RNA–Protein interactions for RNA: ENST00000378953.8

C5orf56-203, Transcript of chromosome 5 open reading frame 56, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C5orf56, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C5orf56-203ENST00000378953 TCERG1O14776 1098 aaKnown RBP25.37■■□□□ 1.65
C5orf56-203ENST00000378953 VAMP4O75379 141 aa25.37■■□□□ 1.65
C5orf56-203ENST00000378953 ISCA1Q9BUE6 129 aa25.37■■□□□ 1.65
C5orf56-203ENST00000378953 RIC1Q4ADV7 1423 aa25.37■■□□□ 1.65
C5orf56-203ENST00000378953 CRY2Q49AN0 593 aa25.36■■□□□ 1.65
C5orf56-203ENST00000378953 SLC10A5Q5PT55 438 aa25.36■■□□□ 1.65
C5orf56-203ENST00000378953 DDX58O95786 925 aaKnown RBP25.35■■□□□ 1.65
C5orf56-203ENST00000378953 PRPF40BQ6NWY9 871 aaKnown RBP25.35■■□□□ 1.65
C5orf56-203ENST00000378953 TRMT112Q9UI30 125 aaKnown RBP25.35■■□□□ 1.65
C5orf56-203ENST00000378953 ADCY9O60503 1353 aa25.34■■□□□ 1.65
C5orf56-203ENST00000378953 ATP5J2-PTCD1G3V325 749 aa25.34■■□□□ 1.65
C5orf56-203ENST00000378953 C21orf2O43822 256 aa25.34■■□□□ 1.65
C5orf56-203ENST00000378953 SLC4A2P04920 1241 aa25.34■■□□□ 1.65
C5orf56-203ENST00000378953 TRIM28Q13263 835 aaKnown RBP25.34■■□□□ 1.65
C5orf56-203ENST00000378953 ZNF219Q9P2Y4 722 aaPredicted RBP25.34■■□□□ 1.65
C5orf56-203ENST00000378953 ALDH1B1P30837 517 aa25.32■■□□□ 1.64
C5orf56-203ENST00000378953 NLRP3Q96P20 1036 aa25.32■■□□□ 1.64
C5orf56-203ENST00000378953 SH3TC1Q8TE82 1336 aa25.32■■□□□ 1.64
C5orf56-203ENST00000378953 ANKRD36CQ5JPF3 1778 aa25.31■■□□□ 1.64
C5orf56-203ENST00000378953 HOXA10P31260 410 aaPredicted RBP25.31■■□□□ 1.64
C5orf56-203ENST00000378953 C9orf131Q5VYM1 1079 aa25.31■■□□□ 1.64
C5orf56-203ENST00000378953 C3orf67Q6ZVT6 689 aa25.31■■□□□ 1.64
C5orf56-203ENST00000378953 SYNE4Q8N205 404 aa25.31■■□□□ 1.64
C5orf56-203ENST00000378953 RPGRQ92834 1020 aaKnown RBP25.31■■□□□ 1.64
C5orf56-203ENST00000378953 TNRC6CQ9HCJ0 1690 aaKnown RBP25.3■■□□□ 1.64
C5orf56-203ENST00000378953 E9PSI1 815 aa25.3■■□□□ 1.64
C5orf56-203ENST00000378953 SOGA3Q5TF21 947 aa25.3■■□□□ 1.64
C5orf56-203ENST00000378953 KSR2Q6VAB6 950 aa25.3■■□□□ 1.64
C5orf56-203ENST00000378953 G2E3Q7L622 706 aa25.3■■□□□ 1.64
C5orf56-203ENST00000378953 C7orf43Q8WVR3 580 aa25.3■■□□□ 1.64
C5orf56-203ENST00000378953 ZNF428Q96B54 188 aa25.3■■□□□ 1.64
C5orf56-203ENST00000378953 MYD88Q99836 296 aa25.3■■□□□ 1.64
C5orf56-203ENST00000378953 METTL22Q9BUU2 404 aaPredicted RBP25.3■■□□□ 1.64
C5orf56-203ENST00000378953 PI4KAP2A4QPH2 592 aa25.29■■□□□ 1.64
C5orf56-203ENST00000378953 NFKBIEO00221 500 aa25.29■■□□□ 1.64
C5orf56-203ENST00000378953 HCLS1P14317 486 aaPredicted RBP25.29■■□□□ 1.64
C5orf56-203ENST00000378953 RASSF7Q02833 373 aa25.29■■□□□ 1.64
C5orf56-203ENST00000378953 PI4KAP1Q8N8J0 262 aa25.29■■□□□ 1.64
C5orf56-203ENST00000378953 MAP3K2Q9Y2U5 619 aa25.29■■□□□ 1.64
C5orf56-203ENST00000378953 RBM17Q96I25 401 aaKnown RBP25.28■■□□□ 1.64
C5orf56-203ENST00000378953 RNF181Q9P0P0 153 aa25.28■■□□□ 1.64
C5orf56-203ENST00000378953 FLIIQ13045 1269 aa25.27■■□□□ 1.64
C5orf56-203ENST00000378953 CCDC191Q8NCU4 936 aa25.27■■□□□ 1.64
C5orf56-203ENST00000378953 FAM89AQ96GI7 184 aa25.27■■□□□ 1.64
C5orf56-203ENST00000378953 CRAMP1Q96RY5 1269 aa25.27■■□□□ 1.64
C5orf56-203ENST00000378953 SLX4Q8IY92 1834 aa25.27■■□□□ 1.64
C5orf56-203ENST00000378953 ARFGEF2Q9Y6D5 1785 aa25.26■■□□□ 1.63
C5orf56-203ENST00000378953 LMNB1P20700 586 aa25.26■■□□□ 1.63
C5orf56-203ENST00000378953 SLFN5Q08AF3 891 aa25.26■■□□□ 1.63
C5orf56-203ENST00000378953 PRELPP51888 382 aa25.25■■□□□ 1.63
C5orf56-203ENST00000378953 CCDC93Q567U6 631 aa25.25■■□□□ 1.63
C5orf56-203ENST00000378953 LTBP3Q9NS15 1303 aa25.24■■□□□ 1.63
C5orf56-203ENST00000378953 ZBTB38Q8NAP3 1195 aaPredicted RBP25.24■■□□□ 1.63
C5orf56-203ENST00000378953 CWC25Q9NXE8 425 aaPredicted RBP25.24■■□□□ 1.63
C5orf56-203ENST00000378953 FKBP5Q13451 457 aaPredicted RBP25.23■■□□□ 1.63
C5orf56-203ENST00000378953 CDCA7LQ96GN5 454 aa25.23■■□□□ 1.63
C5orf56-203ENST00000378953 TAOK3Q9H2K8 898 aa25.23■■□□□ 1.63
C5orf56-203ENST00000378953 NEXNQ0ZGT2 675 aa25.22■■□□□ 1.63
C5orf56-203ENST00000378953 RTL5Q5HYW3 569 aaPredicted RBP25.22■■□□□ 1.63
C5orf56-203ENST00000378953 OLFM4Q6UX06 510 aa25.22■■□□□ 1.63
C5orf56-203ENST00000378953 ZNF526Q8TF50 670 aaPredicted RBP25.22■■□□□ 1.63
C5orf56-203ENST00000378953 GPBP1L1Q9HC44 474 aaPredicted RBP25.22■■□□□ 1.63
C5orf56-203ENST00000378953 IRS4O14654 1257 aaPredicted RBP25.21■■□□□ 1.63
C5orf56-203ENST00000378953 IGKV5-2P06315 115 aa25.21■■□□□ 1.63
C5orf56-203ENST00000378953 RTKN2Q8IZC4 609 aa25.21■■□□□ 1.63
C5orf56-203ENST00000378953 PCCAP05165 728 aaPredicted RBP25.2■■□□□ 1.62
C5orf56-203ENST00000378953 CC2D2BQ6DHV5 1058 aa25.2■■□□□ 1.62
C5orf56-203ENST00000378953 TRMT2AQ8IZ69 625 aaKnown RBP25.2■■□□□ 1.62
C5orf56-203ENST00000378953 ZC3H4Q9UPT8 1303 aaKnown RBP25.19■■□□□ 1.62
C5orf56-203ENST00000378953 PPEF1O14829 653 aaPredicted RBP25.19■■□□□ 1.62
C5orf56-203ENST00000378953 HSP90B1P14625 803 aaKnown RBP25.19■■□□□ 1.62
C5orf56-203ENST00000378953 SF3B3Q15393 1217 aaKnown RBP25.19■■□□□ 1.62
C5orf56-203ENST00000378953 DDX46Q7L014 1031 aaKnown RBP25.19■■□□□ 1.62
C5orf56-203ENST00000378953 DNAAF4Q8WXU2 420 aa25.19■■□□□ 1.62
C5orf56-203ENST00000378953 ABCC4O15439 1325 aa25.18■■□□□ 1.62
C5orf56-203ENST00000378953 CACNA1SQ13698 1873 aa25.18■■□□□ 1.62
C5orf56-203ENST00000378953 NEURL1BA8MQ27 555 aa25.18■■□□□ 1.62
C5orf56-203ENST00000378953 BBOX1O75936 387 aa25.18■■□□□ 1.62
C5orf56-203ENST00000378953 SBF1O95248 1867 aa25.17■■□□□ 1.62
C5orf56-203ENST00000378953 FER1L6Q2WGJ9 1857 aa25.17■■□□□ 1.62
C5orf56-203ENST00000378953 FKBP4Q02790 459 aaKnown RBP eCLIP25.17■■□□□ 1.62
C5orf56-203ENST00000378953 CWF19L2Q2TBE0 894 aaKnown RBP25.17■■□□□ 1.62
C5orf56-203ENST00000378953 GRIPAP1Q4V328 841 aa25.16■■□□□ 1.62
C5orf56-203ENST00000378953 JARID2Q92833 1246 aaPredicted RBP25.16■■□□□ 1.62
C5orf56-203ENST00000378953 ATP6V0A2Q9Y487 856 aa25.16■■□□□ 1.62
C5orf56-203ENST00000378953 GRAPQ13588 217 aa25.15■■□□□ 1.62
C5orf56-203ENST00000378953 GRAPLQ8TC17 118 aaPredicted RBP25.15■■□□□ 1.62
C5orf56-203ENST00000378953 CACNA1FO60840 1977 aa25.14■■□□□ 1.62
C5orf56-203ENST00000378953 CDHR2Q9BYE9 1310 aa25.14■■□□□ 1.62
C5orf56-203ENST00000378953 SNED1Q8TER0 1413 aa25.14■■□□□ 1.62
C5orf56-203ENST00000378953 LINS1Q8NG48 757 aa25.14■■□□□ 1.62
C5orf56-203ENST00000378953 PSMD1Q99460 953 aa25.14■■□□□ 1.62
C5orf56-203ENST00000378953 TMX4Q9H1E5 349 aaPredicted RBP25.14■■□□□ 1.62
C5orf56-203ENST00000378953 DDX60Q8IY21 1712 aaKnown RBP25.13■■□□□ 1.61
C5orf56-203ENST00000378953 F6X3S4 739 aa25.13■■□□□ 1.61
C5orf56-203ENST00000378953 PDE8AO60658 829 aa25.13■■□□□ 1.61
C5orf56-203ENST00000378953 GCKRQ14397 625 aa25.13■■□□□ 1.61
C5orf56-203ENST00000378953 SLC51AQ86UW1 340 aa25.12■■□□□ 1.61
C5orf56-203ENST00000378953 SP8Q8IXZ3 490 aa25.12■■□□□ 1.61
C5orf56-203ENST00000378953 MRPL50Q8N5N7 158 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms