RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 GPATCH11Q8N954 259 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 DEF6Q9H4E7 631 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 MSH6P52701 1360 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 CPA1P15085 419 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 H2AFXP16104 143 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-202ENST00000380097 OAS2P29728 719 aaKnown RBP8.54□□□□□ -1.04
TRIM6-202ENST00000380097 GSDMDP57764 484 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 ICE2Q659A1 982 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 NECTIN2Q92692 538 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 SMARCE1Q969G3 411 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 FBXW7Q969H0 707 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 GEMIN8Q9NWZ8 242 aaKnown RBP8.54□□□□□ -1.04
TRIM6-202ENST00000380097 SNX14Q9Y5W7 946 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 SSH2Q76I76 1423 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 ELP1O95163 1332 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 NPHP3Q7Z494 1330 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 URI1O94763 535 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-202ENST00000380097 SLC4A2P04920 1241 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 TPM1P09493 284 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 CDC25BP30305 580 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 CCDC34Q96HJ3 373 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 JAKMIP1Q96N16 626 aaKnown RBP8.54□□□□□ -1.04
TRIM6-202ENST00000380097 CLSTN2Q9H4D0 955 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 SH2B1Q9NRF2 756 aaPredicted RBP8.54□□□□□ -1.04
TRIM6-202ENST00000380097 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRIM6-202ENST00000380097 CYP46A1Q9Y6A2 500 aa8.54□□□□□ -1.04
TRIM6-202ENST00000380097 LOC102724159A0A0B4J2E5 919 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 FAM83GA6ND36 823 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 ST5P78524 1137 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 PWP2Q15269 919 aaKnown RBP8.53□□□□□ -1.04
TRIM6-202ENST00000380097 MRFAP1L1Q96HT8 127 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 ZCCHC17Q9NP64 241 aaKnown RBP8.53□□□□□ -1.04
TRIM6-202ENST00000380097 MROH2AA6NES4 1674 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 PTPRCP08575 1304 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 A0A1B0GUL7 405 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 GYS2P54840 703 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 SMC1AQ14683 1233 aaKnown RBP8.53□□□□□ -1.04
TRIM6-202ENST00000380097 NECAB1Q8N987 351 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 IL1RAPL2Q9NP60 686 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 DNAI1Q9UI46 699 aa8.53□□□□□ -1.04
TRIM6-202ENST00000380097 YTHDC2Q9H6S0 1430 aaKnown RBP8.53□□□□□ -1.04
TRIM6-202ENST00000380097 ZKSCAN1P17029 563 aaPredicted RBP8.52□□□□□ -1.04
TRIM6-202ENST00000380097 SFPQP23246 707 aaKnown RBP eCLIP8.52□□□□□ -1.04
TRIM6-202ENST00000380097 TTC31Q49AM3 519 aaPredicted RBP8.52□□□□□ -1.04
TRIM6-202ENST00000380097 ESCO1Q5FWF5 840 aa8.52□□□□□ -1.04
TRIM6-202ENST00000380097 CWC27Q6UX04 472 aaKnown RBP8.52□□□□□ -1.04
TRIM6-202ENST00000380097 PROSER2Q86WR7 435 aaPredicted RBP8.52□□□□□ -1.04
TRIM6-202ENST00000380097 GOLGA5Q8TBA6 731 aa8.52□□□□□ -1.04
TRIM6-202ENST00000380097 MYCBPQ99417 103 aaPredicted RBP8.52□□□□□ -1.04
TRIM6-202ENST00000380097 POLKQ9UBT6 870 aa8.52□□□□□ -1.04
TRIM6-202ENST00000380097 RRP15Q9Y3B9 282 aaKnown RBP8.52□□□□□ -1.04
TRIM6-202ENST00000380097 TMEM2Q9UHN6 1383 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
TRIM6-202ENST00000380097 SEC31AO94979 1220 aaKnown RBP8.52□□□□□ -1.05
TRIM6-202ENST00000380097 SMC2O95347 1197 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 UNC5CLQ8IV45 518 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 HOMEZQ8IX15 550 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.05
TRIM6-202ENST00000380097 F6X3S4 739 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 EPB41L2O43491 1005 aaKnown RBP8.52□□□□□ -1.05
TRIM6-202ENST00000380097 NR1I2O75469 434 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 CCT4P50991 539 aaKnown RBP8.52□□□□□ -1.05
TRIM6-202ENST00000380097 DDX54Q8TDD1 881 aaKnown RBP8.52□□□□□ -1.05
TRIM6-202ENST00000380097 COG3Q96JB2 828 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 DRC1Q96MC2 740 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 NAT10Q9H0A0 1025 aaKnown RBP8.52□□□□□ -1.05
TRIM6-202ENST00000380097 MIS18AQ9NYP9 233 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 SPG7Q9UQ90 795 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 CAMSAP1Q5T5Y3 1602 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 ATP10DQ9P241 1426 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 A0A1W2PP64 1363 aa8.52□□□□□ -1.05
TRIM6-202ENST00000380097 ZNF853P0CG23 659 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 STX1AQ16623 288 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 AXDND1Q5T1B0 1012 aaPredicted RBP8.51□□□□□ -1.05
TRIM6-202ENST00000380097 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 RASEFQ8IZ41 740 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 CNTROBQ8N137 903 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 DDX17Q92841 729 aaKnown RBP8.51□□□□□ -1.05
TRIM6-202ENST00000380097 ZNF622Q969S3 477 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRIM6-202ENST00000380097 ARFGAP3Q9NP61 516 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 JRKLQ9Y4A0 524 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 KIF1BO60333 1816 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 A2ML1A8K2U0 1454 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 H3BQV1 296 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 CCP110O43303 1012 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 LARGE1O95461 756 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 TUBB4AP04350 444 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 IVLP07476 585 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 NOP2P46087 812 aaKnown RBP8.51□□□□□ -1.05
TRIM6-202ENST00000380097 CEBPZQ03701 1054 aaKnown RBP8.51□□□□□ -1.05
TRIM6-202ENST00000380097 IFFO2Q5TF58 517 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 CDC37L1Q7L3B6 337 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 CEP57L1Q8IYX8 460 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 BANK1Q8NDB2 785 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 FBXO18Q8NFZ0 1043 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 RUFY2Q8WXA3 655 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 LCMT1Q9UIC8 334 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 ATP8B1O43520 1251 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 FOXO3O43524 673 aa8.51□□□□□ -1.05
TRIM6-202ENST00000380097 CCDC73Q6ZRK6 1079 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms