RNA–Protein interactions for RNA: ENST00000380151.3

CDKN2A-203, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best)

Gene CDKN2A, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-203ENST00000380151 ANKRD36CQ5JPF3 1778 aa30.95■■■□□ 2.55
CDKN2A-203ENST00000380151 ALDH1B1P30837 517 aa30.94■■■□□ 2.54
CDKN2A-203ENST00000380151 GNAI1P63096 354 aa30.94■■■□□ 2.54
CDKN2A-203ENST00000380151 RPGRQ92834 1020 aaKnown RBP30.94■■■□□ 2.54
CDKN2A-203ENST00000380151 CEP350Q5VT06 3117 aa30.94■■■□□ 2.54
CDKN2A-203ENST00000380151 DICER1Q9UPY3 1922 aaKnown RBP30.94■■■□□ 2.54
CDKN2A-203ENST00000380151 HSP90AB3PQ58FF7 597 aa30.93■■■□□ 2.54
CDKN2A-203ENST00000380151 C3orf67Q6ZVT6 689 aa30.93■■■□□ 2.54
CDKN2A-203ENST00000380151 UTP14AQ9BVJ6 771 aaKnown RBP30.93■■■□□ 2.54
CDKN2A-203ENST00000380151 ANP32CO43423 234 aa30.92■■■□□ 2.54
CDKN2A-203ENST00000380151 RBM46Q8TBY0 533 aaKnown RBP30.92■■■□□ 2.54
CDKN2A-203ENST00000380151 DBF4Q9UBU7 674 aaPredicted RBP30.92■■■□□ 2.54
CDKN2A-203ENST00000380151 MRS2Q9HD23 443 aa30.91■■■□□ 2.54
CDKN2A-203ENST00000380151 FKBP4Q02790 459 aaKnown RBP eCLIP30.9■■■□□ 2.54
CDKN2A-203ENST00000380151 NLRP10Q86W26 655 aa30.9■■■□□ 2.54
CDKN2A-203ENST00000380151 HOXA10P31260 410 aaPredicted RBP30.89■■■□□ 2.54
CDKN2A-203ENST00000380151 TCIRG1Q13488 830 aa30.89■■■□□ 2.54
CDKN2A-203ENST00000380151 ELL2O00472 640 aaPredicted RBP30.88■■■□□ 2.53
CDKN2A-203ENST00000380151 RTKN2Q8IZC4 609 aa30.88■■■□□ 2.53
CDKN2A-203ENST00000380151 ZNF277Q9NRM2 450 aaPredicted RBP30.88■■■□□ 2.53
CDKN2A-203ENST00000380151 DPY19L2Q6NUT2 758 aa30.87■■■□□ 2.53
CDKN2A-203ENST00000380151 PLBD2Q8NHP8 589 aa30.87■■■□□ 2.53
CDKN2A-203ENST00000380151 RBM17Q96I25 401 aaKnown RBP30.87■■■□□ 2.53
CDKN2A-203ENST00000380151 RNF123Q5XPI4 1314 aa30.87■■■□□ 2.53
CDKN2A-203ENST00000380151 VEGFAP15692 232 aaPredicted RBP30.86■■■□□ 2.53
CDKN2A-203ENST00000380151 ZNF428Q96B54 188 aa30.86■■■□□ 2.53
CDKN2A-203ENST00000380151 NLRP3Q96P20 1036 aa30.86■■■□□ 2.53
CDKN2A-203ENST00000380151 HYPKQ9NX55 129 aa30.86■■■□□ 2.53
CDKN2A-203ENST00000380151 SNED1Q8TER0 1413 aa30.86■■■□□ 2.53
CDKN2A-203ENST00000380151 WDR90Q96KV7 1748 aa30.85■■■□□ 2.53
CDKN2A-203ENST00000380151 SLC51AQ86UW1 340 aa30.85■■■□□ 2.53
CDKN2A-203ENST00000380151 SLC10A5Q5PT55 438 aa30.84■■■□□ 2.53
CDKN2A-203ENST00000380151 ANKRD13DQ6ZTN6 518 aa30.84■■■□□ 2.53
CDKN2A-203ENST00000380151 SYNE4Q8N205 404 aa30.84■■■□□ 2.53
CDKN2A-203ENST00000380151 C8orf58Q8NAV2 365 aa30.84■■■□□ 2.53
CDKN2A-203ENST00000380151 CRAMP1Q96RY5 1269 aa30.84■■■□□ 2.53
CDKN2A-203ENST00000380151 TRMT112Q9UI30 125 aaKnown RBP30.84■■■□□ 2.53
CDKN2A-203ENST00000380151 PPEF1O14829 653 aaPredicted RBP30.83■■■□□ 2.53
CDKN2A-203ENST00000380151 HCLS1P14317 486 aaPredicted RBP30.83■■■□□ 2.53
CDKN2A-203ENST00000380151 SH3TC1Q8TE82 1336 aa30.82■■■□□ 2.52
CDKN2A-203ENST00000380151 TCERG1O14776 1098 aaKnown RBP30.82■■■□□ 2.52
CDKN2A-203ENST00000380151 FSTL1Q12841 308 aa30.82■■■□□ 2.52
CDKN2A-203ENST00000380151 POTECB2RU33 542 aa30.81■■■□□ 2.52
CDKN2A-203ENST00000380151 DDNO94850 711 aaPredicted RBP30.81■■■□□ 2.52
CDKN2A-203ENST00000380151 TSR2Q969E8 191 aaKnown RBP30.81■■■□□ 2.52
CDKN2A-203ENST00000380151 LAMB2P55268 1798 aa30.8■■■□□ 2.52
CDKN2A-203ENST00000380151 ATP5J2-PTCD1G3V325 749 aa30.8■■■□□ 2.52
CDKN2A-203ENST00000380151 APLP1P51693 650 aa30.8■■■□□ 2.52
CDKN2A-203ENST00000380151 CCDC27Q2M243 656 aa30.8■■■□□ 2.52
CDKN2A-203ENST00000380151 CC2D2BQ6DHV5 1058 aa30.8■■■□□ 2.52
CDKN2A-203ENST00000380151 ABCC4O15439 1325 aa30.79■■■□□ 2.52
CDKN2A-203ENST00000380151 IARSP41252 1262 aaKnown RBP30.79■■■□□ 2.52
CDKN2A-203ENST00000380151 WWC1Q8IX03 1113 aa30.79■■■□□ 2.52
CDKN2A-203ENST00000380151 SMC1BQ8NDV3 1235 aa30.79■■■□□ 2.52
CDKN2A-203ENST00000380151 PSMD1Q99460 953 aa30.79■■■□□ 2.52
CDKN2A-203ENST00000380151 ISCA1Q9BUE6 129 aa30.79■■■□□ 2.52
CDKN2A-203ENST00000380151 PHAXQ9H814 394 aaKnown RBP30.79■■■□□ 2.52
CDKN2A-203ENST00000380151 ZNF541Q9H0D2 1346 aa30.78■■■□□ 2.52
CDKN2A-203ENST00000380151 GOLGA2Q08379 1002 aa30.78■■■□□ 2.52
CDKN2A-203ENST00000380151 TSPYL6Q8N831 410 aa30.78■■■□□ 2.52
CDKN2A-203ENST00000380151 RIC3Q7Z5B4 369 aa30.75■■■□□ 2.51
CDKN2A-203ENST00000380151 DDX60Q8IY21 1712 aaKnown RBP30.74■■■□□ 2.51
CDKN2A-203ENST00000380151 FAM89AQ96GI7 184 aa30.74■■■□□ 2.51
CDKN2A-203ENST00000380151 COL4A5P29400 1685 aa30.74■■■□□ 2.51
CDKN2A-203ENST00000380151 CCDC30Q5VVM6 783 aa30.73■■■□□ 2.51
CDKN2A-203ENST00000380151 ATP6V0A2Q9Y487 856 aa30.73■■■□□ 2.51
CDKN2A-203ENST00000380151 GRIPAP1Q4V328 841 aa30.72■■■□□ 2.51
CDKN2A-203ENST00000380151 SALL2Q9Y467 1007 aaPredicted RBP30.72■■■□□ 2.51
CDKN2A-203ENST00000380151 HTRA3P83110 453 aa30.71■■■□□ 2.51
CDKN2A-203ENST00000380151 RTL5Q5HYW3 569 aaPredicted RBP30.71■■■□□ 2.51
CDKN2A-203ENST00000380151 DDX46Q7L014 1031 aaKnown RBP30.71■■■□□ 2.51
CDKN2A-203ENST00000380151 IL16Q14005 1332 aa30.71■■■□□ 2.51
CDKN2A-203ENST00000380151 FZD9O00144 591 aa30.7■■■□□ 2.51
CDKN2A-203ENST00000380151 TRIM28Q13263 835 aaKnown RBP30.7■■■□□ 2.51
CDKN2A-203ENST00000380151 JDP2Q8WYK2 163 aa30.7■■■□□ 2.51
CDKN2A-203ENST00000380151 L3MBTL3Q96JM7 780 aaPredicted RBP30.7■■■□□ 2.51
CDKN2A-203ENST00000380151 TMX4Q9H1E5 349 aaPredicted RBP30.7■■■□□ 2.51
CDKN2A-203ENST00000380151 GRAPQ13588 217 aa30.69■■■□□ 2.5
CDKN2A-203ENST00000380151 NCBP3Q53F19 620 aaKnown RBP30.69■■■□□ 2.5
CDKN2A-203ENST00000380151 GRAPLQ8TC17 118 aaPredicted RBP30.69■■■□□ 2.5
CDKN2A-203ENST00000380151 MYD88Q99836 296 aa30.69■■■□□ 2.5
CDKN2A-203ENST00000380151 CHMP4AQ9BY43 222 aa30.69■■■□□ 2.5
CDKN2A-203ENST00000380151 LARGE2Q8N3Y3 721 aa30.68■■■□□ 2.5
CDKN2A-203ENST00000380151 IQCA1LA6NCM1 817 aa30.67■■■□□ 2.5
CDKN2A-203ENST00000380151 BBOX1O75936 387 aa30.67■■■□□ 2.5
CDKN2A-203ENST00000380151 POTEIP0CG38 1075 aa30.66■■■□□ 2.5
CDKN2A-203ENST00000380151 POTEJP0CG39 1038 aa30.66■■■□□ 2.5
CDKN2A-203ENST00000380151 TWISTNBQ3B726 338 aaPredicted RBP30.66■■■□□ 2.5
CDKN2A-203ENST00000380151 FANCIQ9NVI1 1328 aa30.66■■■□□ 2.5
CDKN2A-203ENST00000380151 TAF1P21675 1872 aa30.65■■■□□ 2.5
CDKN2A-203ENST00000380151 IRS4O14654 1257 aaPredicted RBP30.65■■■□□ 2.5
CDKN2A-203ENST00000380151 DDX58O95786 925 aaKnown RBP30.65■■■□□ 2.5
CDKN2A-203ENST00000380151 FAM9BQ8IZU0 186 aa30.65■■■□□ 2.5
CDKN2A-203ENST00000380151 STK31Q9BXU1 1019 aa30.65■■■□□ 2.5
CDKN2A-203ENST00000380151 SCN4AP35499 1836 aa30.65■■■□□ 2.5
CDKN2A-203ENST00000380151 PPIP5K2O43314 1243 aa30.64■■■□□ 2.5
CDKN2A-203ENST00000380151 SP8Q8IXZ3 490 aa30.64■■■□□ 2.5
CDKN2A-203ENST00000380151 TAF1DQ9H5J8 278 aaPredicted RBP30.64■■■□□ 2.5
CDKN2A-203ENST00000380151 EIF6P56537 245 aaKnown RBP30.63■■■□□ 2.49
CDKN2A-203ENST00000380151 SF3B3Q15393 1217 aaKnown RBP30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms