RNA–Protein interactions for RNA: ENST00000379721.3

SPINK4-201, Transcript of serine peptidase inhibitor, Kazal type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPINK4, Length 402 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPINK4-201ENST00000379721 TSPYL6Q8N831 410 aa16.08■□□□□ 0.16
SPINK4-201ENST00000379721 UTP14AQ9BVJ6 771 aaKnown RBP16.08■□□□□ 0.16
SPINK4-201ENST00000379721 CHMP4AQ9BY43 222 aa16.08■□□□□ 0.16
SPINK4-201ENST00000379721 LMNB1P20700 586 aa16.07■□□□□ 0.16
SPINK4-201ENST00000379721 SOGA3Q5TF21 947 aa16.07■□□□□ 0.16
SPINK4-201ENST00000379721 NLRP10Q86W26 655 aa16.07■□□□□ 0.16
SPINK4-201ENST00000379721 WDR63Q8IWG1 891 aa16.07■□□□□ 0.16
SPINK4-201ENST00000379721 RNF123Q5XPI4 1314 aa16.07■□□□□ 0.16
SPINK4-201ENST00000379721 TIAM2Q8IVF5 1701 aa16.07■□□□□ 0.16
SPINK4-201ENST00000379721 DICER1Q9UPY3 1922 aaKnown RBP16.07■□□□□ 0.16
SPINK4-201ENST00000379721 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
SPINK4-201ENST00000379721 LAMB2P55268 1798 aa16.05■□□□□ 0.16
SPINK4-201ENST00000379721 FANCIQ9NVI1 1328 aa16.05■□□□□ 0.16
SPINK4-201ENST00000379721 ALDH1B1P30837 517 aa16.05■□□□□ 0.16
SPINK4-201ENST00000379721 PRELPP51888 382 aa16.05■□□□□ 0.16
SPINK4-201ENST00000379721 GOLGA2Q08379 1002 aa16.05■□□□□ 0.16
SPINK4-201ENST00000379721 C7orf43Q8WVR3 580 aa16.05■□□□□ 0.16
SPINK4-201ENST00000379721 RPGRQ92834 1020 aaKnown RBP16.05■□□□□ 0.16
SPINK4-201ENST00000379721 PHAXQ9H814 394 aaKnown RBP16.05■□□□□ 0.16
SPINK4-201ENST00000379721 LTBP3Q9NS15 1303 aa16.04■□□□□ 0.16
SPINK4-201ENST00000379721 ZC3H4Q9UPT8 1303 aaKnown RBP16.04■□□□□ 0.16
SPINK4-201ENST00000379721 C1QTNF8P60827 252 aa16.04■□□□□ 0.16
SPINK4-201ENST00000379721 TWISTNBQ3B726 338 aaPredicted RBP16.04■□□□□ 0.16
SPINK4-201ENST00000379721 CCDC93Q567U6 631 aa16.04■□□□□ 0.16
SPINK4-201ENST00000379721 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
SPINK4-201ENST00000379721 ISCA1Q9BUE6 129 aa16.04■□□□□ 0.16
SPINK4-201ENST00000379721 TAOK3Q9H2K8 898 aa16.04■□□□□ 0.16
SPINK4-201ENST00000379721 SH3TC1Q8TE82 1336 aa16.03■□□□□ 0.16
SPINK4-201ENST00000379721 HOXA10P31260 410 aaPredicted RBP16.03■□□□□ 0.16
SPINK4-201ENST00000379721 C3orf67Q6ZVT6 689 aa16.03■□□□□ 0.16
SPINK4-201ENST00000379721 RIC3Q7Z5B4 369 aa16.03■□□□□ 0.16
SPINK4-201ENST00000379721 NLRP3Q96P20 1036 aa16.03■□□□□ 0.16
SPINK4-201ENST00000379721 TRMT112Q9UI30 125 aaKnown RBP16.03■□□□□ 0.16
SPINK4-201ENST00000379721 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
SPINK4-201ENST00000379721 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.16
SPINK4-201ENST00000379721 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
SPINK4-201ENST00000379721 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.15
SPINK4-201ENST00000379721 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
SPINK4-201ENST00000379721 KIF3CO14782 793 aa16.01■□□□□ 0.15
SPINK4-201ENST00000379721 DDX58O95786 925 aaKnown RBP16.01■□□□□ 0.15
SPINK4-201ENST00000379721 HCLS1P14317 486 aaPredicted RBP16.01■□□□□ 0.15
SPINK4-201ENST00000379721 OLFM4Q6UX06 510 aa16.01■□□□□ 0.15
SPINK4-201ENST00000379721 SYNE4Q8N205 404 aa16.01■□□□□ 0.15
SPINK4-201ENST00000379721 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
SPINK4-201ENST00000379721 RBM17Q96I25 401 aaKnown RBP16.01■□□□□ 0.15
SPINK4-201ENST00000379721 CRAMP1Q96RY5 1269 aa16.01■□□□□ 0.15
SPINK4-201ENST00000379721 TCERG1O14776 1098 aaKnown RBP16■□□□□ 0.15
SPINK4-201ENST00000379721 TRIM28Q13263 835 aaKnown RBP16■□□□□ 0.15
SPINK4-201ENST00000379721 NMRK2Q9NPI5 230 aa16■□□□□ 0.15
SPINK4-201ENST00000379721 FKBP4Q02790 459 aaKnown RBP eCLIP15.99■□□□□ 0.15
SPINK4-201ENST00000379721 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
SPINK4-201ENST00000379721 RTKN2Q8IZC4 609 aa15.99■□□□□ 0.15
SPINK4-201ENST00000379721 MYD88Q99836 296 aa15.99■□□□□ 0.15
SPINK4-201ENST00000379721 MYH16Q9H6N6 1097 aa15.99■□□□□ 0.15
SPINK4-201ENST00000379721 SPINK5Q9NQ38 1064 aaPredicted RBP15.99■□□□□ 0.15
SPINK4-201ENST00000379721 SNED1Q8TER0 1413 aa15.99■□□□□ 0.15
SPINK4-201ENST00000379721 CCER2I3L3R5 266 aa15.98■□□□□ 0.15
SPINK4-201ENST00000379721 PPEF1O14829 653 aaPredicted RBP15.98■□□□□ 0.15
SPINK4-201ENST00000379721 CC2D2BQ6DHV5 1058 aa15.98■□□□□ 0.15
SPINK4-201ENST00000379721 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
SPINK4-201ENST00000379721 ABCC4O15439 1325 aa15.97■□□□□ 0.15
SPINK4-201ENST00000379721 ZNF521Q96K83 1311 aa15.97■□□□□ 0.15
SPINK4-201ENST00000379721 TAF1P21675 1872 aa15.97■□□□□ 0.15
SPINK4-201ENST00000379721 GLTPD2A6NH11 291 aa15.97■□□□□ 0.15
SPINK4-201ENST00000379721 VAMP4O75379 141 aa15.97■□□□□ 0.15
SPINK4-201ENST00000379721 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
SPINK4-201ENST00000379721 METTL22Q9BUU2 404 aaPredicted RBP15.97■□□□□ 0.15
SPINK4-201ENST00000379721 MAP3K2Q9Y2U5 619 aa15.97■□□□□ 0.15
SPINK4-201ENST00000379721 PI4KAP2A4QPH2 592 aa15.96■□□□□ 0.15
SPINK4-201ENST00000379721 RTL5Q5HYW3 569 aaPredicted RBP15.96■□□□□ 0.15
SPINK4-201ENST00000379721 KSR2Q6VAB6 950 aa15.96■□□□□ 0.15
SPINK4-201ENST00000379721 G2E3Q7L622 706 aa15.96■□□□□ 0.15
SPINK4-201ENST00000379721 PI4KAP1Q8N8J0 262 aa15.96■□□□□ 0.15
SPINK4-201ENST00000379721 CCDC191Q8NCU4 936 aa15.96■□□□□ 0.15
SPINK4-201ENST00000379721 ZNF277Q9NRM2 450 aaPredicted RBP15.96■□□□□ 0.15
SPINK4-201ENST00000379721 IRS4O14654 1257 aaPredicted RBP15.95■□□□□ 0.14
SPINK4-201ENST00000379721 GRIPAP1Q4V328 841 aa15.95■□□□□ 0.14
SPINK4-201ENST00000379721 DDX46Q7L014 1031 aaKnown RBP15.95■□□□□ 0.14
SPINK4-201ENST00000379721 ZBTB38Q8NAP3 1195 aaPredicted RBP15.95■□□□□ 0.14
SPINK4-201ENST00000379721 PSMD1Q99460 953 aa15.95■□□□□ 0.14
SPINK4-201ENST00000379721 CWC25Q9NXE8 425 aaPredicted RBP15.95■□□□□ 0.14
SPINK4-201ENST00000379721 IARSP41252 1262 aaKnown RBP15.94■□□□□ 0.14
SPINK4-201ENST00000379721 FLIIQ13045 1269 aa15.94■□□□□ 0.14
SPINK4-201ENST00000379721 GRAPQ13588 217 aa15.94■□□□□ 0.14
SPINK4-201ENST00000379721 SF3B3Q15393 1217 aaKnown RBP15.94■□□□□ 0.14
SPINK4-201ENST00000379721 DPY19L2Q6NUT2 758 aa15.94■□□□□ 0.14
SPINK4-201ENST00000379721 SLC51AQ86UW1 340 aa15.94■□□□□ 0.14
SPINK4-201ENST00000379721 GRAPLQ8TC17 118 aaPredicted RBP15.94■□□□□ 0.14
SPINK4-201ENST00000379721 TMX4Q9H1E5 349 aaPredicted RBP15.94■□□□□ 0.14
SPINK4-201ENST00000379721 RRAGCQ9HB90 399 aa15.94■□□□□ 0.14
SPINK4-201ENST00000379721 ATP6V0A2Q9Y487 856 aa15.94■□□□□ 0.14
SPINK4-201ENST00000379721 WDR90Q96KV7 1748 aa15.94■□□□□ 0.14
SPINK4-201ENST00000379721 BBOX1O75936 387 aa15.93■□□□□ 0.14
SPINK4-201ENST00000379721 TOMM70O94826 608 aa15.93■□□□□ 0.14
SPINK4-201ENST00000379721 PCCAP05165 728 aaPredicted RBP15.93■□□□□ 0.14
SPINK4-201ENST00000379721 NEXNQ0ZGT2 675 aa15.93■□□□□ 0.14
SPINK4-201ENST00000379721 C16orf71Q8IYS4 520 aaPredicted RBP15.93■□□□□ 0.14
SPINK4-201ENST00000379721 LRRC37AA6NMS7 1700 aa15.92■□□□□ 0.14
SPINK4-201ENST00000379721 IGKV5-2P06315 115 aa15.92■□□□□ 0.14
SPINK4-201ENST00000379721 HSP90B1P14625 803 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms