RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 GBP7Q8N8V2 638 aaPredicted RBP12.35□□□□□ -0.43
CLCN4-202ENST00000380833 TAF4BQ92750 862 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLCN4-202ENST00000380833 ZNF408Q9H9D4 720 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
CLCN4-202ENST00000380833 STARD3NLO95772 234 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 USP6NLQ92738 828 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 ARHGAP25P42331 645 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 MCM6Q14566 821 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
CLCN4-202ENST00000380833 CCDC178Q5BJE1 867 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 GTF3C6Q969F1 213 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 TUBB4AP04350 444 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 MXRA7P84157 204 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
CLCN4-202ENST00000380833 PDCD7Q8N8D1 485 aaKnown RBP12.34□□□□□ -0.43
CLCN4-202ENST00000380833 MYRIPQ8NFW9 859 aa12.34□□□□□ -0.43
CLCN4-202ENST00000380833 MAATS1Q7Z4T9 603 aa12.33□□□□□ -0.43
CLCN4-202ENST00000380833 ZBTB3Q9H5J0 574 aa12.33□□□□□ -0.43
CLCN4-202ENST00000380833 MIER3Q7Z3K6 550 aa12.33□□□□□ -0.44
CLCN4-202ENST00000380833 PANK2Q9BZ23 570 aa12.33□□□□□ -0.44
CLCN4-202ENST00000380833 IQSEC3Q9UPP2 1182 aaPredicted RBP12.33□□□□□ -0.44
CLCN4-202ENST00000380833 KRT85P78386 507 aa12.33□□□□□ -0.44
CLCN4-202ENST00000380833 MAP7D1Q3KQU3 841 aa12.33□□□□□ -0.44
CLCN4-202ENST00000380833 PDRG1Q9NUG6 133 aa12.33□□□□□ -0.44
CLCN4-202ENST00000380833 ZNF444Q8N0Y2 327 aaPredicted RBP12.33□□□□□ -0.44
CLCN4-202ENST00000380833 FERMT2Q96AC1 680 aa12.33□□□□□ -0.44
CLCN4-202ENST00000380833 AKNAD1Q5T1N1 836 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 EP400NLQ6ZTU2 488 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 EXOC6BQ9Y2D4 811 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 ISM2Q6H9L7 571 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 CPLX3Q8WVH0 158 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 CNTLNQ9NXG0 1405 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 ARHGAP5Q13017 1502 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 NBPF6Q5VWK0 638 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 NBPF5PQ86XG9 351 aaPredicted RBP12.32□□□□□ -0.44
CLCN4-202ENST00000380833 RGS22Q8NE09 1264 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 NBPF4Q96M43 638 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 STIM2Q9P246 746 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 HIP1O00291 1037 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 ZSCAN26Q16670 478 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 CCDC40Q4G0X9 1142 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 ZSCAN25Q6NSZ9 544 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 GBP5Q96PP8 586 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 LUC7L3O95232 432 aaKnown RBP12.32□□□□□ -0.44
CLCN4-202ENST00000380833 ERCC3P19447 782 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 CASTP20810 708 aaKnown RBP12.32□□□□□ -0.44
CLCN4-202ENST00000380833 PPP1R12CQ9BZL4 782 aa12.32□□□□□ -0.44
CLCN4-202ENST00000380833 CEBPAP49715 358 aaPredicted RBP12.32□□□□□ -0.44
CLCN4-202ENST00000380833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLCN4-202ENST00000380833 CCDC8Q9H0W5 538 aaPredicted RBP12.32□□□□□ -0.44
CLCN4-202ENST00000380833 CTNNA2P26232 953 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 WAPLQ7Z5K2 1190 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 CUL5Q93034 780 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 FOXO3O43524 673 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 TUBB4BP68371 445 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 PICALMQ13492 652 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 ATP2B3Q16720 1220 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 GSTTP1A0A1W2PQM5 241 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 DIXDC1Q155Q3 683 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 SPECC1Q5M775 1068 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 SPATA32Q96LK8 384 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 UIMC1Q96RL1 719 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 ZC4H2Q9NQZ6 224 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 TPX2Q9ULW0 747 aaKnown RBP12.31□□□□□ -0.44
CLCN4-202ENST00000380833 FAM76AQ8TAV0 307 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 BICD1Q96G01 975 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 CHRNA2Q15822 529 aa12.31□□□□□ -0.44
CLCN4-202ENST00000380833 NAA15Q9BXJ9 866 aaKnown RBP12.31□□□□□ -0.44
CLCN4-202ENST00000380833 LOC102724159A0A0B4J2E5 919 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 RNF8O76064 485 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 PWP2Q15269 919 aaKnown RBP12.3□□□□□ -0.44
CLCN4-202ENST00000380833 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 JAG2Q9Y219 1238 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 ZNF652Q9Y2D9 606 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 JRKLQ9Y4A0 524 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 BLOC1S2Q6QNY1 142 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 INF2Q27J81 1249 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 TCERG1LQ5VWI1 586 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 ICE2Q659A1 982 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 JMYQ8N9B5 988 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 STAC3Q96MF2 364 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 SLC8A1P32418 973 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 SP4Q02446 784 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 CTCFLQ8NI51 663 aaPredicted RBP12.3□□□□□ -0.44
CLCN4-202ENST00000380833 SMIM24O75264 130 aa12.3□□□□□ -0.44
CLCN4-202ENST00000380833 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
CLCN4-202ENST00000380833 CCDC65Q8IXS2 484 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 RFC4P35249 363 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 PAFAH1B1P43034 410 aa12.29□□□□□ -0.44
CLCN4-202ENST00000380833 CCT2P78371 535 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms