RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 CCDC144CPQ8IYA2 1237 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 CDC42BPBQ9Y5S2 1711 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 H3BQF6 201 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 CTAGE5O15320 804 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 CDC45O75419 566 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 CT47B1P0C2W7 299 aaPredicted RBP7.72□□□□□ -1.17
RIPK1-202ENST00000380409 ERCC6LQ2NKX8 1250 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 C1QTNF12Q5T7M4 302 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 RBM43Q6ZSC3 357 aaKnown RBP7.72□□□□□ -1.17
RIPK1-202ENST00000380409 TADA2BQ86TJ2 420 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 XAGE2Q96GT9 111 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 TMX3Q96JJ7 454 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 NRBP1Q9UHY1 535 aa7.72□□□□□ -1.17
RIPK1-202ENST00000380409 RGS12O14924 1447 aa7.71□□□□□ -1.17
RIPK1-202ENST00000380409 TRIM27P14373 513 aa7.71□□□□□ -1.17
RIPK1-202ENST00000380409 IRX1P78414 480 aaPredicted RBP7.71□□□□□ -1.17
RIPK1-202ENST00000380409 DDR1Q08345 913 aa7.71□□□□□ -1.17
RIPK1-202ENST00000380409 CCDC186Q7Z3E2 898 aa7.71□□□□□ -1.17
RIPK1-202ENST00000380409 DZIP1LQ8IYY4 767 aaKnown RBP7.71□□□□□ -1.17
RIPK1-202ENST00000380409 THEMISQ8N1K5 641 aaPredicted RBP7.71□□□□□ -1.17
RIPK1-202ENST00000380409 GPS2Q13227 327 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 ZKSCAN2Q63HK3 967 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 ZCCHC17Q9NP64 241 aaKnown RBP7.71□□□□□ -1.18
RIPK1-202ENST00000380409 DDX19BQ9UMR2 479 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 ZNF330Q9Y3S2 320 aaPredicted RBP7.71□□□□□ -1.18
RIPK1-202ENST00000380409 NEURL4Q96JN8 1562 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 ATP7AQ04656 1500 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 KIF2AO00139 706 aaPredicted RBP7.71□□□□□ -1.18
RIPK1-202ENST00000380409 LIG1P18858 919 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 SSR1P43307 286 aaKnown RBP7.71□□□□□ -1.18
RIPK1-202ENST00000380409 ZNF75DP51815 510 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 MKL1Q969V6 931 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 PRAM1Q96QH2 718 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 FUT8Q9BYC5 575 aa7.71□□□□□ -1.18
RIPK1-202ENST00000380409 PTCH1Q13635 1447 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 ANKRD18BA2A2Z9 1011 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 FANCGO15287 622 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 CC2D1AQ6P1N0 951 aaPredicted RBP7.7□□□□□ -1.18
RIPK1-202ENST00000380409 RIMS1Q86UR5 1692 aaKnown RBP7.7□□□□□ -1.18
RIPK1-202ENST00000380409 ERCC3P19447 782 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 ADCY2Q08462 1091 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 SMC1AQ14683 1233 aaKnown RBP7.7□□□□□ -1.18
RIPK1-202ENST00000380409 LRRC8AQ8IWT6 810 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 KCTD17Q8N5Z5 321 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 SPC24Q8NBT2 197 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 TDRD7Q8NHU6 1098 aaKnown RBP7.7□□□□□ -1.18
RIPK1-202ENST00000380409 MRVI1Q9Y6F6 885 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 ABCC1P33527 1531 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 HTATSF1O43719 755 aaKnown RBP7.7□□□□□ -1.18
RIPK1-202ENST00000380409 TADA3O75528 432 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 LTKP29376 864 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 CCAR2Q8N163 923 aaKnown RBP7.7□□□□□ -1.18
RIPK1-202ENST00000380409 FAM200AQ8TCP9 573 aa7.7□□□□□ -1.18
RIPK1-202ENST00000380409 MKRN1Q9UHC7 482 aaKnown RBP7.7□□□□□ -1.18
RIPK1-202ENST00000380409 ABCC11Q96J66 1382 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 PREX2Q70Z35 1606 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 KCNJ6P48051 423 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 MRPL12P52815 198 aaKnown RBP7.69□□□□□ -1.18
RIPK1-202ENST00000380409 UBE2HP62256 183 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 NGDNQ8NEJ9 315 aaKnown RBP7.69□□□□□ -1.18
RIPK1-202ENST00000380409 IFT57Q9NWB7 429 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 ETAA1Q9NY74 926 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 TNRQ92752 1358 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 ANKRD26Q9UPS8 1709 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 SMC2O95347 1197 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 ADRA2BP18089 450 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 GPTP24298 496 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 ICA1Q05084 483 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 NUTM2GQ5VZR2 741 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 ISM2Q6H9L7 571 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 SARM1Q6SZW1 724 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 LRRC31Q6UY01 552 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 PROSER2Q86WR7 435 aaPredicted RBP7.69□□□□□ -1.18
RIPK1-202ENST00000380409 AK7Q96M32 723 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 ARHGEF40Q8TER5 1519 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 N4BP2Q86UW6 1770 aaPredicted RBP7.69□□□□□ -1.18
RIPK1-202ENST00000380409 A0A087WUV0 522 aaPredicted RBP7.69□□□□□ -1.18
RIPK1-202ENST00000380409 POLR3GO15318 223 aaPredicted RBP7.69□□□□□ -1.18
RIPK1-202ENST00000380409 HNRNPH1P31943 449 aaKnown RBP7.69□□□□□ -1.18
RIPK1-202ENST00000380409 CCDC158Q5M9N0 1113 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 KCNB2Q92953 911 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 GNL3LQ9NVN8 582 aaKnown RBP7.69□□□□□ -1.18
RIPK1-202ENST00000380409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.69□□□□□ -1.187e-6■■■■□ 21
RIPK1-202ENST00000380409 IFT172Q9UG01 1749 aa7.69□□□□□ -1.18
RIPK1-202ENST00000380409 ATXN2Q99700 1313 aaKnown RBP7.68□□□□□ -1.18
RIPK1-202ENST00000380409 TPD52L1Q16890 204 aaPredicted RBP7.68□□□□□ -1.18
RIPK1-202ENST00000380409 WLSQ5T9L3 541 aa7.68□□□□□ -1.18
RIPK1-202ENST00000380409 CPLX2Q6PUV4 134 aaKnown RBP7.68□□□□□ -1.18
RIPK1-202ENST00000380409 ZNF483Q8TF39 744 aaPredicted RBP7.68□□□□□ -1.18
RIPK1-202ENST00000380409 GCC1Q96CN9 775 aa7.68□□□□□ -1.18
RIPK1-202ENST00000380409 SOS1Q07889 1333 aaPredicted RBP7.68□□□□□ -1.18
RIPK1-202ENST00000380409 NEMFO60524 1076 aa7.68□□□□□ -1.18
RIPK1-202ENST00000380409 SEC31AO94979 1220 aaKnown RBP7.68□□□□□ -1.18
RIPK1-202ENST00000380409 AMPHP49418 695 aa7.68□□□□□ -1.18
RIPK1-202ENST00000380409 GNAI1P63096 354 aa7.68□□□□□ -1.18
RIPK1-202ENST00000380409 EXOSC9Q06265 439 aaKnown RBP7.68□□□□□ -1.18
RIPK1-202ENST00000380409 SLC5A9Q2M3M2 681 aa7.68□□□□□ -1.18
RIPK1-202ENST00000380409 NAIF1Q69YI7 327 aaPredicted RBP7.68□□□□□ -1.18
RIPK1-202ENST00000380409 PRPF38AQ8NAV1 312 aaKnown RBP7.68□□□□□ -1.18
RIPK1-202ENST00000380409 UTP14AQ9BVJ6 771 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms