RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 ST5P78524 1137 aa25.48■■□□□ 1.67
CDPF1-202ENST00000381037 ERFEQ4G0M1 354 aa25.48■■□□□ 1.67
CDPF1-202ENST00000381037 RNF123Q5XPI4 1314 aa25.47■■□□□ 1.67
CDPF1-202ENST00000381037 ABCC12Q96J65 1359 aa25.47■■□□□ 1.67
CDPF1-202ENST00000381037 F6X3S4 739 aa25.47■■□□□ 1.67
CDPF1-202ENST00000381037 DPEP1P16444 411 aa25.47■■□□□ 1.67
CDPF1-202ENST00000381037 CCDC191Q8NCU4 936 aa25.47■■□□□ 1.67
CDPF1-202ENST00000381037 SLC10A5Q5PT55 438 aa25.46■■□□□ 1.67
CDPF1-202ENST00000381037 PTPRCP08575 1304 aa25.46■■□□□ 1.67
CDPF1-202ENST00000381037 RIC1Q4ADV7 1423 aa25.46■■□□□ 1.67
CDPF1-202ENST00000381037 CHRNA5P30532 468 aa25.45■■□□□ 1.67
CDPF1-202ENST00000381037 SYNE4Q8N205 404 aa25.45■■□□□ 1.67
CDPF1-202ENST00000381037 TRMT112Q9UI30 125 aaKnown RBP25.45■■□□□ 1.67
CDPF1-202ENST00000381037 NPHP1O15259 732 aa25.45■■□□□ 1.66
CDPF1-202ENST00000381037 GTF2E1P29083 439 aaPredicted RBP25.45■■□□□ 1.66
CDPF1-202ENST00000381037 PDE6BP35913 854 aa25.45■■□□□ 1.66
CDPF1-202ENST00000381037 YTHDC1Q96MU7 727 aaKnown RBP25.45■■□□□ 1.66
CDPF1-202ENST00000381037 NEURL1BA8MQ27 555 aa25.44■■□□□ 1.66
CDPF1-202ENST00000381037 NEXNQ0ZGT2 675 aa25.44■■□□□ 1.66
CDPF1-202ENST00000381037 CWF19L2Q2TBE0 894 aaKnown RBP25.44■■□□□ 1.66
CDPF1-202ENST00000381037 N4BP2Q86UW6 1770 aaPredicted RBP25.44■■□□□ 1.66
CDPF1-202ENST00000381037 BEND3Q5T5X7 828 aa25.43■■□□□ 1.66
CDPF1-202ENST00000381037 LINS1Q8NG48 757 aa25.43■■□□□ 1.66
CDPF1-202ENST00000381037 CWC25Q9NXE8 425 aaPredicted RBP25.43■■□□□ 1.66
CDPF1-202ENST00000381037 SH3TC1Q8TE82 1336 aa25.43■■□□□ 1.66
CDPF1-202ENST00000381037 BCAR3O75815 825 aa25.42■■□□□ 1.66
CDPF1-202ENST00000381037 FAM89AQ96GI7 184 aa25.42■■□□□ 1.66
CDPF1-202ENST00000381037 NOB1Q9ULX3 412 aaKnown RBP25.42■■□□□ 1.66
CDPF1-202ENST00000381037 PDZRN3Q9UPQ7 1066 aa25.42■■□□□ 1.66
CDPF1-202ENST00000381037 C2CD5Q86YS7 1000 aa25.41■■□□□ 1.66
CDPF1-202ENST00000381037 H0YIN7 160 aa25.41■■□□□ 1.66
CDPF1-202ENST00000381037 SRGNP10124 158 aa25.41■■□□□ 1.66
CDPF1-202ENST00000381037 CRY2Q49AN0 593 aa25.41■■□□□ 1.66
CDPF1-202ENST00000381037 ZBTB38Q8NAP3 1195 aaPredicted RBP25.41■■□□□ 1.66
CDPF1-202ENST00000381037 TNRC6CQ9HCJ0 1690 aaKnown RBP25.4■■□□□ 1.66
CDPF1-202ENST00000381037 BRCA1P38398 1863 aaKnown RBP25.39■■□□□ 1.66
CDPF1-202ENST00000381037 PCCAP05165 728 aaPredicted RBP25.39■■□□□ 1.66
CDPF1-202ENST00000381037 GCKRQ14397 625 aa25.39■■□□□ 1.66
CDPF1-202ENST00000381037 C3orf67Q6ZVT6 689 aa25.39■■□□□ 1.66
CDPF1-202ENST00000381037 COL11A2P13942 1736 aaPredicted RBP25.38■■□□□ 1.65
CDPF1-202ENST00000381037 KIF16BQ96L93 1317 aa25.38■■□□□ 1.65
CDPF1-202ENST00000381037 ARHGAP45Q92619 1136 aa25.38■■□□□ 1.65
CDPF1-202ENST00000381037 PIM2Q9P1W9 311 aa25.38■■□□□ 1.65
CDPF1-202ENST00000381037 HCLS1P14317 486 aaPredicted RBP25.37■■□□□ 1.65
CDPF1-202ENST00000381037 DLEC1Q9Y238 1755 aa25.37■■□□□ 1.65
CDPF1-202ENST00000381037 H7C1W4 665 aa25.37■■□□□ 1.65
CDPF1-202ENST00000381037 YBX3P16989 372 aaKnown RBP eCLIP25.37■■□□□ 1.65
CDPF1-202ENST00000381037 RTL5Q5HYW3 569 aaPredicted RBP25.37■■□□□ 1.65
CDPF1-202ENST00000381037 SLC4A10Q6U841 1118 aa25.36■■□□□ 1.65
CDPF1-202ENST00000381037 CASP7P55210 303 aa25.35■■□□□ 1.65
CDPF1-202ENST00000381037 STYK1Q6J9G0 422 aa25.35■■□□□ 1.65
CDPF1-202ENST00000381037 JARID2Q92833 1246 aaPredicted RBP25.35■■□□□ 1.65
CDPF1-202ENST00000381037 MASTLQ96GX5 879 aa25.35■■□□□ 1.65
CDPF1-202ENST00000381037 NLRP3Q96P20 1036 aa25.35■■□□□ 1.65
CDPF1-202ENST00000381037 WWC3Q9ULE0 1092 aa25.35■■□□□ 1.65
CDPF1-202ENST00000381037 IRS4O14654 1257 aaPredicted RBP25.34■■□□□ 1.65
CDPF1-202ENST00000381037 ALDH1L1O75891 902 aa25.34■■□□□ 1.65
CDPF1-202ENST00000381037 HOXA10P31260 410 aaPredicted RBP25.34■■□□□ 1.65
CDPF1-202ENST00000381037 SRCIN1Q9C0H9 1055 aa25.34■■□□□ 1.65
CDPF1-202ENST00000381037 CDHR2Q9BYE9 1310 aa25.34■■□□□ 1.65
CDPF1-202ENST00000381037 DDX60Q8IY21 1712 aaKnown RBP25.34■■□□□ 1.65
CDPF1-202ENST00000381037 NPR1P16066 1061 aa25.34■■□□□ 1.65
CDPF1-202ENST00000381037 API5Q9BZZ5 524 aaKnown RBP25.34■■□□□ 1.65
CDPF1-202ENST00000381037 DALRD3Q5D0E6 543 aaKnown RBP25.33■■□□□ 1.65
CDPF1-202ENST00000381037 TTLL6Q8N841 843 aa25.32■■□□□ 1.64
CDPF1-202ENST00000381037 ZNF622Q969S3 477 aaKnown RBP eCLIP25.32■■□□□ 1.64
CDPF1-202ENST00000381037 IPO8O15397 1037 aaKnown RBP25.31■■□□□ 1.64
CDPF1-202ENST00000381037 TRIM27P14373 513 aa25.31■■□□□ 1.64
CDPF1-202ENST00000381037 SF3B3Q15393 1217 aaKnown RBP25.31■■□□□ 1.64
CDPF1-202ENST00000381037 GPR162Q16538 588 aa25.31■■□□□ 1.64
CDPF1-202ENST00000381037 UBE3BQ7Z3V4 1068 aa25.31■■□□□ 1.64
CDPF1-202ENST00000381037 BCS1LQ9Y276 419 aa25.31■■□□□ 1.64
CDPF1-202ENST00000381037 ATF7IPQ6VMQ6 1270 aa25.3■■□□□ 1.64
CDPF1-202ENST00000381037 FRAT1Q92837 279 aaPredicted RBP25.3■■□□□ 1.64
CDPF1-202ENST00000381037 CNKSR1Q969H4 720 aa25.3■■□□□ 1.64
CDPF1-202ENST00000381037 RCAN3Q9UKA8 241 aa25.3■■□□□ 1.64
CDPF1-202ENST00000381037 TNNQ9UQP3 1299 aa25.3■■□□□ 1.64
CDPF1-202ENST00000381037 LAMB2P55268 1798 aa25.29■■□□□ 1.64
CDPF1-202ENST00000381037 ABCC4O15439 1325 aa25.29■■□□□ 1.64
CDPF1-202ENST00000381037 GRM8O00222 908 aa25.29■■□□□ 1.64
CDPF1-202ENST00000381037 PELP1Q8IZL8 1130 aaKnown RBP25.29■■□□□ 1.64
CDPF1-202ENST00000381037 UTYO14607 1347 aa25.29■■□□□ 1.64
CDPF1-202ENST00000381037 PDE8AO60658 829 aa25.28■■□□□ 1.64
CDPF1-202ENST00000381037 HSP90B1P14625 803 aaKnown RBP25.28■■□□□ 1.64
CDPF1-202ENST00000381037 CRAMP1Q96RY5 1269 aa25.28■■□□□ 1.64
CDPF1-202ENST00000381037 PLA2G12BQ9BX93 195 aa25.28■■□□□ 1.64
CDPF1-202ENST00000381037 ALDH1B1P30837 517 aa25.27■■□□□ 1.64
CDPF1-202ENST00000381037 CCT4P50991 539 aaKnown RBP25.27■■□□□ 1.64
CDPF1-202ENST00000381037 ZKSCAN2Q63HK3 967 aa25.27■■□□□ 1.64
CDPF1-202ENST00000381037 PRPF40BQ6NWY9 871 aaKnown RBP25.27■■□□□ 1.64
CDPF1-202ENST00000381037 C7orf43Q8WVR3 580 aa25.27■■□□□ 1.64
CDPF1-202ENST00000381037 RPGRQ92834 1020 aaKnown RBP25.27■■□□□ 1.64
CDPF1-202ENST00000381037 GRIN3BO60391 1043 aa25.26■■□□□ 1.63
CDPF1-202ENST00000381037 INTS3Q68E01 1043 aaKnown RBP25.26■■□□□ 1.63
CDPF1-202ENST00000381037 USP44Q9H0E7 712 aa25.26■■□□□ 1.63
CDPF1-202ENST00000381037 SLX4Q8IY92 1834 aa25.25■■□□□ 1.63
CDPF1-202ENST00000381037 ARFGEF1Q9Y6D6 1849 aa25.25■■□□□ 1.63
CDPF1-202ENST00000381037 NBPF7P0C2Y1 421 aaPredicted RBP25.25■■□□□ 1.63
CDPF1-202ENST00000381037 RBM17Q96I25 401 aaKnown RBP25.25■■□□□ 1.63
CDPF1-202ENST00000381037 C9orf78Q9NZ63 289 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms