RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 ZNF330Q9Y3S2 320 aaPredicted RBP16.68■□□□□ 0.26
SNCAIP-203ENST00000379538 REC8O95072 547 aa16.68■□□□□ 0.26
SNCAIP-203ENST00000379538 CHMP4BQ9H444 224 aaKnown RBP16.68■□□□□ 0.26
SNCAIP-203ENST00000379538 PDIA6Q15084 440 aa16.67■□□□□ 0.26
SNCAIP-203ENST00000379538 PTF1AQ7RTS3 328 aa16.67■□□□□ 0.26
SNCAIP-203ENST00000379538 PIBF1Q8WXW3 757 aa16.67■□□□□ 0.26
SNCAIP-203ENST00000379538 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
SNCAIP-203ENST00000379538 BABAM1Q9NWV8 329 aa16.67■□□□□ 0.26
SNCAIP-203ENST00000379538 EXOC6BQ9Y2D4 811 aa16.67■□□□□ 0.26
SNCAIP-203ENST00000379538 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 LRP6O75581 1613 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 AP5Z1O43299 807 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 A1BGP04217 495 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 JCADQ9P266 1359 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 KCNQ2O43526 872 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 KCNQ4P56696 695 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 DDB1Q16531 1140 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 SPC24Q8NBT2 197 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 ANO2Q9NQ90 1003 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 CNPY2Q9Y2B0 182 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 PLCH1Q4KWH8 1693 aa16.66■□□□□ 0.26
SNCAIP-203ENST00000379538 TCHHQ07283 1943 aa16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 ATP10DQ9P241 1426 aa16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 PTPRCP08575 1304 aa16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 U2AF2P26368 475 aaKnown RBP eCLIP16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 CWF19L2Q2TBE0 894 aaKnown RBP16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 MARCH10Q8NA82 808 aaPredicted RBP16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 IL25Q9H293 177 aa16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 PYCARDQ9ULZ3 195 aa16.65■□□□□ 0.26
SNCAIP-203ENST00000379538 PKD1L3Q7Z443 1732 aa16.64■□□□□ 0.26
SNCAIP-203ENST00000379538 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 RILPL2Q969X0 211 aa16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 DBF4Q9UBU7 674 aaPredicted RBP16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 USP21Q9UK80 565 aa16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 KIF3AQ9Y496 699 aa16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 SPATA31A5Q5VU36 1347 aa16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 SPATA31A7Q8IWB4 1347 aa16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 PDE1AP54750 535 aa16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 NKX1-1Q15270 411 aaPredicted RBP16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 MAP3K2Q9Y2U5 619 aa16.64■□□□□ 0.25
SNCAIP-203ENST00000379538 COPS6Q7L5N1 327 aa16.63■□□□□ 0.25
SNCAIP-203ENST00000379538 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
SNCAIP-203ENST00000379538 BCL9LQ86UU0 1499 aa16.63■□□□□ 0.25
SNCAIP-203ENST00000379538 SNRPA1P09661 255 aaKnown RBP16.63■□□□□ 0.25
SNCAIP-203ENST00000379538 NBPF7P0C2Y1 421 aaPredicted RBP16.63■□□□□ 0.25
SNCAIP-203ENST00000379538 GIMAP6Q6P9H5 292 aa16.63■□□□□ 0.25
SNCAIP-203ENST00000379538 XAGE3Q8WTP9 111 aa16.63■□□□□ 0.25
SNCAIP-203ENST00000379538 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
SNCAIP-203ENST00000379538 DISP2A7MBM2 1401 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 SRCIN1Q9C0H9 1055 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 SRCAPQ6ZRS2 3230 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 TRIM6-TRIM34B2RNG4 842 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 NBPF26B4DH59 902 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 ERVV-2B6SEH9 535 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 RIOK3O14730 519 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 NBPF14Q5TI25 921 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 NBPF10Q6P3W6 841 aaKnown RBP16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 NBPF15Q8N660 670 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 SLC4A9Q96Q91 983 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 ATG3Q9NT62 314 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 SIPA1L3O60292 1781 aaPredicted RBP16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 ADCY9O60503 1353 aa16.62■□□□□ 0.25
SNCAIP-203ENST00000379538 KCNF1Q9H3M0 494 aa16.61■□□□□ 0.25
SNCAIP-203ENST00000379538 SLIT2O94813 1529 aa16.61■□□□□ 0.25
SNCAIP-203ENST00000379538 PARP4Q9UKK3 1724 aaKnown RBP16.61■□□□□ 0.25
SNCAIP-203ENST00000379538 CUL4AQ13619 759 aa16.61■□□□□ 0.25
SNCAIP-203ENST00000379538 PRIMPOLQ96LW4 560 aa16.61■□□□□ 0.25
SNCAIP-203ENST00000379538 USP44Q9H0E7 712 aa16.61■□□□□ 0.25
SNCAIP-203ENST00000379538 FIBPO43427 364 aa16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 MAP4K4O95819 1239 aaPredicted RBP16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 HMGN5P82970 282 aaKnown RBP16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 UTP14CQ5TAP6 766 aaKnown RBP16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 DNAJC10Q8IXB1 793 aa16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 ADAMTS7Q9UKP4 1686 aa16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 NAA30Q147X3 362 aaPredicted RBP16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 RPAP2Q8IXW5 612 aaPredicted RBP16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 DNAAF4Q8WXU2 420 aa16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 SYAP1Q96A49 352 aaPredicted RBP16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 C5P01031 1676 aa16.6■□□□□ 0.25
SNCAIP-203ENST00000379538 ATP5J2-PTCD1G3V325 749 aa16.59■□□□□ 0.25
SNCAIP-203ENST00000379538 PDCL2Q8N4E4 241 aa16.59■□□□□ 0.25
SNCAIP-203ENST00000379538 DDX21Q9NR30 783 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNCAIP-203ENST00000379538 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
SNCAIP-203ENST00000379538 LRRFIP2Q9Y608 721 aaKnown RBP16.59■□□□□ 0.25
SNCAIP-203ENST00000379538 TOGARAM1Q9Y4F4 1720 aa16.59■□□□□ 0.25
SNCAIP-203ENST00000379538 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
SNCAIP-203ENST00000379538 SMIM5Q71RC9 77 aa16.59■□□□□ 0.25
SNCAIP-203ENST00000379538 PNMA6EA0A0J9YXQ4 647 aa16.58■□□□□ 0.25
SNCAIP-203ENST00000379538 HOXB7P09629 217 aa16.58■□□□□ 0.25
SNCAIP-203ENST00000379538 CPA1P15085 419 aa16.58■□□□□ 0.25
SNCAIP-203ENST00000379538 GTF2F1P35269 517 aaKnown RBP eCLIP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms