBEC3F-202ENST00000381565 XAGE3Q8WTP9 111 aa14.98□□□□□ -0.01
APOBEC3F-202ENST00000381565 SALL2Q9Y467 1007 aaPredicted RBP14.98□□□□□ -0.01
APOBEC3F-202ENST00000381565 FANCIQ9NVI1 1328 aa14.97□□□□□ -0.01
APOBEC3F-202ENST00000381565 SPDYE4A6NLX3 237 aa14.97□□□□□ -0.01
APOBEC3F-202ENST00000381565 ELL2O00472 640 aaPredicted RBP14.97□□□□□ -0.01
APOBEC3F-202ENST00000381565 NBPF5PQ86XG9 351 aaPredicted RBP14.97□□□□□ -0.01
APOBEC3F-202ENST00000381565 BRIP1Q9BX63 1249 aa14.97□□□□□ -0.01
APOBEC3F-202ENST00000381565 RIC1Q4ADV7 1423 aa14.97□□□□□ -0.01
APOBEC3F-202ENST00000381565 ZNF521Q96K83 1311 aa14.96□□□□□ -0.01
APOBEC3F-202ENST00000381565 ZC3H4Q9UPT8 1303 aaKnown RBP14.96□□□□□ -0.01
APOBEC3F-202ENST00000381565 CCER2I3L3R5 266 aa14.96□□□□□ -0.01
APOBEC3F-202ENST00000381565 GPTP24298 496 aa14.96□□□□□ -0.01
APOBEC3F-202ENST00000381565 COPS6Q7L5N1 327 aa14.96□□□□□ -0.01
APOBEC3F-202ENST00000381565 C2CD5Q86YS7 1000 aa14.96□□□□□ -0.01
APOBEC3F-202ENST00000381565 ZNF34Q8IZ26 560 aa14.96□□□□□ -0.01
APOBEC3F-202ENST00000381565 DBF4Q9UBU7 674 aaPredicted RBP14.96□□□□□ -0.01
APOBEC3F-202ENST00000381565 NFKBIEO00221 500 aa14.95□□□□□ -0.02
APOBEC3F-202ENST00000381565 ST5P78524 1137 aa14.95□□□□□ -0.02
APOBEC3F-202ENST00000381565 AIMP1Q12904 312 aaKnown RBP14.95□□□□□ -0.02
APOBEC3F-202ENST00000381565 WDR63Q8IWG1 891 aa14.95□□□□□ -0.02
APOBEC3F-202ENST00000381565 SMC1BQ8NDV3 1235 aa14.95□□□□□ -0.02
APOBEC3F-202ENST00000381565 MYH3P11055 1940 aa14.95□□□□□ -0.02
APOBEC3F-202ENST00000381565 FAM177BA6PVY3 158 aa14.94□□□□□ -0.02
APOBEC3F-202ENST00000381565 NTSR2O95665 410 aa14.94□□□□□ -0.02
APOBEC3F-202ENST00000381565 LMNB1P20700 586 aa14.94□□□□□ -0.02
APOBEC3F-202ENST00000381565 GLTPD2A6NH11 291 aa14.93□□□□□ -0.02
APOBEC3F-202ENST00000381565 POTECB2RU33 542 aa14.93□□□□□ -0.02
APOBEC3F-202ENST00000381565 H0YIN7 160 aa14.93□□□□□ -0.02
APOBEC3F-202ENST00000381565 PDE6BP35913 854 aa14.93□□□□□ -0.02
APOBEC3F-202ENST00000381565 SUSD4Q5VX71 490 aa14.93□□□□□ -0.02
APOBEC3F-202ENST00000381565 NUTM1Q86Y26 1132 aa14.93□□□□□ -0.02
APOBEC3F-202ENST00000381565 PHAXQ9H814 394 aaKnown RBP14.93□□□□□ -0.02
APOBEC3F-202ENST00000381565 KLRG2A4D1S0 409 aaPredicted RBP14.92□□□□□ -0.02
APOBEC3F-202ENST00000381565 SRGNP10124 158 aa14.92□□□□□ -0.02
APOBEC3F-202ENST00000381565 ERFEQ4G0M1 354 aa14.92□□□□□ -0.02
APOBEC3F-202ENST00000381565 TPTE2Q6XPS3 522 aa14.92□□□□□ -0.02
APOBEC3F-202ENST00000381565 TTLL6Q8N841 843 aa14.92□□□□□ -0.02
APOBEC3F-202ENST00000381565 HYPKQ9NX55 129 aa14.92□□□□□ -0.02
APOBEC3F-202ENST00000381565 COL4A1P02462 1669 aa14.91□□□□□ -0.02
APOBEC3F-202ENST00000381565 NPHP1O15259 732 aa14.91□□□□□ -0.02
APOBEC3F-202ENST00000381565 TWISTNBQ3B726 338 aaPredicted RBP14.91□□□□□ -0.02
APOBEC3F-202ENST00000381565 DIEXFQ68CQ4 756 aaKnown RBP14.91□□□□□ -0.02
APOBEC3F-202ENST00000381565 PLBD2Q8NHP8 589 aa14.91□□□□□ -0.02
APOBEC3F-202ENST00000381565 NYXQ9GZU5 481 aa14.91□□□□□ -0.02
APOBEC3F-202ENST00000381565 PDZRN3Q9UPQ7 1066 aa14.91□□□□□ -0.02
APOBEC3F-202ENST00000381565 LRRC37AA6NMS7 1700 aa14.91□□□□□ -0.02
APOBEC3F-202ENST00000381565 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
APOBEC3F-202ENST00000381565 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
APOBEC3F-202ENST00000381565 VEGFAP15692 232 aaPredicted RBP14.9□□□□□ -0.02
APOBEC3F-202ENST00000381565 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
APOBEC3F-202ENST00000381565 PARP10Q53GL7 1025 aa14.9□□□□□ -0.02
APOBEC3F-202ENST00000381565 NLRP10Q86W26 655 aa14.9□□□□□ -0.02
APOBEC3F-202ENST00000381565 SPEF2Q9C093 1822 aa14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 TCERG1O14776 1098 aaKnown RBP14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 EXOSC9Q06265 439 aaKnown RBP14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 TCIRG1Q13488 830 aa14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 CRY2Q49AN0 593 aa14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 STYK1Q6J9G0 422 aa14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 ANKRD13DQ6ZTN6 518 aa14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 C3orf67Q6ZVT6 689 aa14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 MIER1Q8N108 512 aa14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 ZNF622Q969S3 477 aaKnown RBP eCLIP14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 SNED1Q8TER0 1413 aa14.89□□□□□ -0.03
APOBEC3F-202ENST00000381565 HSP90AB3PQ58FF7 597 aa14.88□□□□□ -0.03
APOBEC3F-202ENST00000381565 MASTLQ96GX5 879 aa14.88□□□□□ -0.03
APOBEC3F-202ENST00000381565 ISCA1Q9BUE6 129 aa14.88□□□□□ -0.03
APOBEC3F-202ENST00000381565 RNF123Q5XPI4 1314 aa14.88□□□□□ -0.03
APOBEC3F-202ENST00000381565 VAMP4O75379 141 aa14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 HSPA1AP0DMV8 641 aaKnown RBP14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 HSPA1BP0DMV9 641 aaKnown RBP14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 NPR1P16066 1061 aa14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 PRPF40BQ6NWY9 871 aaKnown RBP14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 G2E3Q7L622 706 aa14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 PPP1R42Q7Z4L9 355 aa14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 TNS4Q8IZW8 715 aa14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 ZNF428Q96B54 188 aa14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 SSUH2Q9Y2M2 353 aa14.87□□□□□ -0.03
APOBEC3F-202ENST00000381565 GTF2E1P29083 439 aaPredicted RBP14.86□□□□□ -0.03
APOBEC3F-202ENST00000381565 GOLGA2Q08379 1002 aa14.86□□□□□ -0.03
APOBEC3F-202ENST00000381565 SYNE4Q8N205 404 aa14.86□□□□□ -0.03
APOBEC3F-202ENST00000381565 UTP14AQ9BVJ6 771 aaKnown RBP14.86□□□□□ -0.03
APOBEC3F-202ENST00000381565 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
APOBEC3F-202ENST00000381565 LTBP1Q14766 1721 aa14.86□□□□□ -0.03
APOBEC3F-202ENST00000381565 ATP5J2-PTCD1G3V325 749 aa14.85□□□□□ -0.03
APOBEC3F-202ENST00000381565 C21orf2O43822 256 aa14.85□□□□□ -0.03
APOBEC3F-202ENST00000381565 SLC10A5Q5PT55 438 aa14.85□□□□□ -0.03
APOBEC3F-202ENST00000381565 SLC51AQ86UW1 340 aa14.85□□□□□ -0.03
APOBEC3F-202ENST00000381565 C7orf43Q8WVR3 580 aa14.85□□□□□ -0.03
APOBEC3F-202ENST00000381565 CNKSR1Q969H4 720 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms