RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 GCKRQ14397 625 aa19.6■□□□□ 0.73
PDGFB-202ENST00000381551 PRR5LQ6MZQ0 368 aa19.6■□□□□ 0.73
PDGFB-202ENST00000381551 CLUAP1Q96AJ1 413 aa19.6■□□□□ 0.73
PDGFB-202ENST00000381551 TRMT112Q9UI30 125 aaKnown RBP19.6■□□□□ 0.73
PDGFB-202ENST00000381551 ABCC4O15439 1325 aa19.59■□□□□ 0.73
PDGFB-202ENST00000381551 CCT4P50991 539 aaKnown RBP19.59■□□□□ 0.73
PDGFB-202ENST00000381551 INTS3Q68E01 1043 aaKnown RBP19.59■□□□□ 0.73
PDGFB-202ENST00000381551 CNBD1Q8NA66 436 aa19.59■□□□□ 0.73
PDGFB-202ENST00000381551 IBTKQ9P2D0 1353 aaPredicted RBP19.58■□□□□ 0.73
PDGFB-202ENST00000381551 RNF123Q5XPI4 1314 aa19.58■□□□□ 0.73
PDGFB-202ENST00000381551 GTF2E1P29083 439 aaPredicted RBP19.58■□□□□ 0.72
PDGFB-202ENST00000381551 ERFEQ4G0M1 354 aa19.58■□□□□ 0.72
PDGFB-202ENST00000381551 SLC10A5Q5PT55 438 aa19.58■□□□□ 0.72
PDGFB-202ENST00000381551 NUTM1Q86Y26 1132 aa19.58■□□□□ 0.72
PDGFB-202ENST00000381551 DZIP1LQ8IYY4 767 aaKnown RBP19.58■□□□□ 0.72
PDGFB-202ENST00000381551 SYNE4Q8N205 404 aa19.58■□□□□ 0.72
PDGFB-202ENST00000381551 CCDC24Q8N4L8 307 aa19.58■□□□□ 0.72
PDGFB-202ENST00000381551 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.58■□□□□ 0.72
PDGFB-202ENST00000381551 ZBTB38Q8NAP3 1195 aaPredicted RBP19.58■□□□□ 0.72
PDGFB-202ENST00000381551 FAM89AQ96GI7 184 aa19.58■□□□□ 0.72
PDGFB-202ENST00000381551 LRP5O75197 1615 aa19.58■□□□□ 0.72
PDGFB-202ENST00000381551 SH3TC1Q8TE82 1336 aa19.57■□□□□ 0.72
PDGFB-202ENST00000381551 H7C1W4 665 aa19.57■□□□□ 0.72
PDGFB-202ENST00000381551 AFDNP55196 1824 aaKnown RBP19.57■□□□□ 0.72
PDGFB-202ENST00000381551 PXDNLA1KZ92 1463 aa19.56■□□□□ 0.72
PDGFB-202ENST00000381551 NPHP1O15259 732 aa19.56■□□□□ 0.72
PDGFB-202ENST00000381551 PCCAP05165 728 aaPredicted RBP19.56■□□□□ 0.72
PDGFB-202ENST00000381551 MS4A1P11836 297 aa19.56■□□□□ 0.72
PDGFB-202ENST00000381551 RLBP1P12271 317 aa19.56■□□□□ 0.72
PDGFB-202ENST00000381551 TMEM57Q8N5G2 664 aa19.56■□□□□ 0.72
PDGFB-202ENST00000381551 JARID2Q92833 1246 aaPredicted RBP19.56■□□□□ 0.72
PDGFB-202ENST00000381551 NRXN2Q9P2S2 1712 aa19.56■□□□□ 0.72
PDGFB-202ENST00000381551 ST5P78524 1137 aa19.55■□□□□ 0.72
PDGFB-202ENST00000381551 RTL5Q5HYW3 569 aaPredicted RBP19.55■□□□□ 0.72
PDGFB-202ENST00000381551 FTSJ3Q8IY81 847 aaKnown RBP19.55■□□□□ 0.72
PDGFB-202ENST00000381551 PANK1Q8TE04 598 aa19.55■□□□□ 0.72
PDGFB-202ENST00000381551 BRIP1Q9BX63 1249 aa19.55■□□□□ 0.72
PDGFB-202ENST00000381551 USP44Q9H0E7 712 aa19.55■□□□□ 0.72
PDGFB-202ENST00000381551 CD2APQ9Y5K6 639 aa19.55■□□□□ 0.72
PDGFB-202ENST00000381551 GRM8O00222 908 aa19.54■□□□□ 0.72
PDGFB-202ENST00000381551 CASP7P55210 303 aa19.54■□□□□ 0.72
PDGFB-202ENST00000381551 RRP1P56182 461 aaKnown RBP19.54■□□□□ 0.72
PDGFB-202ENST00000381551 PDE3AQ14432 1141 aa19.54■□□□□ 0.72
PDGFB-202ENST00000381551 C9orf78Q9NZ63 289 aaPredicted RBP19.54■□□□□ 0.72
PDGFB-202ENST00000381551 PPP1R1BQ9UD71 204 aaPredicted RBP19.53■□□□□ 0.72
PDGFB-202ENST00000381551 SUPT16HQ9Y5B9 1047 aaKnown RBP19.53■□□□□ 0.72
PDGFB-202ENST00000381551 UTYO14607 1347 aa19.52■□□□□ 0.72
PDGFB-202ENST00000381551 KLRG2A4D1S0 409 aaPredicted RBP19.52■□□□□ 0.72
PDGFB-202ENST00000381551 IRS4O14654 1257 aaPredicted RBP19.52■□□□□ 0.72
PDGFB-202ENST00000381551 NBPF7P0C2Y1 421 aaPredicted RBP19.52■□□□□ 0.72
PDGFB-202ENST00000381551 HCLS1P14317 486 aaPredicted RBP19.52■□□□□ 0.72
PDGFB-202ENST00000381551 C20orf194Q5TEA3 1177 aa19.52■□□□□ 0.72
PDGFB-202ENST00000381551 UBE3BQ7Z3V4 1068 aa19.52■□□□□ 0.72
PDGFB-202ENST00000381551 CDHR2Q9BYE9 1310 aa19.51■□□□□ 0.71
PDGFB-202ENST00000381551 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
PDGFB-202ENST00000381551 PDE6BP35913 854 aa19.51■□□□□ 0.71
PDGFB-202ENST00000381551 FHDC1Q9C0D6 1143 aaPredicted RBP19.51■□□□□ 0.71
PDGFB-202ENST00000381551 ABCC12Q96J65 1359 aa19.51■□□□□ 0.71
PDGFB-202ENST00000381551 TGFB2P61812 414 aa19.5■□□□□ 0.71
PDGFB-202ENST00000381551 C3orf67Q6ZVT6 689 aa19.5■□□□□ 0.71
PDGFB-202ENST00000381551 KLHL34Q8N239 644 aa19.5■□□□□ 0.71
PDGFB-202ENST00000381551 NLRP3Q96P20 1036 aa19.5■□□□□ 0.71
PDGFB-202ENST00000381551 ZBTB7BO15156 539 aaPredicted RBP19.49■□□□□ 0.71
PDGFB-202ENST00000381551 HSP90B1P14625 803 aaKnown RBP19.49■□□□□ 0.71
PDGFB-202ENST00000381551 SYT17Q9BSW7 474 aa19.49■□□□□ 0.71
PDGFB-202ENST00000381551 PLA2G12BQ9BX93 195 aa19.49■□□□□ 0.71
PDGFB-202ENST00000381551 RIC1Q4ADV7 1423 aa19.49■□□□□ 0.71
PDGFB-202ENST00000381551 PDE8AO60658 829 aa19.48■□□□□ 0.71
PDGFB-202ENST00000381551 CENPBP07199 599 aaPredicted RBP19.48■□□□□ 0.71
PDGFB-202ENST00000381551 ITPRIPQ8IWB1 547 aa19.48■□□□□ 0.71
PDGFB-202ENST00000381551 PDZRN3Q9UPQ7 1066 aa19.48■□□□□ 0.71
PDGFB-202ENST00000381551 COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
PDGFB-202ENST00000381551 N4BP2Q86UW6 1770 aaPredicted RBP19.47■□□□□ 0.71
PDGFB-202ENST00000381551 KIF13BQ9NQT8 1826 aa19.47■□□□□ 0.71
PDGFB-202ENST00000381551 A0A0G2JLW4 131 aa19.47■□□□□ 0.71
PDGFB-202ENST00000381551 H0YIN7 160 aa19.47■□□□□ 0.71
PDGFB-202ENST00000381551 DPEP1P16444 411 aa19.47■□□□□ 0.71
PDGFB-202ENST00000381551 MVPQ14764 893 aaKnown RBP19.47■□□□□ 0.71
PDGFB-202ENST00000381551 SF3B3Q15393 1217 aaKnown RBP19.47■□□□□ 0.71
PDGFB-202ENST00000381551 CRY2Q49AN0 593 aa19.47■□□□□ 0.71
PDGFB-202ENST00000381551 C2CD5Q86YS7 1000 aa19.47■□□□□ 0.71
PDGFB-202ENST00000381551 KAZALD1Q96I82 304 aa19.47■□□□□ 0.71
PDGFB-202ENST00000381551 MEIS3Q99687 375 aa19.47■□□□□ 0.71
PDGFB-202ENST00000381551 ANKRD31Q8N7Z5 1873 aa19.47■□□□□ 0.71
PDGFB-202ENST00000381551 SRGNP10124 158 aa19.46■□□□□ 0.71
PDGFB-202ENST00000381551 KCNA3P22001 575 aa19.46■□□□□ 0.71
PDGFB-202ENST00000381551 CHRNA5P30532 468 aa19.46■□□□□ 0.71
PDGFB-202ENST00000381551 FOXO4P98177 505 aa19.46■□□□□ 0.71
PDGFB-202ENST00000381551 EPHA10Q5JZY3 1008 aa19.46■□□□□ 0.71
PDGFB-202ENST00000381551 NLGN2Q8NFZ4 835 aa19.46■□□□□ 0.71
PDGFB-202ENST00000381551 SUCLG2Q96I99 432 aa19.46■□□□□ 0.71
PDGFB-202ENST00000381551 CSF1RP07333 972 aa19.45■□□□□ 0.7
PDGFB-202ENST00000381551 GNAI3P08754 354 aa19.45■□□□□ 0.7
PDGFB-202ENST00000381551 UBTFL1P0CB47 393 aaPredicted RBP19.45■□□□□ 0.7
PDGFB-202ENST00000381551 TTLL11Q8NHH1 800 aa19.45■□□□□ 0.7
PDGFB-202ENST00000381551 HOXA10P31260 410 aaPredicted RBP19.44■□□□□ 0.7
PDGFB-202ENST00000381551 DDX19BQ9UMR2 479 aa19.44■□□□□ 0.7
PDGFB-202ENST00000381551 HDAC5Q9UQL6 1122 aa19.44■□□□□ 0.7
PDGFB-202ENST00000381551 DDX60Q8IY21 1712 aaKnown RBP19.44■□□□□ 0.7
PDGFB-202ENST00000381551 NPR1P16066 1061 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms