RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SRCIN1Q9C0H9 1055 aa16.05■□□□□ 0.16
SMN1-202ENST00000380707 CWC25Q9NXE8 425 aaPredicted RBP16.05■□□□□ 0.16
SMN1-202ENST00000380707 UTRNP46939 3433 aa16.05■□□□□ 0.16
SMN1-202ENST00000380707 RLBP1P12271 317 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 KCNA4P22459 653 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 GCKRQ14397 625 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 PRR5LQ6MZQ0 368 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 TPTE2Q6XPS3 522 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 PPP1R42Q7Z4L9 355 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 NUTM1Q86Y26 1132 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 SYNE4Q8N205 404 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 CCDC24Q8N4L8 307 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 UTP14AQ9BVJ6 771 aaKnown RBP16.04■□□□□ 0.16
SMN1-202ENST00000380707 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
SMN1-202ENST00000380707 PXDNLA1KZ92 1463 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 DZIP1LQ8IYY4 767 aaKnown RBP16.04■□□□□ 0.16
SMN1-202ENST00000380707 CNBD1Q8NA66 436 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 NYXQ9GZU5 481 aa16.04■□□□□ 0.16
SMN1-202ENST00000380707 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
SMN1-202ENST00000380707 ALDH1L1O75891 902 aa16.03■□□□□ 0.16
SMN1-202ENST00000380707 CCT4P50991 539 aaKnown RBP16.03■□□□□ 0.16
SMN1-202ENST00000380707 RRP1P56182 461 aaKnown RBP16.03■□□□□ 0.16
SMN1-202ENST00000380707 ERFEQ4G0M1 354 aa16.03■□□□□ 0.16
SMN1-202ENST00000380707 RTL5Q5HYW3 569 aaPredicted RBP16.03■□□□□ 0.16
SMN1-202ENST00000380707 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
SMN1-202ENST00000380707 INTS3Q68E01 1043 aaKnown RBP16.03■□□□□ 0.16
SMN1-202ENST00000380707 FTSJ3Q8IY81 847 aaKnown RBP16.03■□□□□ 0.16
SMN1-202ENST00000380707 TMEM57Q8N5G2 664 aa16.03■□□□□ 0.16
SMN1-202ENST00000380707 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.03■□□□□ 0.16
SMN1-202ENST00000380707 PANK1Q8TE04 598 aa16.03■□□□□ 0.16
SMN1-202ENST00000380707 JARID2Q92833 1246 aaPredicted RBP16.03■□□□□ 0.16
SMN1-202ENST00000380707 IBTKQ9P2D0 1353 aaPredicted RBP16.02■□□□□ 0.16
SMN1-202ENST00000380707 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.16
SMN1-202ENST00000380707 NPHP1O15259 732 aa16.02■□□□□ 0.15
SMN1-202ENST00000380707 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.15
SMN1-202ENST00000380707 ZBTB38Q8NAP3 1195 aaPredicted RBP16.02■□□□□ 0.15
SMN1-202ENST00000380707 SUPT16HQ9Y5B9 1047 aaKnown RBP16.02■□□□□ 0.15
SMN1-202ENST00000380707 SH3TC1Q8TE82 1336 aa16.01■□□□□ 0.15
SMN1-202ENST00000380707 H7C1W4 665 aa16■□□□□ 0.15
SMN1-202ENST00000380707 PCCAP05165 728 aaPredicted RBP16■□□□□ 0.15
SMN1-202ENST00000380707 ST5P78524 1137 aa16■□□□□ 0.15
SMN1-202ENST00000380707 UBE3BQ7Z3V4 1068 aa16■□□□□ 0.15
SMN1-202ENST00000380707 USP44Q9H0E7 712 aa16■□□□□ 0.15
SMN1-202ENST00000380707 RNF123Q5XPI4 1314 aa16■□□□□ 0.15
SMN1-202ENST00000380707 ABCC12Q96J65 1359 aa16■□□□□ 0.15
SMN1-202ENST00000380707 GRM8O00222 908 aa15.99■□□□□ 0.15
SMN1-202ENST00000380707 NBPF7P0C2Y1 421 aaPredicted RBP15.99■□□□□ 0.15
SMN1-202ENST00000380707 MS4A1P11836 297 aa15.99■□□□□ 0.15
SMN1-202ENST00000380707 CASP7P55210 303 aa15.99■□□□□ 0.15
SMN1-202ENST00000380707 C9orf78Q9NZ63 289 aaPredicted RBP15.99■□□□□ 0.15
SMN1-202ENST00000380707 N4BP2Q86UW6 1770 aaPredicted RBP15.99■□□□□ 0.15
SMN1-202ENST00000380707 C10orf71Q711Q0 1435 aa15.99■□□□□ 0.15
SMN1-202ENST00000380707 HCLS1P14317 486 aaPredicted RBP15.99■□□□□ 0.15
SMN1-202ENST00000380707 PDE3AQ14432 1141 aa15.99■□□□□ 0.15
SMN1-202ENST00000380707 SLC10A5Q5PT55 438 aa15.99■□□□□ 0.15
SMN1-202ENST00000380707 PPP1R1BQ9UD71 204 aaPredicted RBP15.99■□□□□ 0.15
SMN1-202ENST00000380707 IRS4O14654 1257 aaPredicted RBP15.98■□□□□ 0.15
SMN1-202ENST00000380707 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
SMN1-202ENST00000380707 ITPRIPQ8IWB1 547 aa15.98■□□□□ 0.15
SMN1-202ENST00000380707 BRIP1Q9BX63 1249 aa15.98■□□□□ 0.15
SMN1-202ENST00000380707 UTYO14607 1347 aa15.97■□□□□ 0.15
SMN1-202ENST00000380707 CDHR2Q9BYE9 1310 aa15.97■□□□□ 0.15
SMN1-202ENST00000380707 C3orf67Q6ZVT6 689 aa15.97■□□□□ 0.15
SMN1-202ENST00000380707 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
SMN1-202ENST00000380707 MEIS3Q99687 375 aa15.97■□□□□ 0.15
SMN1-202ENST00000380707 COG6Q9Y2V7 657 aa15.97■□□□□ 0.15
SMN1-202ENST00000380707 FHDC1Q9C0D6 1143 aaPredicted RBP15.96■□□□□ 0.15
SMN1-202ENST00000380707 CD2APQ9Y5K6 639 aa15.96■□□□□ 0.15
SMN1-202ENST00000380707 LRP5O75197 1615 aa15.96■□□□□ 0.15
SMN1-202ENST00000380707 ANKRD31Q8N7Z5 1873 aa15.95■□□□□ 0.14
SMN1-202ENST00000380707 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
SMN1-202ENST00000380707 MVPQ14764 893 aaKnown RBP15.95■□□□□ 0.14
SMN1-202ENST00000380707 TNRC6CQ9HCJ0 1690 aaKnown RBP15.95■□□□□ 0.14
SMN1-202ENST00000380707 KIF13BQ9NQT8 1826 aa15.95■□□□□ 0.14
SMN1-202ENST00000380707 ZBTB7BO15156 539 aaPredicted RBP15.94■□□□□ 0.14
SMN1-202ENST00000380707 PDE6BP35913 854 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 KAZALD1Q96I82 304 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 NLRP3Q96P20 1036 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 DDX60Q8IY21 1712 aaKnown RBP15.94■□□□□ 0.14
SMN1-202ENST00000380707 RIC1Q4ADV7 1423 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 PDE8AO60658 829 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 CHRNA5P30532 468 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 EPHA10Q5JZY3 1008 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 NLGN2Q8NFZ4 835 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 SUCLG2Q96I99 432 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 PLA2G12BQ9BX93 195 aa15.94■□□□□ 0.14
SMN1-202ENST00000380707 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
SMN1-202ENST00000380707 UBTFL1P0CB47 393 aaPredicted RBP15.93■□□□□ 0.14
SMN1-202ENST00000380707 HSP90B1P14625 803 aaKnown RBP15.93■□□□□ 0.14
SMN1-202ENST00000380707 TGFB2P61812 414 aa15.93■□□□□ 0.14
SMN1-202ENST00000380707 FOXO4P98177 505 aa15.93■□□□□ 0.14
SMN1-202ENST00000380707 CRY2Q49AN0 593 aa15.93■□□□□ 0.14
SMN1-202ENST00000380707 C2CD5Q86YS7 1000 aa15.93■□□□□ 0.14
SMN1-202ENST00000380707 SYT17Q9BSW7 474 aa15.93■□□□□ 0.14
SMN1-202ENST00000380707 GNAI3P08754 354 aa15.92■□□□□ 0.14
SMN1-202ENST00000380707 SRGNP10124 158 aa15.92■□□□□ 0.14
SMN1-202ENST00000380707 DPEP1P16444 411 aa15.92■□□□□ 0.14
SMN1-202ENST00000380707 KCNA3P22001 575 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms