RNA–Protein interactions for RNA: ENST00000380992.5

TSSC4-202, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSSC4, Length 992 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-202ENST00000380992 ABCC12Q96J65 1359 aa21.37■■□□□ 1.01
TSSC4-202ENST00000380992 RNF123Q5XPI4 1314 aa21.37■■□□□ 1.01
TSSC4-202ENST00000380992 ANXA1P04083 346 aa21.37■■□□□ 1.01
TSSC4-202ENST00000380992 RTKN2Q8IZC4 609 aa21.37■■□□□ 1.01
TSSC4-202ENST00000380992 MBIPQ9NS73 344 aa21.37■■□□□ 1.01
TSSC4-202ENST00000380992 IFT57Q9NWB7 429 aa21.37■■□□□ 1.01
TSSC4-202ENST00000380992 DBF4Q9UBU7 674 aaPredicted RBP21.37■■□□□ 1.01
TSSC4-202ENST00000380992 WDR90Q96KV7 1748 aa21.36■■□□□ 1.01
TSSC4-202ENST00000380992 VEGFAP15692 232 aaPredicted RBP21.36■■□□□ 1.01
TSSC4-202ENST00000380992 GNAI1P63096 354 aa21.36■■□□□ 1.01
TSSC4-202ENST00000380992 FSTL1Q12841 308 aa21.36■■□□□ 1.01
TSSC4-202ENST00000380992 XAGE3Q8WTP9 111 aa21.36■■□□□ 1.01
TSSC4-202ENST00000380992 FKBP4Q02790 459 aaKnown RBP eCLIP21.35■■□□□ 1.01
TSSC4-202ENST00000380992 TCIRG1Q13488 830 aa21.35■■□□□ 1.01
TSSC4-202ENST00000380992 GRIPAP1Q4V328 841 aa21.35■■□□□ 1.01
TSSC4-202ENST00000380992 HDGFL1Q5TGJ6 251 aa21.35■■□□□ 1.01
TSSC4-202ENST00000380992 CC2D2BQ6DHV5 1058 aa21.35■■□□□ 1.01
TSSC4-202ENST00000380992 NECTIN2Q92692 538 aa21.35■■□□□ 1.01
TSSC4-202ENST00000380992 UTP14AQ9BVJ6 771 aaKnown RBP21.35■■□□□ 1.01
TSSC4-202ENST00000380992 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
TSSC4-202ENST00000380992 DUSP27Q5VZP5 1158 aa21.34■■□□□ 1.01
TSSC4-202ENST00000380992 CRAMP1Q96RY5 1269 aa21.34■■□□□ 1.01
TSSC4-202ENST00000380992 CHPF2Q9P2E5 772 aa21.34■■□□□ 1.01
TSSC4-202ENST00000380992 APLP1P51693 650 aa21.33■■□□□ 1.01
TSSC4-202ENST00000380992 AIMP1Q12904 312 aaKnown RBP21.33■■□□□ 1.01
TSSC4-202ENST00000380992 RPGRQ92834 1020 aaKnown RBP21.33■■□□□ 1.01
TSSC4-202ENST00000380992 NLRP3Q96P20 1036 aa21.33■■□□□ 1.01
TSSC4-202ENST00000380992 HYPKQ9NX55 129 aa21.33■■□□□ 1.01
TSSC4-202ENST00000380992 SNED1Q8TER0 1413 aa21.32■■□□□ 1
TSSC4-202ENST00000380992 CCDC27Q2M243 656 aa21.32■■□□□ 1
TSSC4-202ENST00000380992 ANKRD13DQ6ZTN6 518 aa21.32■■□□□ 1
TSSC4-202ENST00000380992 PLBD2Q8NHP8 589 aa21.32■■□□□ 1
TSSC4-202ENST00000380992 CHMP4AQ9BY43 222 aa21.32■■□□□ 1
TSSC4-202ENST00000380992 POTECB2RU33 542 aa21.31■■□□□ 1
TSSC4-202ENST00000380992 NLRP10Q86W26 655 aa21.31■■□□□ 1
TSSC4-202ENST00000380992 RBM17Q96I25 401 aaKnown RBP21.31■■□□□ 1
TSSC4-202ENST00000380992 PSMD1Q99460 953 aa21.31■■□□□ 1
TSSC4-202ENST00000380992 FAM9BQ8IZU0 186 aa21.3■■□□□ 1
TSSC4-202ENST00000380992 LAMB2P55268 1798 aa21.29■■□□□ 1
TSSC4-202ENST00000380992 WWC1Q8IX03 1113 aa21.29■■□□□ 1
TSSC4-202ENST00000380992 SMC1BQ8NDV3 1235 aa21.29■■□□□ 1
TSSC4-202ENST00000380992 OLFM4Q6UX06 510 aa21.28■■□□□ 1
TSSC4-202ENST00000380992 SYNE4Q8N205 404 aa21.28■■□□□ 1
TSSC4-202ENST00000380992 SCN4AP35499 1836 aa21.27■■□□□ 1
TSSC4-202ENST00000380992 TRIM28Q13263 835 aaKnown RBP21.27■■□□□ 1
TSSC4-202ENST00000380992 ISCA1Q9BUE6 129 aa21.27■■□□□ 1
TSSC4-202ENST00000380992 SH3TC1Q8TE82 1336 aa21.27■□□□□ 0.99
TSSC4-202ENST00000380992 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
TSSC4-202ENST00000380992 C3orf67Q6ZVT6 689 aa21.26■□□□□ 0.99
TSSC4-202ENST00000380992 ZNF277Q9NRM2 450 aaPredicted RBP21.26■□□□□ 0.99
TSSC4-202ENST00000380992 TRMT112Q9UI30 125 aaKnown RBP21.26■□□□□ 0.99
TSSC4-202ENST00000380992 CCER2I3L3R5 266 aa21.25■□□□□ 0.99
TSSC4-202ENST00000380992 DDNO94850 711 aaPredicted RBP21.25■□□□□ 0.99
TSSC4-202ENST00000380992 L3MBTL3Q96JM7 780 aaPredicted RBP21.25■□□□□ 0.99
TSSC4-202ENST00000380992 FZD9O00144 591 aa21.24■□□□□ 0.99
TSSC4-202ENST00000380992 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
TSSC4-202ENST00000380992 BBOX1O75936 387 aa21.24■□□□□ 0.99
TSSC4-202ENST00000380992 DNAJC5GQ8N7S2 189 aa21.24■□□□□ 0.99
TSSC4-202ENST00000380992 C8orf58Q8NAV2 365 aa21.24■□□□□ 0.99
TSSC4-202ENST00000380992 VPS33BQ9H267 617 aa21.24■□□□□ 0.99
TSSC4-202ENST00000380992 CCDC30Q5VVM6 783 aa21.23■□□□□ 0.99
TSSC4-202ENST00000380992 DIEXFQ68CQ4 756 aaKnown RBP21.23■□□□□ 0.99
TSSC4-202ENST00000380992 ATP6V0A2Q9Y487 856 aa21.23■□□□□ 0.99
TSSC4-202ENST00000380992 DDX60Q8IY21 1712 aaKnown RBP21.23■□□□□ 0.99
TSSC4-202ENST00000380992 IL16Q14005 1332 aa21.23■□□□□ 0.99
TSSC4-202ENST00000380992 IQCA1LA6NCM1 817 aa21.22■□□□□ 0.99
TSSC4-202ENST00000380992 ELL2O00472 640 aaPredicted RBP21.22■□□□□ 0.99
TSSC4-202ENST00000380992 TMX4Q9H1E5 349 aaPredicted RBP21.22■□□□□ 0.99
TSSC4-202ENST00000380992 ABCC4O15439 1325 aa21.22■□□□□ 0.99
TSSC4-202ENST00000380992 HCLS1P14317 486 aaPredicted RBP21.21■□□□□ 0.99
TSSC4-202ENST00000380992 SP8Q8IXZ3 490 aa21.21■□□□□ 0.99
TSSC4-202ENST00000380992 JDP2Q8WYK2 163 aa21.21■□□□□ 0.99
TSSC4-202ENST00000380992 SALL2Q9Y467 1007 aaPredicted RBP21.21■□□□□ 0.99
TSSC4-202ENST00000380992 GOLGA2Q08379 1002 aa21.2■□□□□ 0.98
TSSC4-202ENST00000380992 RIC3Q7Z5B4 369 aa21.2■□□□□ 0.98
TSSC4-202ENST00000380992 PHAXQ9H814 394 aaKnown RBP21.2■□□□□ 0.98
TSSC4-202ENST00000380992 SF3B3Q15393 1217 aaKnown RBP21.19■□□□□ 0.98
TSSC4-202ENST00000380992 DDX46Q7L014 1031 aaKnown RBP21.19■□□□□ 0.98
TSSC4-202ENST00000380992 TMC4Q7Z404 712 aa21.19■□□□□ 0.98
TSSC4-202ENST00000380992 GPC2Q8N158 579 aa21.19■□□□□ 0.98
TSSC4-202ENST00000380992 RTFDC1Q9BY42 306 aaPredicted RBP21.19■□□□□ 0.98
TSSC4-202ENST00000380992 CACNA1FO60840 1977 aa21.19■□□□□ 0.98
TSSC4-202ENST00000380992 TAF1P21675 1872 aa21.18■□□□□ 0.98
TSSC4-202ENST00000380992 ATP5J2-PTCD1G3V325 749 aa21.18■□□□□ 0.98
TSSC4-202ENST00000380992 GRAPQ13588 217 aa21.18■□□□□ 0.98
TSSC4-202ENST00000380992 WDR63Q8IWG1 891 aa21.18■□□□□ 0.98
TSSC4-202ENST00000380992 MIER1Q8N108 512 aa21.18■□□□□ 0.98
TSSC4-202ENST00000380992 TSPYL6Q8N831 410 aa21.18■□□□□ 0.98
TSSC4-202ENST00000380992 SUPT20HQ8NEM7 779 aa21.18■□□□□ 0.98
TSSC4-202ENST00000380992 GRAPLQ8TC17 118 aaPredicted RBP21.18■□□□□ 0.98
TSSC4-202ENST00000380992 TSR2Q969E8 191 aaKnown RBP21.18■□□□□ 0.98
TSSC4-202ENST00000380992 FAM89AQ96GI7 184 aa21.18■□□□□ 0.98
TSSC4-202ENST00000380992 DDX58O95786 925 aaKnown RBP21.17■□□□□ 0.98
TSSC4-202ENST00000380992 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
TSSC4-202ENST00000380992 ZNF521Q96K83 1311 aa21.17■□□□□ 0.98
TSSC4-202ENST00000380992 ZNF541Q9H0D2 1346 aa21.17■□□□□ 0.98
TSSC4-202ENST00000380992 HSP90B1P14625 803 aaKnown RBP21.16■□□□□ 0.98
TSSC4-202ENST00000380992 CHADLQ6NUI6 762 aa21.16■□□□□ 0.98
TSSC4-202ENST00000380992 ZBTB38Q8NAP3 1195 aaPredicted RBP21.16■□□□□ 0.98
TSSC4-202ENST00000380992 CCDC191Q8NCU4 936 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms