RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 SLC10A5Q5PT55 438 aa24.67■■□□□ 1.54
TMEM88B-201ENST00000378821 PPP1R42Q7Z4L9 355 aa24.67■■□□□ 1.54
TMEM88B-201ENST00000378821 RTKN2Q8IZC4 609 aa24.67■■□□□ 1.54
TMEM88B-201ENST00000378821 MRS2Q9HD23 443 aa24.67■■□□□ 1.54
TMEM88B-201ENST00000378821 FKBP4Q02790 459 aaKnown RBP eCLIP24.66■■□□□ 1.54
TMEM88B-201ENST00000378821 COPS6Q7L5N1 327 aa24.66■■□□□ 1.54
TMEM88B-201ENST00000378821 DNAJC5GQ8N7S2 189 aa24.66■■□□□ 1.54
TMEM88B-201ENST00000378821 RNF123Q5XPI4 1314 aa24.64■■□□□ 1.54
TMEM88B-201ENST00000378821 OLFM4Q6UX06 510 aa24.64■■□□□ 1.54
TMEM88B-201ENST00000378821 SMC1BQ8NDV3 1235 aa24.64■■□□□ 1.54
TMEM88B-201ENST00000378821 XAGE3Q8WTP9 111 aa24.64■■□□□ 1.54
TMEM88B-201ENST00000378821 CRAMP1Q96RY5 1269 aa24.64■■□□□ 1.54
TMEM88B-201ENST00000378821 LAS1LQ9Y4W2 734 aaKnown RBP24.64■■□□□ 1.54
TMEM88B-201ENST00000378821 APAF1O14727 1248 aa24.63■■□□□ 1.53
TMEM88B-201ENST00000378821 HSP90AB3PQ58FF7 597 aa24.63■■□□□ 1.53
TMEM88B-201ENST00000378821 CC2D2BQ6DHV5 1058 aa24.63■■□□□ 1.53
TMEM88B-201ENST00000378821 TCIRG1Q13488 830 aa24.62■■□□□ 1.53
TMEM88B-201ENST00000378821 NECTIN2Q92692 538 aa24.62■■□□□ 1.53
TMEM88B-201ENST00000378821 UTP14AQ9BVJ6 771 aaKnown RBP24.62■■□□□ 1.53
TMEM88B-201ENST00000378821 MBIPQ9NS73 344 aa24.62■■□□□ 1.53
TMEM88B-201ENST00000378821 CHPF2Q9P2E5 772 aa24.62■■□□□ 1.53
TMEM88B-201ENST00000378821 GRIPAP1Q4V328 841 aa24.61■■□□□ 1.53
TMEM88B-201ENST00000378821 RPGRQ92834 1020 aaKnown RBP24.61■■□□□ 1.53
TMEM88B-201ENST00000378821 PSMD1Q99460 953 aa24.61■■□□□ 1.53
TMEM88B-201ENST00000378821 HDGFL1Q5TGJ6 251 aa24.6■■□□□ 1.53
TMEM88B-201ENST00000378821 C3orf67Q6ZVT6 689 aa24.6■■□□□ 1.53
TMEM88B-201ENST00000378821 NLRP10Q86W26 655 aa24.6■■□□□ 1.53
TMEM88B-201ENST00000378821 IFT57Q9NWB7 429 aa24.6■■□□□ 1.53
TMEM88B-201ENST00000378821 DBF4Q9UBU7 674 aaPredicted RBP24.6■■□□□ 1.53
TMEM88B-201ENST00000378821 CALD1Q05682 793 aaKnown RBP24.59■■□□□ 1.53
TMEM88B-201ENST00000378821 AIMP1Q12904 312 aaKnown RBP24.59■■□□□ 1.53
TMEM88B-201ENST00000378821 DUSP27Q5VZP5 1158 aa24.59■■□□□ 1.53
TMEM88B-201ENST00000378821 RBM17Q96I25 401 aaKnown RBP24.59■■□□□ 1.53
TMEM88B-201ENST00000378821 L3MBTL3Q96JM7 780 aaPredicted RBP24.59■■□□□ 1.53
TMEM88B-201ENST00000378821 NLRP3Q96P20 1036 aa24.59■■□□□ 1.53
TMEM88B-201ENST00000378821 ZNF277Q9NRM2 450 aaPredicted RBP24.59■■□□□ 1.53
TMEM88B-201ENST00000378821 LAMB2P55268 1798 aa24.59■■□□□ 1.53
TMEM88B-201ENST00000378821 DDNO94850 711 aaPredicted RBP24.58■■□□□ 1.53
TMEM88B-201ENST00000378821 SYNE4Q8N205 404 aa24.58■■□□□ 1.53
TMEM88B-201ENST00000378821 PLBD2Q8NHP8 589 aa24.58■■□□□ 1.53
TMEM88B-201ENST00000378821 SCN4AP35499 1836 aa24.58■■□□□ 1.53
TMEM88B-201ENST00000378821 GNAI1P63096 354 aa24.57■■□□□ 1.52
TMEM88B-201ENST00000378821 HYPKQ9NX55 129 aa24.57■■□□□ 1.52
TMEM88B-201ENST00000378821 FZD9O00144 591 aa24.56■■□□□ 1.52
TMEM88B-201ENST00000378821 IARSP41252 1262 aaKnown RBP24.56■■□□□ 1.52
TMEM88B-201ENST00000378821 ANKRD13DQ6ZTN6 518 aa24.56■■□□□ 1.52
TMEM88B-201ENST00000378821 ISCA1Q9BUE6 129 aa24.55■■□□□ 1.52
TMEM88B-201ENST00000378821 PPEF1O14829 653 aaPredicted RBP24.53■■□□□ 1.52
TMEM88B-201ENST00000378821 TRIM28Q13263 835 aaKnown RBP24.53■■□□□ 1.52
TMEM88B-201ENST00000378821 SH3TC1Q8TE82 1336 aa24.53■■□□□ 1.52
TMEM88B-201ENST00000378821 CCDC27Q2M243 656 aa24.52■■□□□ 1.52
TMEM88B-201ENST00000378821 NCBP3Q53F19 620 aaKnown RBP24.52■■□□□ 1.52
TMEM88B-201ENST00000378821 TRMT112Q9UI30 125 aaKnown RBP24.52■■□□□ 1.52
TMEM88B-201ENST00000378821 ATP6V0A2Q9Y487 856 aa24.52■■□□□ 1.52
TMEM88B-201ENST00000378821 ZNF541Q9H0D2 1346 aa24.52■■□□□ 1.52
TMEM88B-201ENST00000378821 COL4A5P29400 1685 aa24.52■■□□□ 1.52
TMEM88B-201ENST00000378821 IQCA1LA6NCM1 817 aa24.51■■□□□ 1.51
TMEM88B-201ENST00000378821 DDX60Q8IY21 1712 aaKnown RBP24.51■■□□□ 1.51
TMEM88B-201ENST00000378821 ABCC4O15439 1325 aa24.51■■□□□ 1.51
TMEM88B-201ENST00000378821 BBOX1O75936 387 aa24.5■■□□□ 1.51
TMEM88B-201ENST00000378821 HCLS1P14317 486 aaPredicted RBP24.5■■□□□ 1.51
TMEM88B-201ENST00000378821 VPS33BQ9H267 617 aa24.5■■□□□ 1.51
TMEM88B-201ENST00000378821 HTRA3P83110 453 aa24.49■■□□□ 1.51
TMEM88B-201ENST00000378821 SLC51AQ86UW1 340 aa24.49■■□□□ 1.51
TMEM88B-201ENST00000378821 C8orf58Q8NAV2 365 aa24.49■■□□□ 1.51
TMEM88B-201ENST00000378821 KLRG1Q96E93 195 aa24.49■■□□□ 1.51
TMEM88B-201ENST00000378821 RTFDC1Q9BY42 306 aaPredicted RBP24.49■■□□□ 1.51
TMEM88B-201ENST00000378821 TAF1DQ9H5J8 278 aaPredicted RBP24.49■■□□□ 1.51
TMEM88B-201ENST00000378821 CHADLQ6NUI6 762 aa24.48■■□□□ 1.51
TMEM88B-201ENST00000378821 GPC2Q8N158 579 aa24.48■■□□□ 1.51
TMEM88B-201ENST00000378821 JMYQ8N9B5 988 aa24.48■■□□□ 1.51
TMEM88B-201ENST00000378821 JDP2Q8WYK2 163 aa24.48■■□□□ 1.51
TMEM88B-201ENST00000378821 ADAMTSL1Q8N6G6 1762 aa24.47■■□□□ 1.51
TMEM88B-201ENST00000378821 SP8Q8IXZ3 490 aa24.47■■□□□ 1.51
TMEM88B-201ENST00000378821 FAM9BQ8IZU0 186 aa24.47■■□□□ 1.51
TMEM88B-201ENST00000378821 CHMP4AQ9BY43 222 aa24.47■■□□□ 1.51
TMEM88B-201ENST00000378821 POTEIP0CG38 1075 aa24.46■■□□□ 1.51
TMEM88B-201ENST00000378821 POTEJP0CG39 1038 aa24.46■■□□□ 1.51
TMEM88B-201ENST00000378821 TAF1P21675 1872 aa24.45■■□□□ 1.51
TMEM88B-201ENST00000378821 SF3B3Q15393 1217 aaKnown RBP24.45■■□□□ 1.5
TMEM88B-201ENST00000378821 LDHDQ86WU2 507 aa24.45■■□□□ 1.5
TMEM88B-201ENST00000378821 WWC1Q8IX03 1113 aa24.45■■□□□ 1.5
TMEM88B-201ENST00000378821 PHAXQ9H814 394 aaKnown RBP24.45■■□□□ 1.5
TMEM88B-201ENST00000378821 LRRC37AA6NMS7 1700 aa24.44■■□□□ 1.5
TMEM88B-201ENST00000378821 ATP5J2-PTCD1G3V325 749 aa24.44■■□□□ 1.5
TMEM88B-201ENST00000378821 ELL2O00472 640 aaPredicted RBP24.44■■□□□ 1.5
TMEM88B-201ENST00000378821 GRAPQ13588 217 aa24.44■■□□□ 1.5
TMEM88B-201ENST00000378821 DDX46Q7L014 1031 aaKnown RBP24.44■■□□□ 1.5
TMEM88B-201ENST00000378821 TMC4Q7Z404 712 aa24.44■■□□□ 1.5
TMEM88B-201ENST00000378821 GRAPLQ8TC17 118 aaPredicted RBP24.44■■□□□ 1.5
TMEM88B-201ENST00000378821 HACL1Q9UJ83 578 aa24.44■■□□□ 1.5
TMEM88B-201ENST00000378821 TCERG1O14776 1098 aaKnown RBP24.43■■□□□ 1.5
TMEM88B-201ENST00000378821 LARGE2Q8N3Y3 721 aa24.43■■□□□ 1.5
TMEM88B-201ENST00000378821 FAM89AQ96GI7 184 aa24.43■■□□□ 1.5
TMEM88B-201ENST00000378821 TMX4Q9H1E5 349 aaPredicted RBP24.43■■□□□ 1.5
TMEM88B-201ENST00000378821 IL16Q14005 1332 aa24.42■■□□□ 1.5
TMEM88B-201ENST00000378821 CCDC30Q5VVM6 783 aa24.42■■□□□ 1.5
TMEM88B-201ENST00000378821 DIEXFQ68CQ4 756 aaKnown RBP24.42■■□□□ 1.5
TMEM88B-201ENST00000378821 TSPYL6Q8N831 410 aa24.42■■□□□ 1.5
TMEM88B-201ENST00000378821 SUPT20HQ8NEM7 779 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms