RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 HTATSF1O43719 755 aaKnown RBP23.6■■□□□ 1.37
PDLIM4-202ENST00000379018 LMOD1P29536 600 aaPredicted RBP23.6■■□□□ 1.37
PDLIM4-202ENST00000379018 DEFB115Q30KQ5 88 aa23.6■■□□□ 1.37
PDLIM4-202ENST00000379018 TTLL7Q6ZT98 887 aa23.6■■□□□ 1.37
PDLIM4-202ENST00000379018 ZBTB3Q9H5J0 574 aa23.6■■□□□ 1.37
PDLIM4-202ENST00000379018 DLG5Q8TDM6 1919 aa23.59■■□□□ 1.37
PDLIM4-202ENST00000379018 RGL2O15211 777 aa23.59■■□□□ 1.37
PDLIM4-202ENST00000379018 NEFMP07197 916 aa23.59■■□□□ 1.37
PDLIM4-202ENST00000379018 GRM1Q13255 1194 aa23.59■■□□□ 1.37
PDLIM4-202ENST00000379018 PSMD1Q99460 953 aa23.59■■□□□ 1.37
PDLIM4-202ENST00000379018 COL4A5P29400 1685 aa23.59■■□□□ 1.37
PDLIM4-202ENST00000379018 MAP3K15Q6ZN16 1313 aa23.59■■□□□ 1.37
PDLIM4-202ENST00000379018 LARGE2Q8N3Y3 721 aa23.58■■□□□ 1.37
PDLIM4-202ENST00000379018 THUMPD2Q9BTF0 503 aaKnown RBP23.58■■□□□ 1.37
PDLIM4-202ENST00000379018 WBP1LQ9NX94 342 aa23.58■■□□□ 1.37
PDLIM4-202ENST00000379018 FMR1Q06787 632 aaKnown RBP eCLIP23.57■■□□□ 1.36
PDLIM4-202ENST00000379018 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
PDLIM4-202ENST00000379018 KDM3BQ7LBC6 1761 aa23.57■■□□□ 1.36
PDLIM4-202ENST00000379018 UBN2Q6ZU65 1347 aa23.57■■□□□ 1.36
PDLIM4-202ENST00000379018 LTBP1Q14766 1721 aa23.56■■□□□ 1.36
PDLIM4-202ENST00000379018 RASSF10A6NK89 507 aa23.56■■□□□ 1.36
PDLIM4-202ENST00000379018 SNED1Q8TER0 1413 aa23.56■■□□□ 1.36
PDLIM4-202ENST00000379018 WDR33Q9C0J8 1336 aaKnown RBP23.56■■□□□ 1.36
PDLIM4-202ENST00000379018 ERVV-1B6SEH8 477 aa23.55■■□□□ 1.36
PDLIM4-202ENST00000379018 PPEF1O14829 653 aaPredicted RBP23.55■■□□□ 1.36
PDLIM4-202ENST00000379018 EPS15P42566 896 aa23.55■■□□□ 1.36
PDLIM4-202ENST00000379018 SUSD4Q5VX71 490 aa23.55■■□□□ 1.36
PDLIM4-202ENST00000379018 DDX21Q9NR30 783 aaKnown RBP eCLIP23.55■■□□□ 1.36
PDLIM4-202ENST00000379018 CC2D2BQ6DHV5 1058 aa23.54■■□□□ 1.36
PDLIM4-202ENST00000379018 PNISRQ8TF01 805 aaKnown RBP23.54■■□□□ 1.36
PDLIM4-202ENST00000379018 RBM17Q96I25 401 aaKnown RBP23.54■■□□□ 1.36
PDLIM4-202ENST00000379018 HSPA8P11142 646 aaKnown RBP23.53■■□□□ 1.36
PDLIM4-202ENST00000379018 EIF4A1P60842 406 aaKnown RBP23.53■■□□□ 1.36
PDLIM4-202ENST00000379018 C3orf67Q6ZVT6 689 aa23.53■■□□□ 1.36
PDLIM4-202ENST00000379018 NIM1KQ8IY84 436 aa23.53■■□□□ 1.36
PDLIM4-202ENST00000379018 SCNN1DP51172 638 aa23.52■■□□□ 1.36
PDLIM4-202ENST00000379018 TRAF5O00463 557 aa23.51■■□□□ 1.35
PDLIM4-202ENST00000379018 PPIP5K2O43314 1243 aa23.51■■□□□ 1.35
PDLIM4-202ENST00000379018 NTSR2O95665 410 aa23.5■■□□□ 1.35
PDLIM4-202ENST00000379018 HOXA10P31260 410 aaPredicted RBP23.5■■□□□ 1.35
PDLIM4-202ENST00000379018 MAP2K1Q02750 393 aaPredicted RBP23.5■■□□□ 1.35
PDLIM4-202ENST00000379018 AOC3Q16853 763 aa23.5■■□□□ 1.35
PDLIM4-202ENST00000379018 IBTKQ9P2D0 1353 aaPredicted RBP23.5■■□□□ 1.35
PDLIM4-202ENST00000379018 RIC1Q4ADV7 1423 aa23.5■■□□□ 1.35
PDLIM4-202ENST00000379018 CYP4F22Q6NT55 531 aa23.49■■□□□ 1.35
PDLIM4-202ENST00000379018 CAPNS2Q96L46 248 aa23.49■■□□□ 1.35
PDLIM4-202ENST00000379018 CRAMP1Q96RY5 1269 aa23.49■■□□□ 1.35
PDLIM4-202ENST00000379018 TMX4Q9H1E5 349 aaPredicted RBP23.49■■□□□ 1.35
PDLIM4-202ENST00000379018 EIF2S2P20042 333 aaKnown RBP23.48■■□□□ 1.35
PDLIM4-202ENST00000379018 NFE2L2Q16236 605 aa23.48■■□□□ 1.35
PDLIM4-202ENST00000379018 PPP1R42Q7Z4L9 355 aa23.48■■□□□ 1.35
PDLIM4-202ENST00000379018 ZNF34Q8IZ26 560 aa23.48■■□□□ 1.35
PDLIM4-202ENST00000379018 TRPM7Q96QT4 1865 aa23.47■■□□□ 1.35
PDLIM4-202ENST00000379018 ABHD8Q96I13 439 aa23.47■■□□□ 1.35
PDLIM4-202ENST00000379018 BEGAINQ9BUH8 593 aa23.47■■□□□ 1.35
PDLIM4-202ENST00000379018 MAPK8IP3Q9UPT6 1336 aa23.47■■□□□ 1.35
PDLIM4-202ENST00000379018 ANXA1P04083 346 aa23.46■■□□□ 1.35
PDLIM4-202ENST00000379018 GRIPAP1Q4V328 841 aa23.46■■□□□ 1.35
PDLIM4-202ENST00000379018 GIGYF2Q6Y7W6 1299 aaKnown RBP23.46■■□□□ 1.35
PDLIM4-202ENST00000379018 USP50Q70EL3 339 aaPredicted RBP23.46■■□□□ 1.35
PDLIM4-202ENST00000379018 NLRP3Q96P20 1036 aa23.46■■□□□ 1.35
PDLIM4-202ENST00000379018 TSKSQ9UJT2 592 aa23.46■■□□□ 1.35
PDLIM4-202ENST00000379018 ECE1P42892 770 aa23.45■■□□□ 1.34
PDLIM4-202ENST00000379018 GPR101Q96P66 508 aaPredicted RBP23.45■■□□□ 1.34
PDLIM4-202ENST00000379018 PLEKHF1Q96S99 279 aa23.45■■□□□ 1.34
PDLIM4-202ENST00000379018 TSPYL4Q9UJ04 414 aa23.45■■□□□ 1.34
PDLIM4-202ENST00000379018 ABCC4O15439 1325 aa23.44■■□□□ 1.34
PDLIM4-202ENST00000379018 NECTIN2Q92692 538 aa23.44■■□□□ 1.34
PDLIM4-202ENST00000379018 ZNF428Q96B54 188 aa23.44■■□□□ 1.34
PDLIM4-202ENST00000379018 UTP14AQ9BVJ6 771 aaKnown RBP23.44■■□□□ 1.34
PDLIM4-202ENST00000379018 AOC2O75106 756 aa23.43■■□□□ 1.34
PDLIM4-202ENST00000379018 PROSER3Q2NL68 480 aa23.43■■□□□ 1.34
PDLIM4-202ENST00000379018 PARP10Q53GL7 1025 aa23.43■■□□□ 1.34
PDLIM4-202ENST00000379018 CST9Q5W186 159 aa23.43■■□□□ 1.34
PDLIM4-202ENST00000379018 ATP6V0A2Q9Y487 856 aa23.43■■□□□ 1.34
PDLIM4-202ENST00000379018 ZNF408Q9H9D4 720 aa23.42■■□□□ 1.34
PDLIM4-202ENST00000379018 ADARB2Q9NS39 739 aaKnown RBP23.42■■□□□ 1.34
PDLIM4-202ENST00000379018 GPRC5DQ9NZD1 345 aa23.42■■□□□ 1.34
PDLIM4-202ENST00000379018 THSD7BQ9C0I4 1608 aa23.41■■□□□ 1.34
PDLIM4-202ENST00000379018 CELF2O95319 508 aaKnown RBP23.41■■□□□ 1.34
PDLIM4-202ENST00000379018 GMPSP49915 693 aaPredicted RBP23.41■■□□□ 1.34
PDLIM4-202ENST00000379018 CXCL9Q07325 125 aa23.41■■□□□ 1.34
PDLIM4-202ENST00000379018 AIMP1Q12904 312 aaKnown RBP23.41■■□□□ 1.34
PDLIM4-202ENST00000379018 FAM161AQ3B820 660 aa23.41■■□□□ 1.34
PDLIM4-202ENST00000379018 DPP8Q6V1X1 898 aaPredicted RBP23.41■■□□□ 1.34
PDLIM4-202ENST00000379018 TLL2Q9Y6L7 1015 aa23.41■■□□□ 1.34
PDLIM4-202ENST00000379018 ERBB4Q15303 1308 aa23.4■■□□□ 1.34
PDLIM4-202ENST00000379018 CCDC85CA6NKD9 419 aa23.4■■□□□ 1.34
PDLIM4-202ENST00000379018 HCLS1P14317 486 aaPredicted RBP23.4■■□□□ 1.34
PDLIM4-202ENST00000379018 BCL2L13Q9BXK5 485 aa23.4■■□□□ 1.34
PDLIM4-202ENST00000379018 GLIS2Q9BZE0 524 aaPredicted RBP23.4■■□□□ 1.34
PDLIM4-202ENST00000379018 ZNRF3Q9ULT6 936 aa23.4■■□□□ 1.34
PDLIM4-202ENST00000379018 LAMB2P55268 1798 aa23.4■■□□□ 1.34
PDLIM4-202ENST00000379018 RAD17O75943 681 aa23.39■■□□□ 1.33
PDLIM4-202ENST00000379018 SUPT20HQ8NEM7 779 aa23.39■■□□□ 1.33
PDLIM4-202ENST00000379018 MPNDQ8N594 471 aa23.38■■□□□ 1.33
PDLIM4-202ENST00000379018 PDIA6Q15084 440 aa23.37■■□□□ 1.33
PDLIM4-202ENST00000379018 CIAPIN1Q6FI81 312 aa23.37■■□□□ 1.33
PDLIM4-202ENST00000379018 PNNQ9H307 717 aaKnown RBP23.37■■□□□ 1.33
PDLIM4-202ENST00000379018 ANKRD36CQ5JPF3 1778 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms